; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G012700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:16981868..16985205
RNA-Seq ExpressionLsi10G012700
SyntenyLsi10G012700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A2P2JTU5 Uncharacterized protein MANES_11G1445005.9e-0456.6Show/hide
Query:  VFNVISPSFGRGVEGITRKNESILLILLALLLTGRERERDIGSDEACFDLGIN
        V  +ISPSF RGV+G TRK ESIL  + +LLLTG E ERDI     CF L ++
Subjt:  VFNVISPSFGRGVEGITRKNESILLILLALLLTGRERERDIGSDEACFDLGIN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGAGAACCTATTGTGCCATATAATAAGTGATGCAGAAGACTCAGTCCCTGCTAATAAAGCTACACGGTTAAAATTAATAGGAAAAATAGACAGCTTTAGCTC
TTACCACGGAGTAAAATATGTGGGAGAAGAGAACCACCATTGCAAATTGAACTGTTGCATATACCCATATAAATCTTCGTTTCACTACAAACAAAAACTTTGTTTAGGAT
TACTAAGTAATCAGTTTACAATAGCAACAGACAATCACAGAAGAATCCCAAAGTGCACAAAGCAGACATTGAAGAAGTCATTGATGAGAGTAGACCCAAAACGCAAGAAA
ATGGAAGTGAAATGGCAATTGCACTGGTGCCCATTTTTGCAACCTGCATCTGAACATATTACAGAAGACATGACAAATGATGGATTTAAACTCAAAAGAGTATTCAATGT
CATATCTCCTTCCTTCGGCCGTGGGGTTGAAGGAATTACACGAAAAAACGAATCTATCCTCCTTATACTTCTAGCCTTGTTATTGACTGGAAGAGAAAGAGAGCGAGATA
TCGGTAGTGATGAAGCTTGCTTCGACCTAGGCATAAACATCGTTGCCATGGACAAGCTTGAGGCTTCTCATGTATCCCTGAAGACGAAGAAGCCTCAGAAACAAGGCTGG
ACACCGCCTCAACATCCGAGGAACTTCGATGATTTGCCTCTGGATGAAGATGGCCCTGAAGATCCAGTAGCTATAGCATCTGAAGAGGTAGGTGTTAACACAAAATTCAC
TTTCTTGGGTGTAGGAGTTGATGTTGGAGGCATTTTGATTGCAACAAAATCCGTCGTTCGAGAAGGTATCTCAAGAAAAAGATTCCTTCTCTTCCATTGGTTAGTCCCCG
CTGAGTCCCCGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGAGAACCTATTGTGCCATATAATAAGTGATGCAGAAGACTCAGTCCCTGCTAATAAAGCTACACGGTTAAAATTAATAGGAAAAATAGACAGCTTTAGCTC
TTACCACGGAGTAAAATATGTGGGAGAAGAGAACCACCATTGCAAATTGAACTGTTGCATATACCCATATAAATCTTCGTTTCACTACAAACAAAAACTTTGTTTAGGAT
TACTAAGTAATCAGTTTACAATAGCAACAGACAATCACAGAAGAATCCCAAAGTGCACAAAGCAGACATTGAAGAAGTCATTGATGAGAGTAGACCCAAAACGCAAGAAA
ATGGAAGTGAAATGGCAATTGCACTGGTGCCCATTTTTGCAACCTGCATCTGAACATATTACAGAAGACATGACAAATGATGGATTTAAACTCAAAAGAGTATTCAATGT
CATATCTCCTTCCTTCGGCCGTGGGGTTGAAGGAATTACACGAAAAAACGAATCTATCCTCCTTATACTTCTAGCCTTGTTATTGACTGGAAGAGAAAGAGAGCGAGATA
TCGGTAGTGATGAAGCTTGCTTCGACCTAGGCATAAACATCGTTGCCATGGACAAGCTTGAGGCTTCTCATGTATCCCTGAAGACGAAGAAGCCTCAGAAACAAGGCTGG
ACACCGCCTCAACATCCGAGGAACTTCGATGATTTGCCTCTGGATGAAGATGGCCCTGAAGATCCAGTAGCTATAGCATCTGAAGAGGTAGGTGTTAACACAAAATTCAC
TTTCTTGGGTGTAGGAGTTGATGTTGGAGGCATTTTGATTGCAACAAAATCCGTCGTTCGAGAAGGTATCTCAAGAAAAAGATTCCTTCTCTTCCATTGGTTAGTCCCCG
CTGAGTCCCCGGCCTGA
Protein sequenceShow/hide protein sequence
MAMENLLCHIISDAEDSVPANKATRLKLIGKIDSFSSYHGVKYVGEENHHCKLNCCIYPYKSSFHYKQKLCLGLLSNQFTIATDNHRRIPKCTKQTLKKSLMRVDPKRKK
MEVKWQLHWCPFLQPASEHITEDMTNDGFKLKRVFNVISPSFGRGVEGITRKNESILLILLALLLTGRERERDIGSDEACFDLGINIVAMDKLEASHVSLKTKKPQKQGW
TPPQHPRNFDDLPLDEDGPEDPVAIASEEVGVNTKFTFLGVGVDVGGILIATKSVVREGISRKRFLLFHWLVPAESPA