; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G013200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G013200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:17407450..17408417
RNA-Seq ExpressionLsi10G013200
SyntenyLsi10G013200
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010594.1 hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-4664.57Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI    S  QEPQGR SP  R    MDDS+ S+LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKVD
                    +NL IKDGGI+AVY + ++PEAPKY D VELA+LG AGMQIASS LNLTSVG RDLR P K++
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKVD

XP_022986953.1 uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima]1.3e-4566.08Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI+   S  QEPQGR SP  R    MDDS+ S LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIP
                    +NL IKDGGI+AVY + ++PEAPKY D VELA+LGDAGMQIASS LNLTSVG RDLR P
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIP

XP_022986954.1 uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima]5.8e-4665.9Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI+   S  QEPQGR SP  R    MDDS+ S LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNK
                    +NL IKDGGI+AVY + ++PEAPKY D VELA+LGDAGMQIASS LNLTSVG RDLR P K
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNK

XP_023512016.1 uncharacterized protein LOC111776853 isoform X2 [Cucurbita pepo subsp. pepo]2.9e-4564.74Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI+   S  QEPQGR SP    T  MDDS+ S+LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNK
                    +NL I DGGI+AVY + ++PEAPKY D VELA+LGDAGM IASS LNLTSVG RDLR P K
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNK

XP_038902298.1 uncharacterized protein LOC120088933 [Benincasa hispida]3.4e-6272.99Show/hide
Query:  MQQRSLSSFRATND-DHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKF
        MQQR+LSSFRATND DH +IMIFS+ TQEP+GRRSP  R + +MDDSNA LLPISDPRFST+KRDHN RYRF ERWIHLIPLIL+L+LFILWW SYP   
Subjt:  MQQRSLSSFRATND-DHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKF

Query:  LQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKVD
                   +N+ IKDG I AVY NDQ+PEAPKY D VELAVLGDAGMQIASS LN+TS+GDRDLRIP+KVD
Subjt:  LQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKVD

TrEMBL top hitse value%identityAlignment
A0A1S3CKP4 uncharacterized protein LOC103501898 isoform X22.7e-4160.23Show/hide
Query:  MQQRSLSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNAS--LLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQR   +FR T D+H S+MI S++++EPQG RS      S+ DD  A+  LLPISDPRFS RKRD N RYRF   WIHLIPLIL+L+LFILWW SYP  
Subjt:  MQQRSLSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNAS--LLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLR-IPNKVD
                        IKDGGIRA YE ++ PE PKY D  ELAVLGDAGM IASS LNLTSVGDRD R IP+K+D
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLR-IPNKVD

A0A5D3CTN8 Uncharacterized protein2.7e-4160.23Show/hide
Query:  MQQRSLSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNAS--LLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQR   +FR T D+H S+MI S++++EPQG RS      S+ DD  A+  LLPISDPRFS RKRD N RYRF   WIHLIPLIL+L+LFILWW SYP  
Subjt:  MQQRSLSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNAS--LLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLR-IPNKVD
                        IKDGGIRA YE ++ PE PKY D  ELAVLGDAGM IASS LNLTSVGDRD R IP+K+D
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLR-IPNKVD

A0A6J1FUE4 uncharacterized protein LOC1114488841.5e-4463.79Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI+   S  QEPQGR SP  R    MDDS+ S+LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKV
                    +NL IKDGGI+AVY + ++PEAPKY D VELA+L  AGMQIASS LNLTSVG RDL  P K+
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKV

A0A6J1JHI4 uncharacterized protein LOC111484535 isoform X22.8e-4665.9Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI+   S  QEPQGR SP  R    MDDS+ S LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNK
                    +NL IKDGGI+AVY + ++PEAPKY D VELA+LGDAGMQIASS LNLTSVG RDLR P K
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNK

A0A6J1JI18 uncharacterized protein LOC111484535 isoform X16.2e-4666.08Show/hide
Query:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK
        MQQRS   SSFRAT DDH SI+   S  QEPQGR SP  R    MDDS+ S LP+SDP  S RKRDHN RY+F ERWIHLIPLIL+LVLFILWW SYP  
Subjt:  MQQRS--LSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGK

Query:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIP
                    +NL IKDGGI+AVY + ++PEAPKY D VELA+LGDAGMQIASS LNLTSVG RDLR P
Subjt:  FLQEYYVSQTHSLNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein7.6e-0437.5Show/hide
Query:  SSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYP
        +SI+    S   P    SP    TS   D +  LLP  DP     K++ + R+R  E  IH IP++LIL   ILW  S P
Subjt:  SSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYP

AT2G35658.2 unknown protein4.0e-0537.65Show/hide
Query:  SSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKFLQ
        +SI+    S   P    SP    TS   D +  LLP  DP     K++ + R+R  E  IH IP++LIL   ILW  S PG  +Q
Subjt:  SSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKFLQ

AT2G35658.3 unknown protein6.9e-0537.65Show/hide
Query:  SSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKFLQ
        +SI+    S   P    SP    TS   D +  LLP  DP     K++ + R+R  E  IH IP++LIL   ILW  S P K  Q
Subjt:  SSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKFLQ

AT4G16840.1 unknown protein8.1e-0645.31Show/hide
Query:  RRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSY
        R  P  +  + M+D    LLP  DP     KR+ + R+RF E  IHLIPLIL+L + ILW  SY
Subjt:  RRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGAGATCGTTGAGTTCGTTCCGAGCAACAAATGATGATCATTCCAGCATAATGATCTTCAGCAGTTCAACACAAGAGCCACAAGGAAGACGCTCTCCTGCAGG
AAGATTAACATCAATAATGGACGATTCCAATGCCAGTCTTCTTCCAATTTCCGATCCTCGTTTCAGCACAAGGAAGCGAGATCACAATTTGCGCTACAGATTCGTCGAGA
GGTGGATTCATTTGATTCCTTTGATTCTAATCCTCGTCCTCTTCATTCTCTGGTGGTGCTCTTATCCAGGTAAATTTCTTCAAGAATATTATGTTTCTCAGACGCATTCA
TTGAATTTGGCGATCAAGGATGGAGGAATTAGGGCAGTTTATGAAAACGATCAGTATCCGGAGGCGCCGAAGTACTTTGATCGTGTCGAACTTGCCGTCTTAGGAGATGC
TGGAATGCAGATTGCTTCGAGTTCTTTGAATCTAACCAGCGTTGGCGATCGAGATTTACGGATACCGAATAAGGTCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGAGATCGTTGAGTTCGTTCCGAGCAACAAATGATGATCATTCCAGCATAATGATCTTCAGCAGTTCAACACAAGAGCCACAAGGAAGACGCTCTCCTGCAGG
AAGATTAACATCAATAATGGACGATTCCAATGCCAGTCTTCTTCCAATTTCCGATCCTCGTTTCAGCACAAGGAAGCGAGATCACAATTTGCGCTACAGATTCGTCGAGA
GGTGGATTCATTTGATTCCTTTGATTCTAATCCTCGTCCTCTTCATTCTCTGGTGGTGCTCTTATCCAGGTAAATTTCTTCAAGAATATTATGTTTCTCAGACGCATTCA
TTGAATTTGGCGATCAAGGATGGAGGAATTAGGGCAGTTTATGAAAACGATCAGTATCCGGAGGCGCCGAAGTACTTTGATCGTGTCGAACTTGCCGTCTTAGGAGATGC
TGGAATGCAGATTGCTTCGAGTTCTTTGAATCTAACCAGCGTTGGCGATCGAGATTTACGGATACCGAATAAGGTCGATTGA
Protein sequenceShow/hide protein sequence
MQQRSLSSFRATNDDHSSIMIFSSSTQEPQGRRSPAGRLTSIMDDSNASLLPISDPRFSTRKRDHNLRYRFVERWIHLIPLILILVLFILWWCSYPGKFLQEYYVSQTHS
LNLAIKDGGIRAVYENDQYPEAPKYFDRVELAVLGDAGMQIASSSLNLTSVGDRDLRIPNKVD