CuGenDBv2

Gene ID	Lsi10G011870
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Stress-response A/B barrel domain-containing protein
Genome location	chr10:16135086..16136740
RNA-Seq Expression	Lsi10G011870
Synteny	Lsi10G011870
Gene Ontology terms	NA
InterPro domains	IPR011008 - Dimeric alpha-beta barrel IPR013097 - Stress responsive alpha-beta barrel IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like

Homology

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GenBank top hits

e value

%identity

Alignment

BAD93607.1 hypothetical protein, partial [Cucumis melo]

4.0e-27

90.14

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIVVLDFPAIR KPP
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP

XP_008458618.1 PREDICTED: stress-response A/B barrel domain-containing protein At5g22580 [Cucumis melo]

4.0e-27

90.14

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIVVLDFPAIR KPP
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP

XP_022943456.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata]

2.4e-27

86.49

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA
        AVK  + GQE+EGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIV+LDFPAIRTKP P+A
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA

XP_022958177.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata]

3.1e-27

86.49

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAHSAF  HPKHVEFSA FSAAI+KIV+LDFPAIR KPPPSA
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA

XP_038901331.1 stress-response A/B barrel domain-containing protein At5g22580 [Benincasa hispida]

3.1e-27

90.14

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP
        AVK  + GQE+EGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIVVLDFPAIRTKPP
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB18 Stress-response A/B barrel domain-containing protein

2.0e-27

90.14

Show/hide

Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIVVLDFPAIR KPP
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP

A0A1S3C8U9 stress-response A/B barrel domain-containing protein At5g22580

2.0e-27

90.14

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIVVLDFPAIR KPP
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP

A0A5A7SVA5 Dimeric alpha-beta barrel

2.0e-27

90.14

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIVVLDFPAIR KPP
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPP

A0A6J1FRR7 stress-response A/B barrel domain-containing protein At5g22580-like

1.1e-27

86.49

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA
        AVK  + GQE+EGPEMLTQGFTHAFLMTFENKEAH+AFVGHPKHVEFSA FSAAIDKIV+LDFPAIRTKP P+A
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA

A0A6J1H156 stress-response A/B barrel domain-containing protein At5g22580-like

1.5e-27

86.49

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Query:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA
        AVK  + GQEMEGPEMLTQGFTHAFLMTFENKEAHSAF  HPKHVEFSA FSAAI+KIV+LDFPAIR KPPPSA
Subjt:  AVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTKPPPSA

SwissProt top hits

e value

%identity

Alignment

Q9FK81 Stress-response A/B barrel domain-containing protein At5g22580

2.0e-16

60.29

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Query:  VKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTK
        VK  + G++ E  +ML QGFTHAF MTFENK+ + AF  HP HVEFSA F+A IDKIV+LDFP    K
Subjt:  VKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTK

Q9LUV2 Stress-response A/B barrel domain-containing protein HS1

1.1e-08

51.02

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Query:  EMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDF
        E L QG+TH F  TFE+KEA + ++ HP HVEF+ IF  ++DK++V+D+
Subjt:  EMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDF

Arabidopsis top hits

e value

%identity

Alignment

AT3G17210.1 heat stable protein 1

8.2e-10

51.02

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Query:  EMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDF
        E L QG+TH F  TFE+KEA + ++ HP HVEF+ IF  ++DK++V+D+
Subjt:  EMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDF

AT5G22580.1 Stress responsive A/B Barrel Domain

1.4e-17

60.29

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Query:  VKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTK
        VK  + G++ E  +ML QGFTHAF MTFENK+ + AF  HP HVEFSA F+A IDKIV+LDFP    K
Subjt:  VKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIRTK

Sequences

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CDS sequence

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mRNA sequence

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ATGTTACTGCTAATCTTCTTGTCTAAAATAAACAGTATCATGACTCGATTGCTACAAGATATTGAGCAAGAGATGCTGTCGAGGAAGATAAGGGACAAGGACAACAATTC
TTTTATAGTATTTGAGTCAGCAGTGAAAAGAAATGACACGGGACAGGAAATGGAAGGTCCAGAGATGCTTACACAGGGCTTCACTCATGCCTTCTTGATGACATTCGAGA
ACAAGGAGGCTCACTCTGCGTTCGTGGGGCATCCCAAGCATGTTGAATTCTCTGCAATTTTCTCGGCAGCCATTGACAAGATTGTGGTGCTTGATTTCCCAGCTATTCGT
ACCAAGCCACCTCCATCAGCTTAAATATCAGCAATTGCCTCTTTGTGTTGGAAATGTAAAACCCCTTCATGATGAGTATTTTTATAATGGTACTACTGTTTGTTTTCCAA
CAAAGTGATTCCTTTTCTTTTCATAATTAAAATTTGCTACATTAGAATAGATGTGTACCGTTGGATCCATGTATTGTGATCGGAATTCCTGGATCCGCTGCAAAGCACGA
GCATAGATGTCTATCTCGATCCATCGATGAACTTGAAAGCCATTTTTACCTGTTTACTAAAATAATAATAATAATTGAAATTGCTAGCA

Protein sequence

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MLLLIFLSKINSIMTRLLQDIEQEMLSRKIRDKDNNSFIVFESAVKRNDTGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFVGHPKHVEFSAIFSAAIDKIVVLDFPAIR
TKPPPSA

Lsi10G011870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome