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Lsi10G012750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPyridoxal 5'-phosphate synthase subunit PdxT
Genome locationchr10:17012207..17014032
RNA-Seq ExpressionLsi10G012750
SyntenyLsi10G012750
Gene Ontology termsGO:0006541 - glutamine metabolic process (biological process)
GO:0008614 - pyridoxine metabolic process (biological process)
GO:0042823 - pyridoxal phosphate biosynthetic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:1903600 - glutaminase complex (cellular component)
GO:0004359 - glutaminase activity (molecular function)
InterPro domainsIPR002161 - Pyridoxal 5'-phosphate synthase subunit PdxT/SNO
IPR021196 - PdxT/SNO family, conserved site
IPR029062 - Class I glutamine amidotransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145736.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis sativus]5.2e-3398.67Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

XP_022140743.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 [Momordica charantia]1.2e-3297.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        +ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

XP_022944556.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita moschata]1.2e-3297.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLA+LHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

XP_023522767.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita pepo subsp. pepo]1.2e-3297.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLA+LHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

XP_038900301.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 [Benincasa hispida]5.2e-3398.67Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

TrEMBL top hitse value%identityAlignment
A0A0A0KAR5 Glutaminase2.5e-3398.67Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

A0A1S3CLW1 Glutaminase5.6e-3397.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFV+MGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

A0A6J1CIP7 Glutaminase5.6e-3397.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        +ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

A0A6J1FUQ8 Glutaminase5.6e-3397.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLA+LHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

A0A6J1JFE0 Glutaminase5.6e-3397.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLA+LHNLFPALREFVRMGKPVWGTCAGLIFLANKATG+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

SwissProt top hitse value%identityAlignment
A6M3G5 Pyridoxal 5'-phosphate synthase subunit PdxT2.5e-1446.58Show/hide
Query:  LRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        +R LG  GVE++K + L ++ ++I+PGGESTT+ KL ++  L  +L+E +  G P WGTCAG+I LAN+  G+
Subjt:  LRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

A7Z0D4 Pyridoxal 5'-phosphate synthase subunit PdxT6.6e-1550.68Show/hide
Query:  ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG
        ++   G KGV I++PEQL ++  LI+PGGESTTM +L + ++    LREF   GKP++GTCAGLI LA +  G
Subjt:  ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG

P37528 Pyridoxal 5'-phosphate synthase subunit PdxT2.5e-1449.32Show/hide
Query:  ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG
        A+   G  G+ +++PEQL  V  LI+PGGESTTM +L + +     LREF   GKP++GTCAGLI LA +  G
Subjt:  ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG

Q3Z8V9 Pyridoxal 5'-phosphate synthase subunit PdxT1.9e-1451.39Show/hide
Query:  LRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG
        LR LG + VE+RK E+L  ++ LIIPGGESTT+ KL     L   +++  R G PVWGTCAG+I LA + +G
Subjt:  LRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATG

Q8LAD0 Probable pyridoxal 5'-phosphate synthase subunit PDX21.1e-3085.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGV+GVEIRK +QLL V+SLIIPGGESTTMAKLAE HNLFPALREFV+MGKPVWGTCAGLIFLA++A G+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR

Arabidopsis top hitse value%identityAlignment
AT5G60540.1 pyridoxine biosynthesis 28.0e-3285.33Show/hide
Query:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR
        AALRRLGV+GVEIRK +QLL V+SLIIPGGESTTMAKLAE HNLFPALREFV+MGKPVWGTCAGLIFLA++A G+
Subjt:  AALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGTCGACGCTTTTCCAATTACCGCCACTCGAAATGAGAGGTTCGAAGTCTTCAATCAACACACGCTTCTGATTCTCTCTCATTCGCCTCCCATTCCCTCCCTTTT
TTCTGCTTCGCCGGTGTCGGAGTTAGCGGCTTTTAGGGCTACTGAACGCACCGATTCACTACCATGGCGATCGTCGGCGTTCTTGCCTTACAGGGATCTTTTAACGAGCA
CATCGCAGGCATATTCTTCTTCTTCTTCTTCTTCTTCGCTATCGCTACCTCCTTCTGTAGTAGGCGTTTCTGTGGATGATTATCTTTTGTTGTTTTTATTTTGGCGCGCA
GCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGCGGGGAAAGCACCACCATGGCCAAACT
TGCGGAGCTCCATAATTTGTTTCCTGCTTTGCGAGAGTTCGTTAGAATGGGGAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATCTTTTTGGCAAACAAGGCTACTGGTC
GATTTCCTTCCTTTTTTTTCCTTAACATCTCAACTTTCGGATGTTTTCTTTTCCAAACCTTACCTCCAACACATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGTCGACGCTTTTCCAATTACCGCCACTCGAAATGAGAGGTTCGAAGTCTTCAATCAACACACGCTTCTGATTCTCTCTCATTCGCCTCCCATTCCCTCCCTTTT
TTCTGCTTCGCCGGTGTCGGAGTTAGCGGCTTTTAGGGCTACTGAACGCACCGATTCACTACCATGGCGATCGTCGGCGTTCTTGCCTTACAGGGATCTTTTAACGAGCA
CATCGCAGGCATATTCTTCTTCTTCTTCTTCTTCTTCGCTATCGCTACCTCCTTCTGTAGTAGGCGTTTCTGTGGATGATTATCTTTTGTTGTTTTTATTTTGGCGCGCA
GCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGCGGGGAAAGCACCACCATGGCCAAACT
TGCGGAGCTCCATAATTTGTTTCCTGCTTTGCGAGAGTTCGTTAGAATGGGGAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATCTTTTTGGCAAACAAGGCTACTGGTC
GATTTCCTTCCTTTTTTTTCCTTAACATCTCAACTTTCGGATGTTTTCTTTTCCAAACCTTACCTCCAACACATCAATAA
Protein sequenceShow/hide protein sequence
MPVDAFPITATRNERFEVFNQHTLLILSHSPPIPSLFSASPVSELAAFRATERTDSLPWRSSAFLPYRDLLTSTSQAYSSSSSSSSLSLPPSVVGVSVDDYLLLFLFWRA
ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGRFPSFFFLNISTFGCFLFQTLPPTHQ