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Lsi10G012690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlysine-rich arabinogalactan protein 18-like
Genome locationchr10:16981378..16981860
RNA-Seq ExpressionLsi10G012690
SyntenyLsi10G012690
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605547.1 hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4672.02Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS
        MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP ESPL SPPAPPPSDLTP+PSPA VPSPSP P+PS TADS
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS

Query:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        DF NS + GGG ++  SKGGMNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+GNAARSSFL
Subjt:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

XP_008463942.2 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo]1.4e-5180.61Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS
        MA +I  S LLFI +SLFIN +FSLELS QLPPS SP NSPPLPSPT     PASSP ESPLHSPPAPPPSDL PTPSPAPV SP+PTPS S  ADSD  
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS

Query:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        N TS GGGEDS  SKGGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Subjt:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

XP_011656995.1 proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]1.0e-4979.39Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS
        M  +I  S LLFI VSLF N +FSLE  QQLPPSPSP NSPPLPSPT     PASSPVESPLHSPPAPPPSDL  TPSPAP+  P  +PS SP ADSD S
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS

Query:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        N TS GGGEDS  SKGGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Subjt:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

XP_022995398.1 lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]3.7e-4773.21Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS
        MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP ESPL SPPAPPPSDLTP+PSPA VPSPSP P+PS TADS
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS

Query:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        DF NS + GGG ++ ASKGGMNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+GNAARSSFL
Subjt:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

XP_038901486.1 early nodulin-20-like isoform X1 [Benincasa hispida]7.4e-5685.12Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSP---SPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS
        MA SI F SLLFI VSLFIN +FSLELSQQLPPSP   SPENSPPLPSPT     PASSPVESPLHSPPAPPPSDLT +PSP+  PSPSP+PSPSPTADS
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSP---SPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS

Query:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        DFSNSTS+GGGEDS ASKGGM GGKKAGIAVGVIAA  FVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Subjt:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

TrEMBL top hitse value%identityAlignment
A0A0A0KGE9 Uncharacterized protein5.0e-5079.39Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS
        M  +I  S LLFI VSLF N +FSLE  QQLPPSPSP NSPPLPSPT     PASSPVESPLHSPPAPPPSDL  TPSPAP+  P  +PS SP ADSD S
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS

Query:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        N TS GGGEDS  SKGGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Subjt:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

A0A1S3CKF5 pollen-specific leucine-rich repeat extensin-like protein 17.0e-5280.61Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS
        MA +I  S LLFI +SLFIN +FSLELS QLPPS SP NSPPLPSPT     PASSP ESPLHSPPAPPPSDL PTPSPAPV SP+PTPS S  ADSD  
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS

Query:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        N TS GGGEDS  SKGGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Subjt:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

A0A5D3CV84 Pollen-specific leucine-rich repeat extensin-like protein 17.0e-5280.61Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS
        MA +I  S LLFI +SLFIN +FSLELS QLPPS SP NSPPLPSPT     PASSP ESPLHSPPAPPPSDL PTPSPAPV SP+PTPS S  ADSD  
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFS

Query:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        N TS GGGEDS  SKGGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Subjt:  NSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

A0A6J1H149 lysine-rich arabinogalactan protein 18-like1.3e-4571.43Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS
        MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP ESPL SPPAPP SDLTP PSPA VPSPSP P+PS TADS
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS

Query:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        DF NS + GGG ++  SKGGMNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+GNAARSSFL
Subjt:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

A0A6J1K7T9 lysine-rich arabinogalactan protein 18-like1.8e-4773.21Show/hide
Query:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS
        MA S+AF  LL + V++F+++AFSLE   ++PPSPSPE   +SPP+PSPT     PASSP ESPL SPPAPPPSDLTP+PSPA VPSPSP P+PS TADS
Subjt:  MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPE---NSPPLPSPT-----PASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADS

Query:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        DF NS + GGG ++ ASKGGMNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+GNAARSSFL
Subjt:  DFSNSTSTGGGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28440.1 proline-rich family protein3.6e-0840.37Show/hide
Query:  SLELSQQLPPSPSPE-NSPPLPSPTP-ASSPVESPLHSPPAPPPSDLTPT----PSPAPVPSPS---------------PTPSPSPTADSDFSNSTSTGG
        S E    LPPS SPE NSP  P+ +P   S  +SP  SPP PPP   +P+    P PAPVP+PS               P+P+PSP          S   
Subjt:  SLELSQQLPPSPSPE-NSPPLPSPTP-ASSPVESPLHSPPAPPPSDLTPT----PSPAPVPSPS---------------PTPSPSPTADSDFSNSTSTGG

Query:  GEDSVASKG---GMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
        GE+    +G   GM+G +KAGIA+G I  V  + IG  VYKKR+DN+ R++Y       FL
Subjt:  GEDSVASKG---GMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL

AT3G45230.1 hydroxyproline-rich glycoprotein family protein8.8e-1545.61Show/hide
Query:  LLFISVSLFINSAF-SLELSQQLPPSPSPE--NSPPLPSPTPA-----SSPVESPL-HSPPAPPPSDLTPTPSPAPVPSPSP-------------TPSPS
        L FI V++ ++    S E+  +  P+PSP+  +SP + +  P+     +SP ESP+ +S P  P ++ +P+PSPA  PS SP             +PSPS
Subjt:  LLFISVSLFINSAF-SLELSQQLPPSPSPE--NSPPLPSPTPA-----SSPVESPL-HSPPAPPPSDLTPTPSPAPVPSPSP-------------TPSPS

Query:  PTADSDFSNSTSTG--GGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAAR
        P A SD ++S  TG  G +    S GGM+GGKK G+A G IAAVC VG+ GFVYKKRQ+NIRRS+YG AAR
Subjt:  PTADSDFSNSTSTG--GGEDSVASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAAR

AT5G60630.1 FUNCTIONS IN: molecular_function unknown1.7e-0537.66Show/hide
Query:  FISVSLFINSAFSL-----ELSQQLPPSPSPENSPPLPSPTPASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDS
        FI V+L + S  +L     E+S +   SP+ E+S  LP      SP  +  +    P  S LT                   + D ++++ST  GG E S
Subjt:  FISVSLFINSAFSL-----ELSQQLPPSPSPENSPPLPSPTPASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDS

Query:  VASKGGMNGGKKAGIA-VGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSF
        V  + G  GGKK GIA VG IAA   VG GG+V KKR++NIRRS+YG A+   F
Subjt:  VASKGGMNGGKKAGIA-VGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATTCCATTGCTTTCTCTTCTCTTCTCTTCATCTCCGTTTCGCTCTTCATCAACTCCGCTTTCTCTTTGGAACTATCACAGCAACTTCCTCCTTCTCCATCCCC
TGAAAATTCTCCTCCACTACCTTCTCCTACTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCACTCCCACTCCATCTC
CAGCGCCTGTTCCTTCTCCCTCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACTGGCGGTGGAGAAGACTCTGTAGCCTCCAAA
GGCGGGATGAATGGTGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGTCAAGATAACATTCG
TCGATCTCAGTACGGGAACGCTGCTAGGTCTTCGTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATTCCATTGCTTTCTCTTCTCTTCTCTTCATCTCCGTTTCGCTCTTCATCAACTCCGCTTTCTCTTTGGAACTATCACAGCAACTTCCTCCTTCTCCATCCCC
TGAAAATTCTCCTCCACTACCTTCTCCTACTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCACTCCCACTCCATCTC
CAGCGCCTGTTCCTTCTCCCTCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACTGGCGGTGGAGAAGACTCTGTAGCCTCCAAA
GGCGGGATGAATGGTGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGTCAAGATAACATTCG
TCGATCTCAGTACGGGAACGCTGCTAGGTCTTCGTTTTTGTGA
Protein sequenceShow/hide protein sequence
MANSIAFSSLLFISVSLFINSAFSLELSQQLPPSPSPENSPPLPSPTPASSPVESPLHSPPAPPPSDLTPTPSPAPVPSPSPTPSPSPTADSDFSNSTSTGGGEDSVASK
GGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL