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Lsi10G011310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G011310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase
Genome locationchr10:15576270..15577455
RNA-Seq ExpressionLsi10G011310
SyntenyLsi10G011310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061739.1 hypothetical protein E6C27_scaffold212G001140 [Cucumis melo var. makuwa]2.2e-3893.02Show/hide
Query:  VAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        V +TMRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  VAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

KAG7010323.1 hypothetical protein SDJN02_27116, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-4480.34Show/hide
Query:  MASRPLQFQECLKFWSASY--------FGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDE
        MASRPLQFQE LKFWS            G V +TMRQQGQY DSGL SYSVSQMH VPSQ +EQSHPDPFEGRLEAFTPERE+SY+ASKNEDQWRWERDE
Subjt:  MASRPLQFQECLKFWSASY--------FGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDE

Query:  SKMPNSMASHMFNEGKH
        SKMPNSMASHMFNEGKH
Subjt:  SKMPNSMASHMFNEGKH

TYJ96079.1 hypothetical protein E5676_scaffold182G00380 [Cucumis melo var. makuwa]6.5e-4687.96Show/hide
Query:  MASRPLQFQECLKFWSASYFGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMA
        MASRPLQFQECL FW      SV +TMRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM 
Subjt:  MASRPLQFQECLKFWSASYFGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMA

Query:  SHMFNEGK
        SHMFNEG+
Subjt:  SHMFNEGK

XP_008449603.1 PREDICTED: uncharacterized protein LOC103491440 [Cucumis melo]4.2e-3795.12Show/hide
Query:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

XP_031744069.1 uncharacterized protein LOC101221687 isoform X2 [Cucumis sativus]4.2e-3795.12Show/hide
Query:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

TrEMBL top hitse value%identityAlignment
A0A0A0KI70 Uncharacterized protein2.0e-3795.12Show/hide
Query:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

A0A1S3BME9 uncharacterized protein LOC1034914402.0e-3795.12Show/hide
Query:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

A0A5A7V7U3 Uncharacterized protein1.1e-3893.02Show/hide
Query:  VAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        V +TMRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM SHMFNEG+
Subjt:  VAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

A0A5D3BAP0 Uncharacterized protein3.1e-4687.96Show/hide
Query:  MASRPLQFQECLKFWSASYFGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMA
        MASRPLQFQECL FW      SV +TMRQQGQYSDSGL +YSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSM 
Subjt:  MASRPLQFQECLKFWSASYFGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMA

Query:  SHMFNEGK
        SHMFNEG+
Subjt:  SHMFNEGK

A0A6J1DFR7 uncharacterized protein LOC1110206627.7e-3793.9Show/hide
Query:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MRQQGQYSDSG++SYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRW+RDESKM NSMASHMFNEG+
Subjt:  MRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22040.1 unknown protein3.2e-1144.58Show/hide
Query:  MRQQGQYSDSG-LSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MR+QG ++DS   S+Y   Q        ++  H D F+G+LEAFTPER+  Y  S+ E QWRWERD   M   MA+ ++NEG+
Subjt:  MRQQGQYSDSG-LSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

AT5G22040.2 unknown protein3.2e-1144.58Show/hide
Query:  MRQQGQYSDSG-LSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MR+QG ++DS   S+Y   Q        ++  H D F+G+LEAFTPER+  Y  S+ E QWRWERD   M   MA+ ++NEG+
Subjt:  MRQQGQYSDSG-LSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK

AT5G22040.3 unknown protein3.2e-1144.58Show/hide
Query:  MRQQGQYSDSG-LSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK
        MR+QG ++DS   S+Y   Q        ++  H D F+G+LEAFTPER+  Y  S+ E QWRWERD   M   MA+ ++NEG+
Subjt:  MRQQGQYSDSG-LSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFNEGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATCTGGATATGGCGTCACGGCCACTTCAGTTTCAAGAATGCTTAAAATTTTGGTCTGCTAGTTACTTTGGTTCGGTGGCCATAACTATGAGACAGCAGGGGCA
ATATTCTGATTCAGGACTAAGCTCATATTCAGTTTCTCAAATGCATCACGTTCCCAGTCAAATGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGCTGGAAGCCT
TCACTCCAGAGAGAGAGCATTCATATGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAATTCTATGGCCTCTCACATGTTCAAT
GAAGGCAAGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTATCTGGATATGGCGTCACGGCCACTTCAGTTTCAAGAATGCTTAAAATTTTGGTCTGCTAGTTACTTTGGTTCGGTGGCCATAACTATGAGACAGCAGGGGCA
ATATTCTGATTCAGGACTAAGCTCATATTCAGTTTCTCAAATGCATCACGTTCCCAGTCAAATGGTGGAACAAAGCCACCCTGATCCTTTTGAAGGACGGCTGGAAGCCT
TCACTCCAGAGAGAGAGCATTCATATGTAGCTTCAAAAAATGAGGATCAATGGAGATGGGAAAGAGATGAGTCGAAGATGCCAAATTCTATGGCCTCTCACATGTTCAAT
GAAGGCAAGCATTAATAGCGTGTGTATTGCATCCATCACTTGTTTACGTACTACATGCGACATATTCTCCTGACACTAATAGTTGCTTGCACCTGTTTTCCTCGGAAGTT
TACTTTCCAGTTGTAGATTACAATACCCTTTTTCTAGGCGATGTAAAATAAACCATATTAGGTACTTGTTTATTGAAATCAATTTCAACATTCTTTAATTC
Protein sequenceShow/hide protein sequence
MKYLDMASRPLQFQECLKFWSASYFGSVAITMRQQGQYSDSGLSSYSVSQMHHVPSQMVEQSHPDPFEGRLEAFTPEREHSYVASKNEDQWRWERDESKMPNSMASHMFN
EGKH