CuGenDBv2

Gene ID	Lsi10G011840
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	cytochrome-c oxidases;electron carriers
Genome location	chr10:16105056..16107186
RNA-Seq Expression	Lsi10G011840
Synteny	Lsi10G011840
Gene Ontology terms	GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039296 - Predicted cytochrome c oxidase subunit VII IPR039297 - Cytochrome c oxidase subunit VII

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033384.1 Histidine-containing phosphotransfer protein 1 [Cucumis melo var. makuwa]

5.3e-29

97.14

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Query:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTE  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

KAE8646907.1 hypothetical protein Csa_021033 [Cucumis sativus]

4.8e-30

73.15

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Query:  ILSSSPRASQNSSSIIRPIS-GSLRTTIRRSPETSKFMMTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNM
        +L++SP  ++       P S  +  TT+  SP+T KF MTE  EQPFRPREKLIERQK FQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNM
Subjt:  ILSSSPRASQNSSSIIRPIS-GSLRTTIRRSPETSKFMMTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNM

Query:  SHGIGKKE
        SHGIGKKE
Subjt:  SHGIGKKE

KAG6570497.1 hypothetical protein SDJN03_29412, partial [Cucurbita argyrosperma subsp. sororia]

5.3e-29

80.22

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Query:  RPISGSLRTTIRRSPETSKFMMTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        RP +    +TI RSPE        +TEQPFRPREKLIERQKYFQSI KHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  RPISGSLRTTIRRSPETSKFMMTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

XP_022957674.1 uncharacterized protein LOC111459140 isoform X1 [Cucurbita moschata]

4.5e-28

94.12

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Query:  EVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        ++TEQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  EVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

XP_038900908.1 uncharacterized protein LOC120087955 [Benincasa hispida]

3.7e-30

100

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Query:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBQ2 Uncharacterized protein

2.2e-28

95.71

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Query:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTE  EQPFRPREKLIERQK FQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A5A7SQB1 Histidine-containing phosphotransfer protein 1

2.6e-29

97.14

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Query:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTE  EQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1H2N1 uncharacterized protein LOC111459140 isoform X1

2.2e-28

94.12

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Query:  EVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        ++TEQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  EVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1K6C6 uncharacterized protein LOC111491558 isoform X2

3.7e-28

95.52

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Query:  VTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        +TEQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  VTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1K8A8 uncharacterized protein LOC111491558 isoform X1

2.2e-28

94.12

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Query:  EVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        ++TEQPFRPREKLIERQKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  EVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G21105.1 cytochrome-c oxidases;electron carriers

2.6e-26

80.6

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Query:  VTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        +TE PFRPREKL+E+Q+ FQSI +HTYLKGP+DK+TSVAIPIALAASSLY+IG GIYNMS+GIGKKE
Subjt:  VTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

AT4G21105.2 cytochrome-c oxidases;electron carriers

6.3e-12

70.73

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Query:  VTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIP
        +TE PFRPREKL+E+Q+ FQSI +HTYLKGP+DK+TS+ IP
Subjt:  VTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIP

Sequences

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CDS sequence

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mRNA sequence

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AAAAACGCGATATTGTCTTCTTCCCCTCGCGCATCGCAGAATTCATCGTCTATCATTCGCCCCATCAGCGGCAGCCTTCGGACAACGATTCGTCGCTCTCCTGAAACCTC
CAAATTCATGATGACTGAAGTCACTGAACAACCATTTAGGCCTCGTGAAAAACTTATTGAAAGGCAAAAGTATTTTCAGAGCATCCACAAGCACACATATCTTAAAGGGC
CATTGGATAAGGTCACCTCTGTTGCCATTCCAATCGCTTTGGCAGCTTCATCATTGTATCTTATAGGACGGGGGATTTATAACATGTCACATGGCATCGGAAAGAAAGAA
TGAGGTCAACAGTCTCTATGCGTCTTAATTTCAAAGAGTTTTTATGCTCTGGACCCATGTTAATTTTGTTATTATCTTTGTCTAATAATTGCTTAGTTGCAGACTCGGCT
ATCAATTGATTTGAATATCATTCTCAGATTCCTTGTGCATATTGGAATGGTTTGTCTCAGATTATTGTTTTTCTCATTTTTGAGAAATTATCTTGTTGAGTTTGCTTTCC
TGTGATCTGATTCTTATGGTGGTGCAAGTAACATATCCAGAATAGTTGTTTCTTTTTACTTT

Protein sequence

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KNAILSSSPRASQNSSSIIRPISGSLRTTIRRSPETSKFMMTEVTEQPFRPREKLIERQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

Lsi10G011840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome