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Lsi10G012400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein
Genome locationchr10:16648388..16651943
RNA-Seq ExpressionLsi10G012400
SyntenyLsi10G012400
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646889.1 hypothetical protein Csa_020692 [Cucumis sativus]4.5e-6395.52Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDD  STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV
        FDHEGALTVPCRPSELERILAEEWVEEEEEN C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV

XP_004145816.1 auxin-responsive protein SAUR50 [Cucumis sativus]4.5e-6395.52Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDD  STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV
        FDHEGALTVPCRPSELERILAEEWVEEEEEN C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV

XP_008465358.1 PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo]5.5e-6194.12Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD EVGDDG ST VPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEE--EENSCV
        F+HEGALTVPCRPSELERILAEEWVEEE  EEN C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEE--EENSCV

XP_022140427.1 auxin-responsive protein SAUR50-like [Momordica charantia]2.0e-5585.82Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGS-TPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAKLVT AKKKNGIVKLKTAVGKLQRSLSLGRRS++  DE DYE GDD S T VP D+KEGHFAVVAVDAEEPKRFV PLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGS-TPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV
        FDHEGALTVPCRPSE+ERILAE+W EEEEE+ C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV

XP_038902788.1 auxin-responsive protein SAUR50-like [Benincasa hispida]9.8e-6697.74Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF

Query:  DHEGALTVPCRPSELERILAEEWVEEEEENSCV
        DHEGALTVPCRPSELERILAEEWVEEEEEN C+
Subjt:  DHEGALTVPCRPSELERILAEEWVEEEEENSCV

TrEMBL top hitse value%identityAlignment
A0A0A0KGI2 Uncharacterized protein2.2e-6395.52Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDD  STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDD-GSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV
        FDHEGALTVPCRPSELERILAEEWVEEEEEN C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV

A0A1S3CNL2 auxin-responsive protein SAUR32-like2.7e-6194.12Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD EVGDDG ST VPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEE--EENSCV
        F+HEGALTVPCRPSELERILAEEWVEEE  EEN C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEE--EENSCV

A0A5D3DFC2 Auxin-responsive protein SAUR32-like2.7e-6194.12Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD EVGDDG ST VPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDG-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEE--EENSCV
        F+HEGALTVPCRPSELERILAEEWVEEE  EEN C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEE--EENSCV

A0A6J1CGW5 auxin-responsive protein SAUR50-like9.9e-5685.82Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGS-TPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG
        MAKLVT AKKKNGIVKLKTAVGKLQRSLSLGRRS++  DE DYE GDD S T VP D+KEGHFAVVAVDAEEPKRFV PLSCLTNPTFLRLLEAAAEEYG
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGS-TPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV
        FDHEGALTVPCRPSE+ERILAE+W EEEEE+ C+
Subjt:  FDHEGALTVPCRPSELERILAEEWVEEEEENSCV

A0A6J1K3Y0 auxin-responsive protein SAUR50-like7.1e-5491.13Show/hide
Query:  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVP
        KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D EVGDD STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALTVP
Subjt:  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVP

Query:  CRPSELERILAEEWVEEEE-ENSC
        CRPSELERILAEEW EEEE EN C
Subjt:  CRPSELERILAEEWVEEEE-ENSC

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR504.2e-1137.74Show/hide
Query:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEG
        + I KK + + +       L+R  SLG+++  G DE            +P DV +GHF V     E   R++VP+S LT+P F  LL+ A EE+GFDH+ 
Subjt:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEG

Query:  ALTVPC
         LT+PC
Subjt:  ALTVPC

P0DKL1 Auxin-responsive protein SAUR503.0e-0944.07Show/hide
Query:  VPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCR
        +P DV +GHF V     E   R++VP+SCL +PTF  LL+ + EE+GF+H+  + +PC+
Subjt:  VPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCR

P33079 Auxin-induced protein 10A54.8e-0742.42Show/hide
Query:  DVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHE-GALTVPCRPSELERILA
        DV +G+ AV   D  + +RF +P+S L  P+F  LL  A EE+G+DH  G LT+PC+  E   + A
Subjt:  DVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHE-GALTVPCRPSELERILA

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 109.7e-0842.86Show/hide
Query:  CDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC
        C Y   DD    +P+DV +GHF V         R++VP+S L +  F  LL  A EE+GFDH+  LT+PC
Subjt:  CDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC

Q9ZUZ3 Auxin-responsive protein SAUR322.5e-0840.3Show/hide
Query:  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA
        +DV +G  A+ V    EE +RF+VP+    +P F++LL+ A +EYGFD +G +T+PC   E   + A
Subjt:  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family1.3e-1041.38Show/hide
Query:  LQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC
        L+R  SLG++  S  ++     GD     +P DV +GHF V         R+V+P+S LT P F  LL+ A EE+GFDH   LT+PC
Subjt:  LQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC

AT1G75580.1 SAUR-like auxin-responsive protein family9.6e-1140.38Show/hide
Query:  KKKNGIVKLKTAVGKLQRSLSLGRRSDS--GQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGAL
        KK N + +       L+R  SLG++  +  G+DE       +GS   P +V +GHF V     E   R+VVP+S LT P F  LL+ A EE+GFDH+  L
Subjt:  KKKNGIVKLKTAVGKLQRSLSLGRRSDS--GQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGAL

Query:  TVPC
        T+PC
Subjt:  TVPC

AT2G28085.1 SAUR-like auxin-responsive protein family1.7e-2351.59Show/hide
Query:  KLVTI---AKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDA--EEPKRFVVPLSCLTNPTFLRLLEAAAEE
        +++TI    KK  GIVKLK  V +L +     +   S +  C  E G D    VP+DVKEGHFAV+AVD   E  +RFVVPL  L +P F +LLE A EE
Subjt:  KLVTI---AKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDA--EEPKRFVVPLSCLTNPTFLRLLEAAAEE

Query:  YGFDHEGALTVPCRPSELERILAEEW
        YGF H+GAL VPCRPS L  IL E+W
Subjt:  YGFDHEGALTVPCRPSELERILAEEW

AT3G09870.1 SAUR-like auxin-responsive protein family5.6e-1946.15Show/hide
Query:  KLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEL
        K K  + KLQ      R S    + C++E   + ++ +P DVKEGH AV+AV  E  KRFV+ L  L  P FLRLLE A EE+GF   G LT+PC+P E+
Subjt:  KLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEL

Query:  ERIL
        ++IL
Subjt:  ERIL

AT4G34760.1 SAUR-like auxin-responsive protein family3.0e-1237.74Show/hide
Query:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEG
        + I KK + + +       L+R  SLG+++  G DE            +P DV +GHF V     E   R++VP+S LT+P F  LL+ A EE+GFDH+ 
Subjt:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEG

Query:  ALTVPC
         LT+PC
Subjt:  ALTVPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAATTATTCTACACATTACCATTATTTTCTCTAATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACCGCTGTTGGGAAGCT
TCAAAGAAGCCTCTCTTTAGGTCGAAGGTCCGATTCTGGTCAAGATGAGTGCGATTACGAAGTTGGGGATGACGGATCGACTCCGGTACCGGAAGACGTCAAAGAAGGGC
ATTTTGCAGTCGTGGCGGTTGACGCTGAGGAGCCGAAACGTTTTGTTGTACCGTTGAGTTGCTTGACGAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAG
TATGGATTTGATCATGAAGGGGCGTTGACGGTGCCGTGTCGGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTTGAGGAGGAGGAGGAGAATAGTTGTGTTCA
ATTTGGTGTGATTTTACTCTCAAGTCACGGCCCATCCACAGAAGAAAAAGAAGCTTTAGAAAAGAGAGAAGAGAAAAGAAATAAGCTTTGGTACTTGACATCATATAATA
AGACCACATGGCAAGGCTGCAAAAAACTTGGCTTTAGATGTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAATTATTCTACACATTACCATTATTTTCTCTAATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACCGCTGTTGGGAAGCT
TCAAAGAAGCCTCTCTTTAGGTCGAAGGTCCGATTCTGGTCAAGATGAGTGCGATTACGAAGTTGGGGATGACGGATCGACTCCGGTACCGGAAGACGTCAAAGAAGGGC
ATTTTGCAGTCGTGGCGGTTGACGCTGAGGAGCCGAAACGTTTTGTTGTACCGTTGAGTTGCTTGACGAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAG
TATGGATTTGATCATGAAGGGGCGTTGACGGTGCCGTGTCGGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTTGAGGAGGAGGAGGAGAATAGTTGTGTTCA
ATTTGGTGTGATTTTACTCTCAAGTCACGGCCCATCCACAGAAGAAAAAGAAGCTTTAGAAAAGAGAGAAGAGAAAAGAAATAAGCTTTGGTACTTGACATCATATAATA
AGACCACATGGCAAGGCTGCAAAAAACTTGGCTTTAGATGTGACTAA
Protein sequenceShow/hide protein sequence
MTKLFYTLPLFSLMAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDGSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEE
YGFDHEGALTVPCRPSELERILAEEWVEEEEENSCVQFGVILLSSHGPSTEEKEALEKREEKRNKLWYLTSYNKTTWQGCKKLGFRCD