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Lsi10G012040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:16335324..16339311
RNA-Seq ExpressionLsi10G012040
SyntenyLsi10G012040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010680.1 hypothetical protein SDJN02_27475, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-0788.89Show/hide
Query:  VKLPPHRRFRKRPSAQGLPSQSSSPPVTIPGTKTTG
        VKLPPHRRFR  P AQGLPSQSSSPPVT+PGTKTTG
Subjt:  VKLPPHRRFRKRPSAQGLPSQSSSPPVTIPGTKTTG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAACTCCCACCCCACAGGCGCTTTCGAAAGAGGCCCTCGGCGCAGGGCTTGCCGTCCCAGAGCTCCAGCCCGCCGGTGACAATTCCAGGCACTAAAACGACTGG
GAGCTGTCAAGAAGGCAATACACGTGGTGAAATGAAAAGGAGAAGAGAGAGTAAATGGCCTGGTGGCCATGGATGGCTGAAGGTGTGCAGTAGGAAAAAAACAGGGGATG
TGAAAAGGAAAGAGAAAAAGAAGGGCTTCTGTTCTTCAACCCACAATGAGAAAGAAAAACGAAATGCTTTCTGCAAATTGATGAGGAAATGGGAATGGAGAATCCAAAGT
AACACATTTTGTTTGATCAAAATGACACTTGGCTCTGTTTCTGCATGGGCGCTTCATCAGACTATTTTTCAACGTTCGATAAACTCTATTTTTTAG
mRNA sequenceShow/hide mRNA sequence
CATACATTACCTCTATTTTACTCTTCAATCTGCTCAGGGCTCTGTCTCTAACCTGCGTGATTTCTCAGTTCAACTATGGCAAACCCAATGAAGAGATGATATATATATAT
GATTGCAAGAAGAAGACTGTTTCGGGTCACATACCTCTGTATTTTGGAAGGCGATCCTCCAATCATATGCAGCCATGTGCAAGTTCTTTCCATCATAACCAATTTTAGCC
AGATTTTCAATGAGAACAGCCCAAACGAAGTAGCCTTGGGCGAAATAATCAGCAGCCACAAGGCCTTCAACTGGCCGGACCCGAATGCCTGGTGGGTCAAGCCCTGTTTC
ATTGTCTAGAGACAGGTGCTCCAACCAGCATAGTGGTCTGAAAATTTGAATTCAAATTTTCAAATGGTGAAACTCCCACCCCACAGGCGCTTTCGAAAGAGGCCCTCGGC
GCAGGGCTTGCCGTCCCAGAGCTCCAGCCCGCCGGTGACAATTCCAGGCACTAAAACGACTGGGAGCTGTCAAGAAGGCAATACACGTGGTGAAATGAAAAGGAGAAGAG
AGAGTAAATGGCCTGGTGGCCATGGATGGCTGAAGGTGTGCAGTAGGAAAAAAACAGGGGATGTGAAAAGGAAAGAGAAAAAGAAGGGCTTCTGTTCTTCAACCCACAAT
GAGAAAGAAAAACGAAATGCTTTCTGCAAATTGATGAGGAAATGGGAATGGAGAATCCAAAGTAACACATTTTGTTTGATCAAAATGACACTTGGCTCTGTTTCTGCATG
GGCGCTTCATCAGACTATTTTTCAACGTTCGATAAACTCTATTTTTTAG
Protein sequenceShow/hide protein sequence
MVKLPPHRRFRKRPSAQGLPSQSSSPPVTIPGTKTTGSCQEGNTRGEMKRRRESKWPGGHGWLKVCSRKKTGDVKRKEKKKGFCSSTHNEKEKRNAFCKLMRKWEWRIQS
NTFCLIKMTLGSVSAWALHQTIFQRSINSIF