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Lsi10G012870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G012870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:17111535..17112268
RNA-Seq ExpressionLsi10G012870
SyntenyLsi10G012870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035320.1 hypothetical protein E6C27_scaffold228G001200 [Cucumis melo var. makuwa]2.7e-2277.78Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        MQSKIGSQGLPLC+S FTLSNHSLST++ADHDRRREAM+ R QRS NM +YR LEAIREGDLE+FVNE     +ICAAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA

KAG6605527.1 hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0850Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRN-----MEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        M SK+ S GLPLC+SGF+LS+  L+TEM DHDRRREAMR+R   S +        Y +++AI +GDL +      +T L  AAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRN-----MEEYRLLEAIREGDLENFVNELYETNLICAAKAA

KGN47309.1 hypothetical protein Csa_022984 [Cucumis sativus]7.9e-2276.54Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        MQSKIGSQGLPLC+S FTLSNHSLST++ADHDRRREAM+ R +RS NM ++RLLEAIREGDLE+FVNE     +ICAAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA

XP_023006923.1 uncharacterized protein LOC111499567 [Cucurbita maxima]4.5e-0952.33Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRN-----MEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        M SK+ S GLPLC+SGF+LS+ SLSTEM DHDRRREAMR+R   S +        Y +++AI +GDL +      +T L  AAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRN-----MEEYRLLEAIREGDLENFVNELYETNLICAAKAA

XP_031265545.1 uncharacterized protein LOC116123970 [Pistacia vera]1.2e-0646.81Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNH-SLSTEMADHDRRREAMRKRMQRSRNMEEYRLLE--------AIREG----DLENFVNELYETNLICAAKAA
        M +  GS GLPLCVSG T S+H +LS EMADHDRRREAM+K+  R R+  +   +E         I EG    DL   + +LY     C AKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNH-SLSTEMADHDRRREAMRKRMQRSRNMEEYRLLE--------AIREG----DLENFVNELYETNLICAAKAA

TrEMBL top hitse value%identityAlignment
A0A0A0KEP9 Uncharacterized protein3.8e-2276.54Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        MQSKIGSQGLPLC+S FTLSNHSLST++ADHDRRREAM+ R +RS NM ++RLLEAIREGDLE+FVNE     +ICAAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA

A0A314UD00 Uncharacterized protein2.5e-0544.44Show/hide
Query:  MQSKI---GSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSR-----NME------EYRLLEAIREG----DLENFVNELYETNLICAAKAA
        MQS +   G+ GLPLCVSG T  + + S EMADHDRRREAM+++  ++R     N E        R+ E IREG    DL + +++L    L C AKAA
Subjt:  MQSKI---GSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSR-----NME------EYRLLEAIREG----DLENFVNELYETNLICAAKAA

A0A5D3CSY7 Uncharacterized protein1.3e-2277.78Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        MQSKIGSQGLPLC+S FTLSNHSLST++ADHDRRREAM+ R QRS NM +YR LEAIREGDLE+FVNE     +ICAAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA

A0A6J1L6A3 uncharacterized protein LOC1114995672.2e-0952.33Show/hide
Query:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRN-----MEEYRLLEAIREGDLENFVNELYETNLICAAKAA
        M SK+ S GLPLC+SGF+LS+ SLSTEM DHDRRREAMR+R   S +        Y +++AI +GDL +      +T L  AAKAA
Subjt:  MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRN-----MEEYRLLEAIREGDLENFVNELYETNLICAAKAA

D7SKV1 Uncharacterized protein8.6e-0647.13Show/hide
Query:  GSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSR-----NME-----EY-RLLEAIREGDLENFVNELYETNLICAAKAA
        GS GLPLCVSG T   H++S EMADHDRRREAM++++ ++R     N E      Y R +E I+EG+++   ++ Y   L C AKAA
Subjt:  GSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSR-----NME-----EY-RLLEAIREGDLENFVNELYETNLICAAKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G60400.3 unknown protein1.2e-0451.06Show/hide
Query:  GSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYR
        G+ G PLC+SG T    SLS EMADHD+RR+ +++R +RS    EY+
Subjt:  GSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCCAAGATTGGATCTCAAGGTCTTCCTCTCTGTGTTTCAGGCTTCACTCTCTCTAATCATTCCCTCTCTACTGAGATGGCAGATCATGATCGAAGGAGGGAAGC
CATGAGAAAGAGAATGCAAAGATCAAGAAACATGGAGGAATACAGGTTGTTGGAAGCGATTAGAGAGGGAGATCTTGAGAATTTCGTCAATGAATTGTATGAAACCAACT
TAATTTGTGCTGCAAAAGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATCTGGCACCAAAGGCCCCTCAAAAAGCCCCAAAAACCAAACCTATGCTTTAGATTCTTTATTCTCTCTCTTTTGTTCTTCTTTCTGTTTTTCTCCATCAAACAACTGAA
ACTGTAATTCCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTGTCAGAGAAATGCAGTCCAAGATTGGATCTCAAGGTCTTCCTCTCTGTGTTTCAGGCTTCA
CTCTCTCTAATCATTCCCTCTCTACTGAGATGGCAGATCATGATCGAAGGAGGGAAGCCATGAGAAAGAGAATGCAAAGATCAAGAAACATGGAGGAATACAGGTTGTTG
GAAGCGATTAGAGAGGGAGATCTTGAGAATTTCGTCAATGAATTGTATGAAACCAACTTAATTTGTGCTGCAAAAGCTGCTTAGATTAGAAAAAAACAGAGTCTATGATC
TGGGTTTGGTTGGAATTGGATCTGTCTCTTTTCGTATATTTTGTCAATTTCTGATCTGGGTTTGTTTTATGTATTATTCTTGTTTGATCTGAAATGGGATTTGTTTATGT
ACTTTGTGAAGAGAGAAAATGGAATATTGTGGATTATTTGGCTCTAAATGGTTAAAAATTTGACTTGTTATGGATGGAAGCTAGAATAAATTCAA
Protein sequenceShow/hide protein sequence
MQSKIGSQGLPLCVSGFTLSNHSLSTEMADHDRRREAMRKRMQRSRNMEEYRLLEAIREGDLENFVNELYETNLICAAKAA