; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G011970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G011970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationchr10:16251842..16255943
RNA-Seq ExpressionLsi10G011970
SyntenyLsi10G011970
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003680 - AT DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif
IPR039605 - AT-hook motif nuclear-localized protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033371.1 AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa]3.6e-3144.76Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  N R FT+K ESP          +S   ADGEQRSIG+  I EE RL ESA G+ ++ KK +GRPRK D V+ +N      SSSADSQTI K  LG 
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR
        PPG GKLQ+LASLGGYAW+T GG  TPH++LVAP                                             EG+FEIL+LSGW   GD +K 
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR

Query:  ITVSLAKAKG
        +T+S +K+ G
Subjt:  ITVSLAKAKG

XP_008458631.1 PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo]3.6e-3144.76Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  N R FT+K ESP          +S   ADGEQRSIG+  I EE RL ESA G+ ++ KK +GRPRK D V+ +N      SSSADSQTI K  LG 
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR
        PPG GKLQ+LASLGGYAW+T GG  TPH++LVAP                                             EG+FEIL+LSGW   GD +K 
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR

Query:  ITVSLAKAKG
        +T+S +K+ G
Subjt:  ITVSLAKAKG

XP_008458632.1 PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X2 [Cucumis melo]1.5e-3756.63Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  N R FT+K ESP          +S   ADGEQRSIG+  I EE RL ESA G+ ++ KK +GRPRK D V+ +N      SSSADSQTI K  LG 
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGLFEILRLSGWFNGGDPLKRITVSLAKAKG
        PPG GKLQ+LASLGGYAW+T GG  TPH++LVAP EG+FEIL+LSGW   GD +K +T+S +K+ G
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGLFEILRLSGWFNGGDPLKRITVSLAKAKG

XP_022958437.1 AT-hook motif nuclear-localized protein 9-like [Cucurbita moschata]5.1e-2535.89Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYT-----AADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKN----SPQQSFSSSADSQ
        ++++    F+++ ++       + +L+S T     A+D E  SIGNS IV E  L E + GE+ISKKK+RGRPR+   +D +     S Q S SSSA+S+
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYT-----AADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKN----SPQQSFSSSADSQ

Query:  TISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGE---------------------------------------------GLFEILRLSG
          SKRRLGRPPGSG+LQLLASLGG+AWDT GGS TPH++ +  GE                                             G+FEILR++G
Subjt:  TISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGE---------------------------------------------GLFEILRLSG

Query:  WFNGGDPLKRITVSLAKAKGEALKKKSVMISSPRSKPSNGIVSSPIFA
         F G    KR  V           + S+ ++ P  +   G+V+S + A
Subjt:  WFNGGDPLKRITVSLAKAKGEALKKKSVMISSPRSKPSNGIVSSPIFA

XP_038900409.1 AT-hook motif nuclear-localized protein 9-like [Benincasa hispida]1.2e-5359.91Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  NGR FT+KCE PE +Q  INNLE+YTAAD EQRS G+ EIVEEK+LSESAD EIISKKKKRGRPRK D VD+K  PQQSF+SSADSQTISKRRLGR
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG---------------------------------------------EGLFEILRLSGWFNGGDPLK
         PG GKLQLLA LGGYAWD  GGS TPHVVLVAPG                                             EG FEIL+LSGWF GGD +K
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG---------------------------------------------EGLFEILRLSGWFNGGDPLK

Query:  RITVSLAKAKGE
        RI++S +K  G+
Subjt:  RITVSLAKAKGE

TrEMBL top hitse value%identityAlignment
A0A1S3C8A9 AT-hook motif nuclear-localized protein7.3e-3856.63Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  N R FT+K ESP          +S   ADGEQRSIG+  I EE RL ESA G+ ++ KK +GRPRK D V+ +N      SSSADSQTI K  LG 
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGLFEILRLSGWFNGGDPLKRITVSLAKAKG
        PPG GKLQ+LASLGGYAW+T GG  TPH++LVAP EG+FEIL+LSGW   GD +K +T+S +K+ G
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGLFEILRLSGWFNGGDPLKRITVSLAKAKG

A0A1S3C8E7 AT-hook motif nuclear-localized protein1.7e-3144.76Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  N R FT+K ESP          +S   ADGEQRSIG+  I EE RL ESA G+ ++ KK +GRPRK D V+ +N      SSSADSQTI K  LG 
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR
        PPG GKLQ+LASLGGYAW+T GG  TPH++LVAP                                             EG+FEIL+LSGW   GD +K 
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR

Query:  ITVSLAKAKG
        +T+S +K+ G
Subjt:  ITVSLAKAKG

A0A5D3B9V7 AT-hook motif nuclear-localized protein1.6e-2453.44Show/hide
Query:  SIGNSEIVEEKRLSESADGEIISKKKKRGRPRK-YDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGE
        SIG+ EI EE R  E   G  I  KK+RGRPRK  D V++ + P     S+ADSQT  +RR GRPPGSG  Q+LA+LGGYAW+T     TPHV++V PGE
Subjt:  SIGNSEIVEEKRLSESADGEIISKKKKRGRPRK-YDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGE

Query:  GLFEILRLSGWFNGGDPLKRITVSLAKAKGE
        G+FEILRL GWF+     K IT++ +K  G+
Subjt:  GLFEILRLSGWFNGGDPLKRITVSLAKAKGE

A0A5D3BDW3 AT-hook motif nuclear-localized protein1.7e-3144.76Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR
        ME  N R FT+K ESP          +S   ADGEQRSIG+  I EE RL ESA G+ ++ KK +GRPRK D V+ +N      SSSADSQTI K  LG 
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGR

Query:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR
        PPG GKLQ+LASLGGYAW+T GG  TPH++LVAP                                             EG+FEIL+LSGW   GD +K 
Subjt:  PPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPG--------------------------------------------EGLFEILRLSGWFNGGDPLKR

Query:  ITVSLAKAKG
        +T+S +K+ G
Subjt:  ITVSLAKAKG

A0A6J1H1U0 AT-hook motif nuclear-localized protein2.4e-2535.89Show/hide
Query:  MEALNGRKFTLKCESPEIRQGIINNLESYT-----AADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKN----SPQQSFSSSADSQ
        ++++    F+++ ++       + +L+S T     A+D E  SIGNS IV E  L E + GE+ISKKK+RGRPR+   +D +     S Q S SSSA+S+
Subjt:  MEALNGRKFTLKCESPEIRQGIINNLESYT-----AADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKN----SPQQSFSSSADSQ

Query:  TISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGE---------------------------------------------GLFEILRLSG
          SKRRLGRPPGSG+LQLLASLGG+AWDT GGS TPH++ +  GE                                             G+FEILR++G
Subjt:  TISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGE---------------------------------------------GLFEILRLSG

Query:  WFNGGDPLKRITVSLAKAKGEALKKKSVMISSPRSKPSNGIVSSPIFA
         F G    KR  V           + S+ ++ P  +   G+V+S + A
Subjt:  WFNGGDPLKRITVSLAKAKGEALKKKSVMISSPRSKPSNGIVSSPIFA

SwissProt top hitse value%identityAlignment
O80834 AT-hook motif nuclear-localized protein 91.7e-0746.91Show/hide
Query:  KKKRGRPRKYDVVDQKNSPQQSFSSSADS----QTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        K+KRGRPRKY    Q  S   + SSS+ S       +KR  GRPPGSGK Q +AS+G     ++G S TPHV+ V+ GE +
Subjt:  KKKRGRPRKYDVVDQKNSPQQSFSSSADS----QTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

Q8GXB3 AT-hook motif nuclear-localized protein 53.2e-0640.7Show/hide
Query:  KKKRGRPRKYDVVDQKN---------SPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        KKKRGRPRKY    Q +         S +   SSS       KR  GRPPG+G+ Q LA+LG +   + G +  PHV+ V  GE +
Subjt:  KKKRGRPRKYDVVDQKN---------SPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

Q8L7L5 AT-hook motif nuclear-localized protein 111.5e-0849.37Show/hide
Query:  SKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        S K+KRGRPRKY       S   S S S  S   +KR  GRPPGSGK Q L+S+G     +TG S TPHV++V+ GE +
Subjt:  SKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

Q8LPN5 AT-hook motif nuclear-localized protein 127.1e-0640.26Show/hide
Query:  KKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        K+KRGRPRKY      N  + S   S  ++   KR  GRPPG+G+ Q LA+LG +   + G +  PHV+ +  GE +
Subjt:  KKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

Arabidopsis top hitse value%identityAlignment
AT1G63470.1 AT hook motif DNA-binding family protein2.3e-0740.7Show/hide
Query:  KKKRGRPRKYDVVDQKN---------SPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        KKKRGRPRKY    Q +         S +   SSS       KR  GRPPG+G+ Q LA+LG +   + G +  PHV+ V  GE +
Subjt:  KKKRGRPRKYDVVDQKN---------SPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

AT1G63480.1 AT hook motif DNA-binding family protein5.1e-0740.26Show/hide
Query:  KKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        K+KRGRPRKY      N  + S   S  ++   KR  GRPPG+G+ Q LA+LG +   + G +  PHV+ +  GE +
Subjt:  KKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

AT2G45850.1 AT hook motif DNA-binding family protein1.2e-0846.91Show/hide
Query:  KKKRGRPRKYDVVDQKNSPQQSFSSSADS----QTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        K+KRGRPRKY    Q  S   + SSS+ S       +KR  GRPPGSGK Q +AS+G     ++G S TPHV+ V+ GE +
Subjt:  KKKRGRPRKYDVVDQKNSPQQSFSSSADS----QTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

AT2G45850.2 AT hook motif DNA-binding family protein1.2e-0846.91Show/hide
Query:  KKKRGRPRKYDVVDQKNSPQQSFSSSADS----QTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        K+KRGRPRKY    Q  S   + SSS+ S       +KR  GRPPGSGK Q +AS+G     ++G S TPHV+ V+ GE +
Subjt:  KKKRGRPRKYDVVDQKNSPQQSFSSSADS----QTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL

AT3G61310.1 AT hook motif DNA-binding family protein1.1e-0949.37Show/hide
Query:  SKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL
        S K+KRGRPRKY       S   S S S  S   +KR  GRPPGSGK Q L+S+G     +TG S TPHV++V+ GE +
Subjt:  SKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLLASLGGYAWDTTGGSLTPHVVLVAPGEGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTCTAAATGGCAGAAAGTTCACGTTGAAATGTGAATCGCCGGAGATTCGGCAAGGCATCATTAATAATCTCGAGAGTTATACGGCGGCGGACGGCGAACAGAG
GTCGATCGGAAATAGCGAAATCGTCGAGGAAAAGAGACTTAGTGAATCGGCCGACGGGGAGATAATTTCGAAGAAAAAGAAAAGAGGAAGGCCGAGGAAATACGATGTCG
TCGACCAGAAAAATTCGCCGCAGCAGAGCTTTTCTTCGTCCGCCGATTCACAAACCATTTCGAAACGCCGGCTTGGCCGCCCCCCTGGTAGCGGTAAATTGCAGCTTCTC
GCATCGTTAGGCGGTTATGCTTGGGACACAACCGGTGGAAGTTTAACCCCTCACGTTGTTCTTGTTGCACCAGGAGAGGGTCTGTTCGAGATTTTGCGTCTGTCGGGATG
GTTTAATGGAGGAGATCCATTGAAACGTATTACTGTTTCACTCGCTAAAGCTAAAGGCGAAGCACTGAAGAAGAAATCTGTAATGATCTCATCTCCTCGCTCTAAACCAT
CAAACGGCATCGTTTCTTCTCCAATTTTTGCCCACATATTTTCCAAATATCCACATTTTCCCTAA
mRNA sequenceShow/hide mRNA sequence
CAGTTTCAAAACAGAGCATTACTCTGGTAACCAATAGACCATTCATTCTTGAAGTTCTTTTCCATGGAGGCTCTAAATGGCAGAAAGTTCACGTTGAAATGTGAATCGCC
GGAGATTCGGCAAGGCATCATTAATAATCTCGAGAGTTATACGGCGGCGGACGGCGAACAGAGGTCGATCGGAAATAGCGAAATCGTCGAGGAAAAGAGACTTAGTGAAT
CGGCCGACGGGGAGATAATTTCGAAGAAAAAGAAAAGAGGAAGGCCGAGGAAATACGATGTCGTCGACCAGAAAAATTCGCCGCAGCAGAGCTTTTCTTCGTCCGCCGAT
TCACAAACCATTTCGAAACGCCGGCTTGGCCGCCCCCCTGGTAGCGGTAAATTGCAGCTTCTCGCATCGTTAGGCGGTTATGCTTGGGACACAACCGGTGGAAGTTTAAC
CCCTCACGTTGTTCTTGTTGCACCAGGAGAGGGTCTGTTCGAGATTTTGCGTCTGTCGGGATGGTTTAATGGAGGAGATCCATTGAAACGTATTACTGTTTCACTCGCTA
AAGCTAAAGGCGAAGCACTGAAGAAGAAATCTGTAATGATCTCATCTCCTCGCTCTAAACCATCAAACGGCATCGTTTCTTCTCCAATTTTTGCCCACATATTTTCCAAA
TATCCACATTTTCCCTAAGGTTAATTCCTTATGTTCTCTCCTCTCACACACAAACGTTTACATTAGAAAGTAAAAGTTCACTGTAAAAGAATTCTGTTGGTGAATTTGTA
ATGAAGTTTTTCCAATTTCTAGACT
Protein sequenceShow/hide protein sequence
MEALNGRKFTLKCESPEIRQGIINNLESYTAADGEQRSIGNSEIVEEKRLSESADGEIISKKKKRGRPRKYDVVDQKNSPQQSFSSSADSQTISKRRLGRPPGSGKLQLL
ASLGGYAWDTTGGSLTPHVVLVAPGEGLFEILRLSGWFNGGDPLKRITVSLAKAKGEALKKKSVMISSPRSKPSNGIVSSPIFAHIFSKYPHFP