; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G013330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G013330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAn Arabidopsis thialiana chromosome BAC genomic sequence
Genome locationchr10:17539000..17539461
RNA-Seq ExpressionLsi10G013330
SyntenyLsi10G013330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035268.1 uncharacterized protein E6C27_scaffold228G00590 [Cucumis melo var. makuwa]2.8e-6890.2Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDA LPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQKISRRKKKK AA
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
         A++   GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +REVH
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

KAE8647064.1 hypothetical protein Csa_023018 [Cucumis sativus]5.8e-6690.73Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQ+ISRRKKKKTA 
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLRE
         A + S GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +RE
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLRE

XP_004148240.1 uncharacterized protein LOC101218723 [Cucumis sativus]2.3e-6790.85Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQ+ISRRKKKKTA 
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
         A + S GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +REVH
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

XP_008463974.1 PREDICTED: uncharacterized protein LOC103501967 [Cucumis melo]8.9e-6790.07Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDA LPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQKISRRKKKK AA
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLRE
         A++   GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +RE
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLRE

XP_038902301.1 uncharacterized protein LOC120088935 [Benincasa hispida]4.0e-6790.2Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EHVPETK NKCF+KVGMRQKI RRKKK TAA
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
          +   G  EKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADN+REVH
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

TrEMBL top hitse value%identityAlignment
A0A0A0KET2 Uncharacterized protein1.1e-6790.85Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQ+ISRRKKKKTA 
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
         A + S GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +REVH
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

A0A1S3CKF0 uncharacterized protein LOC1035019674.3e-6790.07Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDA LPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQKISRRKKKK AA
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLRE
         A++   GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +RE
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLRE

A0A5A7SXD3 Uncharacterized protein1.3e-6890.2Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA
        MASVCISNCINDA LPVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+EH PETK NKCFAKVGMRQKISRRKKKK AA
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAA

Query:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
         A++   GDEKIRKSSRLKKAKE+SCAALTSVFRRLLSCTAKVDVAD +REVH
Subjt:  DADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

A0A6J1G522 uncharacterized protein LOC1114509872.5e-5982.28Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRR-----KK
        MASVCISNCINDAR+PVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE++++PE K NKCF KVGMRQK+SRR     KK
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRR-----KK

Query:  KKTAADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
        KK  A+ D+     EKIRK S LKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  KKTAADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

A0A6J1L3K0 uncharacterized protein LOC1114995791.6e-5881.76Show/hide
Query:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRR------K
        MASVCISNCINDAR+PVRPTYINLYKWPESDAEFIRSVSSKL NRTSRVVDSISCRQMYLRSYTFSRE+++V E K NKCF KVGMRQK+S R      K
Subjt:  MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRR------K

Query:  KKKTAADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH
        KKK  A+ DD     EKIRK S LKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  KKKTAADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein2.4e-1739.47Show/hide
Query:  MASVCISNCINDAR--LPVRP--TYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKK
        MAS CI +C+N  R  + VRP  TY NLYKWP ++AEF+RS++   +   + VVDSISCRQMYLRSYTFS E+        N+     G  + ++RR  +
Subjt:  MASVCISNCINDAR--LPVRP--TYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKK

Query:  KTAADADDGSGGDEKIRKSSRLKKAKELSCAALT-SVFRRLLSCTAKVDVAD
                G GG +K  K++ ++  K  SC      + R+ LSC +   V +
Subjt:  KTAADADDGSGGDEKIRKSSRLKKAKELSCAALT-SVFRRLLSCTAKVDVAD

AT3G46310.1 unknown protein4.2e-1448Show/hide
Query:  MASVCISNCIN--DARLPVRP--TYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEH
        MAS CI +C+N  +  + VRP  T+  ++KWP ++ EF++S+S   + R +  V+S+SCRQMYLRSYTFSR++E+
Subjt:  MASVCISNCIN--DARLPVRP--TYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEH

AT5G02640.1 unknown protein2.3e-2849.07Show/hide
Query:  MASVCISNCINDA---RLPVRP---TYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKAN-----KCFAKVGMRQK
        M SVCIS+CINDA   R+PVRP   +Y+NLYKWPESDAEF+RSV        +RVVDSISCRQMYLRSYTFSRED+     K +      C  +V     
Subjt:  MASVCISNCINDA---RLPVRP---TYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKAN-----KCFAKVGMRQK

Query:  ISRRKKKKTA---ADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVAD
          R+ K++      ++       EK R+ SR K  +E +C+ +  +FRRLLSC A VDV D
Subjt:  ISRRKKKKTA---ADADDGSGGDEKIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGTATTTCCAACTGCATCAACGACGCTCGACTTCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCCGAATCCGACGCCGAGTTTATCCGATC
CGTCAGCTCTAAGCTCAATAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGACGAGCACGTACCGG
AGACGAAGGCCAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCTGCGGACGCCGATGACGGCAGCGGCGGCGATGAG
AAGATTAGGAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGA
TAATTTGCGAGAGGTCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGTCTGTATTTCCAACTGCATCAACGACGCTCGACTTCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCCGAATCCGACGCCGAGTTTATCCGATC
CGTCAGCTCTAAGCTCAATAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGACGAGCACGTACCGG
AGACGAAGGCCAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCTGCGGACGCCGATGACGGCAGCGGCGGCGATGAG
AAGATTAGGAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGA
TAATTTGCGAGAGGTCCATTAG
Protein sequenceShow/hide protein sequence
MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKANKCFAKVGMRQKISRRKKKKTAADADDGSGGDE
KIRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH