; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G011440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G011440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationchr10:15759965..15761016
RNA-Seq ExpressionLsi10G011440
SyntenyLsi10G011440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061725.1 hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa]4.1e-3576.67Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEE--GGLEEIITRSMMLVGCRGCFMYVMLTEKSS
        MSKRSRSS   EAEVEL+VNLN+SPTTSSSS SVS+FGGSGSGS            G+SCLSCE E++  G LEEIITRSMMLVGC GCFMYVMLTEKSS
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEE--GGLEEIITRSMMLVGCRGCFMYVMLTEKSS

Query:  QCPKCKNNVFLDFFKQQPNH
        QCPKCKNNVFLDFFKQQP H
Subjt:  QCPKCKNNVFLDFFKQQPNH

KAG6570472.1 NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2365.52Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGL-EEIITRSMMLVGCRGCFMYVMLTEKSSQ
        MSKRSRSS   E +VEL+VNLNR P+ ++SS              S SGSSS+IS+ NSCL      EGG+ EEIITRSMMLVGC GCFMYVMLTEKSSQ
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGL-EEIITRSMMLVGCRGCFMYVMLTEKSSQ

Query:  CPKCKNNVFLDFFKQQ
        CPKC NNVFLDFFK Q
Subjt:  CPKCKNNVFLDFFKQQ

KAG6605971.1 hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2858.78Show/hide
Query:  HISSFLIPFSLSLPFFTFFLSHFQITHYKMSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGL
        H+  FLIP SL+L  FT    +      KMSKR RSS   E EV L+V++NRSPTTS    S+S FGGS SG G      S++S+ +SCLS    E    
Subjt:  HISSFLIPFSLSLPFFTFFLSHFQITHYKMSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGL

Query:  EEIITRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPNHA
        E I+TRSMMLVGC GCFMYVMLT+KSSQCPKCKNNVFLDFF QQ +HA
Subjt:  EEIITRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPNHA

KAG7035922.1 hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-2563.87Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC
        MSKR RSS   E EV L+V++NRSPTTS    S+S FGGS SG G      S++S+ +SCLS    E    E I+TRSMMLVGC GCFMYVMLT+KSSQC
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC

Query:  PKCKNNVFLDFFKQQPNHA
        PKCKNNVFLDFF QQ +HA
Subjt:  PKCKNNVFLDFFKQQPNHA

KGN48041.1 hypothetical protein Csa_002820 [Cucumis sativus]3.6e-3982.5Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGG-LEEIITRSMMLVGCRGCFMYVMLTEKSSQ
        MSKRSRSS   EAEVEL+VNLNRSPT SSSS SVS+F GSGSG       SSEIS+GNSCLSCE EE GG LEEIITRSMMLVGC GCFMYVMLTEKSSQ
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGG-LEEIITRSMMLVGCRGCFMYVMLTEKSSQ

Query:  CPKCKNNVFLDFFKQQPNHA
        CPKCKNNVFLDFFKQQP+HA
Subjt:  CPKCKNNVFLDFFKQQPNHA

TrEMBL top hitse value%identityAlignment
A0A0A0KJX5 Uncharacterized protein1.7e-3982.5Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGG-LEEIITRSMMLVGCRGCFMYVMLTEKSSQ
        MSKRSRSS   EAEVEL+VNLNRSPT SSSS SVS+F GSGSG       SSEIS+GNSCLSCE EE GG LEEIITRSMMLVGC GCFMYVMLTEKSSQ
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGG-LEEIITRSMMLVGCRGCFMYVMLTEKSSQ

Query:  CPKCKNNVFLDFFKQQPNHA
        CPKCKNNVFLDFFKQQP+HA
Subjt:  CPKCKNNVFLDFFKQQPNHA

A0A0L9V640 Uncharacterized protein4.9e-1044.92Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC
        MSKR+RS         L+V+LN SP  ++SS S S      S S S S   S  S+ +SC+SCE EE        TR+M+LVGC  C MYVML+E   +C
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC

Query:  PKCKNNVFLDFFKQQPNH
        PKCK+ V LDF   + N+
Subjt:  PKCKNNVFLDFFKQQPNH

A0A0S3SBW0 Uncharacterized protein4.9e-1044.92Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC
        MSKR+RS         L+V+LN SP  ++SS S S      S S S S   S  S+ +SC+SCE EE        TR+M+LVGC  C MYVML+E   +C
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC

Query:  PKCKNNVFLDFFKQQPNH
        PKCK+ V LDF   + N+
Subjt:  PKCKNNVFLDFFKQQPNH

A0A1S3VZ34 uncharacterized protein LOC1067799134.9e-1044.92Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC
        MSKR+RS         L+V+LN SP  ++SS S S      S S S S   S  S+ +SC+SCE EE        TR+M+LVGC  C MYVML+E   +C
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC

Query:  PKCKNNVFLDFFKQQPNH
        PKCK+ V LDF   + N+
Subjt:  PKCKNNVFLDFFKQQPNH

A0A5D3BBS4 Uncharacterized protein2.0e-3576.67Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEE--GGLEEIITRSMMLVGCRGCFMYVMLTEKSS
        MSKRSRSS   EAEVEL+VNLN+SPTTSSSS SVS+FGGSGSGS            G+SCLSCE E++  G LEEIITRSMMLVGC GCFMYVMLTEKSS
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEE--GGLEEIITRSMMLVGCRGCFMYVMLTEKSS

Query:  QCPKCKNNVFLDFFKQQPNH
        QCPKCKNNVFLDFFKQQP H
Subjt:  QCPKCKNNVFLDFFKQQPNH

SwissProt top hitse value%identityAlignment
Q9FMS4 Protein salt-induced and EIN3/EIL1-dependent 12.3e-0440.3Show/hide
Query:  SRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLT-EKSSQCPKCKNNVFLDF
        S S  SS ++  +S   C  E EGG  E   +SM++VGC  C MY++ + E   +CP+C ++V LDF
Subjt:  SRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLT-EKSSQCPKCKNNVFLDF

Q9FNI1 Protein GL2-INTERACTING REPRESSOR 12.0e-0840.74Show/hide
Query:  ELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCE-REEEGGLEEII---TRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDF
        +L++ LN SP TSS    V         S SRS ++S  S  +SC+S E  ++E  +       T SM+LVGC  C MYVML+E   +CPKCK+ V LDF
Subjt:  ELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCE-REEEGGLEEII---TRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDF

Query:  FKQQPNHA
          +   +A
Subjt:  FKQQPNHA

Q9SRN4 Protein GL2-INTERACTING REPRESSOR 27.5e-0836.84Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC
        MS+R+++      ++EL++NL+  P+ +S    V            RS + S  +  +SC+S E  +E    E IT SM+LVGC  C MYVML++   +C
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC

Query:  PKCKNNVFLDFFKQ
        PKCK+ V LDF ++
Subjt:  PKCKNNVFLDFFKQ

Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein5.3e-0936.84Show/hide
Query:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC
        MS+R+++      ++EL++NL+  P+ +S    V            RS + S  +  +SC+S E  +E    E IT SM+LVGC  C MYVML++   +C
Subjt:  MSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLTEKSSQC

Query:  PKCKNNVFLDFFKQ
        PKCK+ V LDF ++
Subjt:  PKCKNNVFLDFFKQ

AT5G06270.1 unknown protein1.4e-0940.74Show/hide
Query:  ELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCE-REEEGGLEEII---TRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDF
        +L++ LN SP TSS    V         S SRS ++S  S  +SC+S E  ++E  +       T SM+LVGC  C MYVML+E   +CPKCK+ V LDF
Subjt:  ELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCE-REEEGGLEEII---TRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDF

Query:  FKQQPNHA
          +   +A
Subjt:  FKQQPNHA

AT5G22270.1 unknown protein1.6e-0540.3Show/hide
Query:  SRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLT-EKSSQCPKCKNNVFLDF
        S S  SS ++  +S   C  E EGG  E   +SM++VGC  C MY++ + E   +CP+C ++V LDF
Subjt:  SRSGSSSEISMGNSCLSCEREEEGGLEEIITRSMMLVGCRGCFMYVMLT-EKSSQCPKCKNNVFLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTAGGTTTGAATCATATCTCTTCCTTTTTAATTCCCTTTTCCCTCTCCCTTCCTTTCTTCACTTTTTTTCTTTCTCACTTCCAAATCACACATTATAAAATGAG
CAAGAGATCCAGATCAAGTAGCGAGGTGGAGGCGGAGGTGGAGTTGAAAGTGAACTTGAACCGGTCGCCAACGACGTCGTCTTCGTCTTGGTCGGTGAGCTCATTTGGAG
GGTCGGGGTCGGGTTCAGGGTCGAGGTCTGGATCGTCATCGGAGATATCGATGGGGAATTCGTGCTTGTCGTGTGAAAGGGAAGAAGAAGGTGGATTGGAAGAGATAATA
ACAAGATCAATGATGCTTGTGGGATGTCGGGGGTGCTTCATGTACGTGATGTTGACAGAGAAAAGCTCTCAATGCCCAAAATGCAAGAACAATGTGTTTCTTGATTTCTT
CAAGCAACAACCAAATCATGCCTAG
mRNA sequenceShow/hide mRNA sequence
AGGGGGCCCCCCTCTCTGATTATTATTTAGTTTTGTGTGATGCAGTTAGGTTTGAATCATATCTCTTCCTTTTTAATTCCCTTTTCCCTCTCCCTTCCTTTCTTCACTTT
TTTTCTTTCTCACTTCCAAATCACACATTATAAAATGAGCAAGAGATCCAGATCAAGTAGCGAGGTGGAGGCGGAGGTGGAGTTGAAAGTGAACTTGAACCGGTCGCCAA
CGACGTCGTCTTCGTCTTGGTCGGTGAGCTCATTTGGAGGGTCGGGGTCGGGTTCAGGGTCGAGGTCTGGATCGTCATCGGAGATATCGATGGGGAATTCGTGCTTGTCG
TGTGAAAGGGAAGAAGAAGGTGGATTGGAAGAGATAATAACAAGATCAATGATGCTTGTGGGATGTCGGGGGTGCTTCATGTACGTGATGTTGACAGAGAAAAGCTCTCA
ATGCCCAAAATGCAAGAACAATGTGTTTCTTGATTTCTTCAAGCAACAACCAAATCATGCCTAGCTATATCCTAATTATTATTATTATTAATTACTATTATAAGTACTCT
TTTTTATCAATTCTCATCATATTTCTTAACTTAATCAAGTTGCATCCTTCAATATTATTCCCATTAATTTTCTATGTTTTTCTTTTTTTTTAAAAAAAAAATTGCGTTTG
GTTGGTGTGGATTCTTATTACATATATAATGTTGGCCAACATGAAACCTAGGATTAACATTCTGTATGAATTTGCTGAAATTTCACTCTCTCTTTCTCTCTCTCTCCATA
TGTTCTTGTGTCTTGCCGTTGTTGACATTAATTAACATGCAGCTGTGTTTCTGTGTTTTTATCAGTATGTAATGGATAAATGCGATCCATACACATTATTACACCAAGTG
TTCCAGAAGTATTTATTCCAAAAAAAGAAAGATATGGTTCATAGTTTTGAATTATTACATATATTAAAAAGAAGAATTTATATC
Protein sequenceShow/hide protein sequence
MQLGLNHISSFLIPFSLSLPFFTFFLSHFQITHYKMSKRSRSSSEVEAEVELKVNLNRSPTTSSSSWSVSSFGGSGSGSGSRSGSSSEISMGNSCLSCEREEEGGLEEII
TRSMMLVGCRGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPNHA