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Lsi10G011830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G011830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncytochrome-c oxidases;electron carriers
Genome locationchr10:16102909..16104074
RNA-Seq ExpressionLsi10G011830
SyntenyLsi10G011830
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039296 - Predicted cytochrome c oxidase subunit VII
IPR039297 - Cytochrome c oxidase subunit VII


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESQ55275.1 hypothetical protein EUTSA_v10026571mg [Eutrema salsugineum]8.1e-1765.33Show/hide
Query:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIVCLPLSPVKVEESTICRTGLERKNE
        E PFRPREKL+EKQR FQ+IH+HTYLKGP+DKITSVAIPIALAASSL++I+C  ++  + + ST CR    R+N+
Subjt:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIVCLPLSPVKVEESTICRTGLERKNE
KAE8646907.1 hypothetical protein Csa_021033 [Cucumis sativus]1.2e-2068.54Show/hide
Query:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIV-------CLPLSPV---KVEESTICRTGLERKNE
        M EVEQPFRPREKL+EKQ+ FQ+IHKHTYLKGP+DKITSVAIPIALAASSL+LI+       C+ L  V   + EE T CRT L RKNE
Subjt:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIV-------CLPLSPV---KVEESTICRTGLERKNE
XP_004145797.1 uncharacterized protein LOC101208002 [Cucumis sativus]1.8e-1687.04Show/hide
Query:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        M EVEQPFRPREKL+EKQ+ FQ+IHKHTYLKGP+DKITSVAIPIALAASSL+LI
Subjt:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
XP_008458612.1 PREDICTED: uncharacterized protein LOC103497961 [Cucumis melo]2.1e-1788.89Show/hide
Query:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        M EVEQPFRPREKL+EKQ+YFQ+IHKHTYLKGP+DKITSVAIPIALAASSL+LI
Subjt:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
XP_038900874.1 uncharacterized protein LOC120087933 [Benincasa hispida]4.3e-1892.59Show/hide
Query:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        MTEVEQPFRPREKLIEKQ+YFQ+IHKHTYLKGP+DKITSVAIPIALAASSL+LI
Subjt:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
TrEMBL top hitse value%identityAlignment
A0A0A0KDL3 Uncharacterized protein8.7e-1787.04Show/hide
Query:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        M EVEQPFRPREKL+EKQ+ FQ+IHKHTYLKGP+DKITSVAIPIALAASSL+LI
Subjt:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
A0A1S3C9H3 uncharacterized protein LOC1034979611.0e-1788.89Show/hide
Query:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        M EVEQPFRPREKL+EKQ+YFQ+IHKHTYLKGP+DKITSVAIPIALAASSL+LI
Subjt:  MTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
A0A2N9FJX5 Uncharacterized protein1.1e-1687.27Show/hide
Query:  MTEV-EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        MTEV EQPFRPREKL+EKQ+YFQNIHKHTYLKGP D+ITSVAIPIALAA+SLF+I
Subjt:  MTEV-EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
A0A6J1JFD4 uncharacterized protein LOC1114839071.5e-1694Show/hide
Query:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        EQPFRPREKLIEKQ+YFQ+IHKHTYLKGP+DKITSVAIPIALAASSLFLI
Subjt:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
V4LX74 Uncharacterized protein3.9e-1765.33Show/hide
Query:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIVCLPLSPVKVEESTICRTGLERKNE
        E PFRPREKL+EKQR FQ+IH+HTYLKGP+DKITSVAIPIALAASSL++I+C  ++  + + ST CR    R+N+
Subjt:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIVCLPLSPVKVEESTICRTGLERKNE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21105.1 cytochrome-c oxidases;electron carriers6.6e-1782Show/hide
Query:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
        E PFRPREKL+EKQR FQ+I +HTYLKGP+DKITSVAIPIALAASSL++I
Subjt:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLI
AT4G21105.2 cytochrome-c oxidases;electron carriers1.9e-1176.92Show/hide
Query:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIP
        E PFRPREKL+EKQR FQ+I +HTYLKGP+DKITS+ IP
Subjt:  EQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGATATTGGTGGAAGTTTCAAGTACCGTTCTGTTCGAGCATTGAGTCGCACAATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCA
AAGATATTTCCAGAACATCCACAAGCACACTTATCTTAAAGGGCCAATCGATAAAATCACCTCTGTTGCCATTCCCATTGCTCTTGCAGCTTCATCACTGTTTCTTATCG
TATGTTTACCCCTCTCTCCAGTGAAGGTCGAGGAATCTACAATATGTCGCACGGGATTGGAAAGAAAGAATGAGGTCACTGTCTTTGCATCTAGATTTCAAACACTGTTG
TGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGATATTGGTGGAAGTTTCAAGTACCGTTCTGTTCGAGCATTGAGTCGCACAATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCA
AAGATATTTCCAGAACATCCACAAGCACACTTATCTTAAAGGGCCAATCGATAAAATCACCTCTGTTGCCATTCCCATTGCTCTTGCAGCTTCATCACTGTTTCTTATCG
TATGTTTACCCCTCTCTCCAGTGAAGGTCGAGGAATCTACAATATGTCGCACGGGATTGGAAAGAAAGAATGAGGTCACTGTCTTTGCATCTAGATTTCAAACACTGTTG
TGCTTCTAGACCCATGTGAATTTTGTTCTTGAAGCAATTTTTGTTTAATAAATGCTTAGTTCCAGATTCGGCTACTAGTAGAATACTGGATATGATGCTCAGCTTTCTCC
TGCGTTTCTCCATATTTTAACTGTTTGTCTCAGTTTTCCTTTCATGAAATTGTGACTCAGAGGATATGTTTTGGGATCTTGAAATGAAATAGTGTACCTATTAGAATTGT
TAAGACTTGGTTTTACTTTTACCTCAACATTTTCACCTGTTCATGGACATGAAGTATGAATAAATAGTTTCATTACATC
Protein sequenceShow/hide protein sequence
MLDIGGSFKYRSVRALSRTMTEVEQPFRPREKLIEKQRYFQNIHKHTYLKGPIDKITSVAIPIALAASSLFLIVCLPLSPVKVEESTICRTGLERKNEVTVFASRFQTLL
CF