; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G013480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G013480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc finger protein ZAT11
Genome locationchr10:17721906..17722334
RNA-Seq ExpressionLsi10G013480
SyntenyLsi10G013480
Gene Ontology termsGO:0010200 - response to chitin (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647068.1 hypothetical protein Csa_023006 [Cucumis sativus]8.0e-5479.72Show/hide
Query:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHN-NQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQ
        MADS I        PRVFVCKTCNREFSSFQALGGHRASHRKPKLS SGD   N NQ KTK HEC+ICGVEFPVGQALGGHMRRHRNSSPP       AQ
Subjt:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHN-NQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQ

Query:  PVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        PVSD+SD D GVGGGV LDLNLTPLENDLVRLQLMAPPVGC T
Subjt:  PVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

XP_004148235.1 zinc finger protein ZAT18 [Cucumis sativus]8.0e-5479.72Show/hide
Query:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHN-NQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQ
        MADS I        PRVFVCKTCNREFSSFQALGGHRASHRKPKLS SGD   N NQ KTK HEC+ICGVEFPVGQALGGHMRRHRNSSPP       AQ
Subjt:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHN-NQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQ

Query:  PVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        PVSD+SD D GVGGGV LDLNLTPLENDLVRLQLMAPPVGC T
Subjt:  PVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

XP_008448374.1 PREDICTED: zinc finger protein ZAT11 [Cucumis melo]5.0e-5681.94Show/hide
Query:  SSAAPEFR--PRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGD-VFH-NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPP---VDDRPPMAQ
        SS  P F   PRVFVCKTCNREFSSFQALGGHRASHRKPKLS S D VF+ +NQ+KTKVHEC+ICGVEFPVGQALGGHMRRHRNSSPP   V+D P M Q
Subjt:  SSAAPEFR--PRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGD-VFH-NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPP---VDDRPPMAQ

Query:  P-VSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        P VSD+SDCD GVGGGV LDLNLTPLENDLVRLQLMAPPVGC T
Subjt:  P-VSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

XP_023007017.1 zinc finger protein ZAT11-like [Cucurbita maxima]1.2e-5278.77Show/hide
Query:  MADSLIS---SAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSP-PVDDRPP
        MAD LIS   S    FR RVFVCKTCNREFSSFQALGGHRASHRKPK  S  D  HNN IK+K HEC+ICG+EFPVGQALGGHMRRHRNSSP PV   P 
Subjt:  MADSLIS---SAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSP-PVDDRPP

Query:  MAQPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
         AQPVSDDSDCD G  G VG+DLNLTPLENDLVRLQLMAPPVGCLT
Subjt:  MAQPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

XP_038902055.1 zinc finger protein ZAT11-like [Benincasa hispida]1.3e-6790.97Show/hide
Query:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLS-SSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSS-PPVDDRPPMA
        MADS ISS+ PEFRPRVF CKTCNREFSSFQALGGHRASHRKPKLS SSGDVFHNNQIKTKVHEC+ICGVEFPVGQALGGHMRRHRNSS PPVDDRP +A
Subjt:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLS-SSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSS-PPVDDRPPMA

Query:  QPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        QPVSDDSD D   GGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
Subjt:  QPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

TrEMBL top hitse value%identityAlignment
A0A0A0KEU7 Uncharacterized protein3.9e-5479.72Show/hide
Query:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHN-NQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQ
        MADS I        PRVFVCKTCNREFSSFQALGGHRASHRKPKLS SGD   N NQ KTK HEC+ICGVEFPVGQALGGHMRRHRNSSPP       AQ
Subjt:  MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHN-NQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQ

Query:  PVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        PVSD+SD D GVGGGV LDLNLTPLENDLVRLQLMAPPVGC T
Subjt:  PVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

A0A1S3BJI5 zinc finger protein ZAT112.4e-5681.94Show/hide
Query:  SSAAPEFR--PRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGD-VFH-NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPP---VDDRPPMAQ
        SS  P F   PRVFVCKTCNREFSSFQALGGHRASHRKPKLS S D VF+ +NQ+KTKVHEC+ICGVEFPVGQALGGHMRRHRNSSPP   V+D P M Q
Subjt:  SSAAPEFR--PRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGD-VFH-NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPP---VDDRPPMAQ

Query:  P-VSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        P VSD+SDCD GVGGGV LDLNLTPLENDLVRLQLMAPPVGC T
Subjt:  P-VSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

A0A5A7V8C9 Zinc finger protein ZAT112.4e-5681.94Show/hide
Query:  SSAAPEFR--PRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGD-VFH-NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPP---VDDRPPMAQ
        SS  P F   PRVFVCKTCNREFSSFQALGGHRASHRKPKLS S D VF+ +NQ+KTKVHEC+ICGVEFPVGQALGGHMRRHRNSSPP   V+D P M Q
Subjt:  SSAAPEFR--PRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGD-VFH-NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPP---VDDRPPMAQ

Query:  P-VSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        P VSD+SDCD GVGGGV LDLNLTPLENDLVRLQLMAPPVGC T
Subjt:  P-VSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

A0A6J1JCR1 zinc finger protein ZAT12-like2.8e-5275.69Show/hide
Query:  MADSLISSAA--PEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMA
        + D LIS+ A    F  RVFVCKTCNREFSSFQALGGHRASHRK K   SGD  HN  IKTK HEC++CG+EFP+GQALGGHMRRHRNSSPP  D PP  
Subjt:  MADSLISSAA--PEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMA

Query:  QPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
        QPVSD+SD D GVGG  G+DLNLTPLENDLVRLQLMAPPVGCLT
Subjt:  QPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

A0A6J1KXD4 zinc finger protein ZAT11-like5.6e-5378.77Show/hide
Query:  MADSLIS---SAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSP-PVDDRPP
        MAD LIS   S    FR RVFVCKTCNREFSSFQALGGHRASHRKPK  S  D  HNN IK+K HEC+ICG+EFPVGQALGGHMRRHRNSSP PV   P 
Subjt:  MADSLIS---SAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSP-PVDDRPP

Query:  MAQPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT
         AQPVSDDSDCD G  G VG+DLNLTPLENDLVRLQLMAPPVGCLT
Subjt:  MAQPVSDDSDCDGGVGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT121.9e-2166.67Show/hide
Query:  RVFVCKTCNREFSSFQALGGHRASHRKPK--LSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSS
        RVF CKTC ++F SFQALGGHRASH+KP     SSG +    ++KT  H C ICGVEFP+GQALGGHMRRHRN S
Subjt:  RVFVCKTCNREFSSFQALGGHRASHRKPK--LSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSS

Q42453 Zinc finger protein ZAT72.3e-1964.94Show/hide
Query:  RVFVCKTCNREFSSFQALGGHRASHRK------PKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRN
        RVF CKTC +EFSSFQALGGHRASH+K      P L  S     N + KT  H C ICGV+FP+GQALGGHMRRHRN
Subjt:  RVFVCKTCNREFSSFQALGGHRASHRK------PKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRN

Q9LFG0 Zinc finger protein ZAT184.9e-2249.57Show/hide
Query:  FVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPP---MAQPVSDDSDCDGGVGGG
        F CKTCNR+F SFQALGGHRASH+KPKL    +   +   +  +H+C IC   F  GQALGGHMR+HR S        P    ++PV +       +   
Subjt:  FVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPP---MAQPVSDDSDCDGGVGGG

Query:  VGLDLNLTPLENDLV
          LDLNLTPLENDLV
Subjt:  VGLDLNLTPLENDLV

Q9LX85 Zinc finger protein ZAT82.3e-1965.33Show/hide
Query:  RVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDV---FHNNQIKTKV-HECAICGVEFPVGQALGGHMRRHRN
        RVF CKTC +EFSSFQALGGHRASH+K   SS   +     N + KT   H C ICGVEFP+GQALGGHMRRHR+
Subjt:  RVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDV---FHNNQIKTKV-HECAICGVEFPVGQALGGHMRRHRN

Q9SLD4 Zinc finger protein ZAT111.3e-2251.64Show/hide
Query:  FVCKTCNREFSSFQALGGHRASHRKPKLS-SSGDVFH--NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNS--------SPPVDDRPPMAQPVSDDSD
        F CKTCN+ FSSFQALGGHRASH+KPKL+    DV H  N+      H+C+IC   F  GQALGGHMRRHR+S        SP +   P + +       
Subjt:  FVCKTCNREFSSFQALGGHRASHRKPKLS-SSGDVFH--NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNS--------SPPVDDRPPMAQPVSDDSD

Query:  CDGGVGGGVGLDLNLTPLENDL
        C G     + LDLNLTPLENDL
Subjt:  CDGGVGGGVGLDLNLTPLENDL

Arabidopsis top hitse value%identityAlignment
AT2G28710.1 C2H2-type zinc finger family protein3.4e-2650.82Show/hide
Query:  RPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDR--PPMAQPVSDDSDCDGGV
        + RVF CKTCN+EF SFQALGGHRASHR+             ++K   HEC ICG EF VGQALGGHMR+HR  S     R   P   PV+      G  
Subjt:  RPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDR--PPMAQPVSDDSDCDGGV

Query:  GGGVGLDLNLTPLENDLVRLQL
           + LDLNLTPLEN+ ++L+L
Subjt:  GGGVGLDLNLTPLENDLVRLQL

AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein9.2e-2451.64Show/hide
Query:  FVCKTCNREFSSFQALGGHRASHRKPKLS-SSGDVFH--NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNS--------SPPVDDRPPMAQPVSDDSD
        F CKTCN+ FSSFQALGGHRASH+KPKL+    DV H  N+      H+C+IC   F  GQALGGHMRRHR+S        SP +   P + +       
Subjt:  FVCKTCNREFSSFQALGGHRASHRKPKLS-SSGDVFH--NNQIKTKVHECAICGVEFPVGQALGGHMRRHRNS--------SPPVDDRPPMAQPVSDDSD

Query:  CDGGVGGGVGLDLNLTPLENDL
        C G     + LDLNLTPLENDL
Subjt:  CDGGVGGGVGLDLNLTPLENDL

AT3G46080.1 C2H2-type zinc finger family protein1.6e-2065.33Show/hide
Query:  RVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDV---FHNNQIKTKV-HECAICGVEFPVGQALGGHMRRHRN
        RVF CKTC +EFSSFQALGGHRASH+K   SS   +     N + KT   H C ICGVEFP+GQALGGHMRRHR+
Subjt:  RVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDV---FHNNQIKTKV-HECAICGVEFPVGQALGGHMRRHRN

AT3G53600.1 C2H2-type zinc finger family protein3.5e-2349.57Show/hide
Query:  FVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPP---MAQPVSDDSDCDGGVGGG
        F CKTCNR+F SFQALGGHRASH+KPKL    +   +   +  +H+C IC   F  GQALGGHMR+HR S        P    ++PV +       +   
Subjt:  FVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPP---MAQPVSDDSDCDGGVGGG

Query:  VGLDLNLTPLENDLV
          LDLNLTPLENDLV
Subjt:  VGLDLNLTPLENDLV

AT5G59820.1 C2H2-type zinc finger family protein1.3e-2266.67Show/hide
Query:  RVFVCKTCNREFSSFQALGGHRASHRKPK--LSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSS
        RVF CKTC ++F SFQALGGHRASH+KP     SSG +    ++KT  H C ICGVEFP+GQALGGHMRRHRN S
Subjt:  RVFVCKTCNREFSSFQALGGHRASHRKPK--LSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTCCTTGATTTCTTCTGCCGCGCCGGAGTTTCGCCCTCGAGTTTTTGTCTGCAAAACTTGTAATCGTGAATTTTCTTCGTTTCAAGCTCTCGGTGGTCACAG
AGCTTCGCATCGGAAGCCGAAATTGTCGTCGTCCGGTGATGTTTTTCATAATAATCAGATTAAGACGAAGGTTCATGAGTGTGCTATTTGTGGAGTTGAGTTTCCCGTTG
GGCAGGCGCTTGGTGGTCACATGCGGCGGCATCGGAATTCTTCTCCGCCTGTTGATGATCGTCCGCCGATGGCTCAGCCGGTCTCCGATGACTCTGATTGCGATGGCGGT
GTTGGAGGTGGTGTTGGATTGGATTTGAATCTCACGCCGTTGGAGAATGATCTCGTCCGCTTGCAGTTGATGGCTCCCCCGGTCGGTTGCTTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTCCTTGATTTCTTCTGCCGCGCCGGAGTTTCGCCCTCGAGTTTTTGTCTGCAAAACTTGTAATCGTGAATTTTCTTCGTTTCAAGCTCTCGGTGGTCACAG
AGCTTCGCATCGGAAGCCGAAATTGTCGTCGTCCGGTGATGTTTTTCATAATAATCAGATTAAGACGAAGGTTCATGAGTGTGCTATTTGTGGAGTTGAGTTTCCCGTTG
GGCAGGCGCTTGGTGGTCACATGCGGCGGCATCGGAATTCTTCTCCGCCTGTTGATGATCGTCCGCCGATGGCTCAGCCGGTCTCCGATGACTCTGATTGCGATGGCGGT
GTTGGAGGTGGTGTTGGATTGGATTTGAATCTCACGCCGTTGGAGAATGATCTCGTCCGCTTGCAGTTGATGGCTCCCCCGGTCGGTTGCTTGACATAA
Protein sequenceShow/hide protein sequence
MADSLISSAAPEFRPRVFVCKTCNREFSSFQALGGHRASHRKPKLSSSGDVFHNNQIKTKVHECAICGVEFPVGQALGGHMRRHRNSSPPVDDRPPMAQPVSDDSDCDGG
VGGGVGLDLNLTPLENDLVRLQLMAPPVGCLT