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Lsi10G012190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein, putative
Genome locationchr10:16472045..16474578
RNA-Seq ExpressionLsi10G012190
SyntenyLsi10G012190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145769.1 uncharacterized protein LOC101222012 [Cucumis sativus]4.8e-2892.75Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNL VA+GLIAFASAGL+FPFYMASSKKPVIDP KPL PQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_008465426.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo]5.7e-2994.2Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNL VA+GLIAFASAGL+FPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022140323.1 uncharacterized protein LOC111011024 [Momordica charantia]8.2e-2891.3Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+ VA GLIAFASAGL+FPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022944261.1 uncharacterized protein LOC111448766 [Cucurbita moschata]5.3e-2793.94Show/hide
Query:  RRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRN+ VA GLIAFASAGL+FPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_038900698.1 uncharacterized protein LOC120087838 [Benincasa hispida]3.7e-2894.2Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNL VAIGLIAFASAGL+FPFYMASSKKPVID AKPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
TrEMBL top hitse value%identityAlignment
A0A1S3CQB9 uncharacterized protein LOC1035030422.7e-2994.2Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNL VA+GLIAFASAGL+FPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1CHR8 uncharacterized protein LOC1110110244.0e-2891.3Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+ VA GLIAFASAGL+FPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1FTX8 uncharacterized protein LOC1114487662.6e-2793.94Show/hide
Query:  RRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRN+ VA GLIAFASAGL+FPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1JB19 uncharacterized protein LOC1114841577.5e-2792.42Show/hide
Query:  RRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        R+N+ VA GLIAFASAGL+FPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
G7JM87 Transmembrane protein, putative6.3e-2684.06Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRNL VA GL+AFASAG++FPFYMASSKKPVIDP KPL PQATFRGPYINTGSRD+GPDH+TY KK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22875.1 unknown protein5.1e-2881.16Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RN+ VA GL+ FASAGL+FPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
AT5G22875.2 unknown protein5.1e-2881.16Show/hide
Query:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RN+ VA GL+ FASAGL+FPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGGCGTCGGAATTTGACTGTTGCCATTGGGTTGATAGCCTTTGCATCTGCTGGATTATCATTTCCCTTTTACATGGCGTCTTCTAAAAAACCAGTTATAGATCC
GGCAAAGCCACTTCCTCCGCAGGCTACTTTTCGAGGTCCTTATATAAACACTGGTTCCCGAGACGTCGGACCTGACCATCAAACTTACACTAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAAAGGAAAAAGAAATTTGGGCATTTCGTTTCCACGCCGTGGGATTGTCCAAAGCTGAGCCTCTCAGATCAACAAATTCCGTATCGCTTCCCTTGTTTGCTCTTTGA
AGAAACTCCTCTTGAGTTCAATCGCTATCACTCTCAACCCCAAATCCTTTGGCCTTCTACAAATTTTCAAATCTACATGTGAAGGGAGTGTTACAGGATTGATATAATAT
TAAGATCACTCATAGAAAACTCGATGACACGGCGTCGGAATTTGACTGTTGCCATTGGGTTGATAGCCTTTGCATCTGCTGGATTATCATTTCCCTTTTACATGGCGTCT
TCTAAAAAACCAGTTATAGATCCGGCAAAGCCACTTCCTCCGCAGGCTACTTTTCGAGGTCCTTATATAAACACTGGTTCCCGAGACGTCGGACCTGACCATCAAACTTA
CACTAAGAAGTGATTTCCTTTCAATGTTGCTTCTTTTCAGTAAGTATTCCTTGGTTTATTTCAATGTAGAAGAAGACTTCATGAATTTTTTTTTTCCCTCATGGAGAAAC
AGTAGTTCACTTGATTTGGAAATCTGTGTAGATAAAAAATATTGATGAAATATCACTATTTACGGATATTTTTGTAAATTATAAAAATTAGGTTCAAATATCATTTTGGT
CCATATACTTTAAAGTTTGTTCACTTTTAGTCTCTATACTTTCAATTGTCCAATTTTGATTCCTGCACTTTCAATAAATCTTAAATTTAG
Protein sequenceShow/hide protein sequence
MTRRRNLTVAIGLIAFASAGLSFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK