; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G013490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G013490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:17724170..17724858
RNA-Seq ExpressionLsi10G013490
SyntenyLsi10G013490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605482.1 hypothetical protein SDJN03_02799, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1843.17Show/hide
Query:  FEDQEQLWRQLLLKEADHRRMISLRFLQQHLL---------------------NPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWS
        FE++++LW+ L  + A  +RM +L  L++  L                      P PPP P PP   EF        +D++ LTSFLEVD SFFSPWNW+
Subjt:  FEDQEQLWRQLLLKEADHRRMISLRFLQQHLL---------------------NPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWS

Query:  PNSP--VQNARTNHRMIFQ-PDSFFAIDQELYNKKSCKE
        PNSP   +NAR N RM+FQ PDSFF+ DQ+LY + S K+
Subjt:  PNSP--VQNARTNHRMIFQ-PDSFFAIDQELYNKKSCKE
XP_022148435.1 uncharacterized protein LOC111017083 [Momordica charantia]1.5e-0541.03Show/hide
Query:  QLLLKEADHRRMISL---RFLQQHLLNPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWSPN-SPVQNART---------NHRMIFQ
        Q LL+E+  R+ I L   R LQQ    P       PP             +D+S LT+FLE D SFFSPWNWSPN +P+Q+ R          N RM+F 
Subjt:  QLLLKEADHRRMISL---RFLQQHLLNPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWSPN-SPVQNART---------NHRMIFQ

Query:  PDSFFAID--QELYNKK
          SFF+ D  QEL N +
Subjt:  PDSFFAID--QELYNKK
TrEMBL top hitse value%identityAlignment
A0A6J1D2W9 uncharacterized protein LOC1110170837.4e-0641.03Show/hide
Query:  QLLLKEADHRRMISL---RFLQQHLLNPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWSPN-SPVQNART---------NHRMIFQ
        Q LL+E+  R+ I L   R LQQ    P       PP             +D+S LT+FLE D SFFSPWNWSPN +P+Q+ R          N RM+F 
Subjt:  QLLLKEADHRRMISL---RFLQQHLLNPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWSPN-SPVQNART---------NHRMIFQ

Query:  PDSFFAID--QELYNKK
          SFF+ D  QEL N +
Subjt:  PDSFFAID--QELYNKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCGAGGACCAAGAGCAACTATGGCGGCAGCTACTTCTCAAAGAAGCCGACCACCGCCGTATGATCAGCCTGCGGTTTCTACAACAGCACCTCTTGAATCCGCT
GCCGCCGCCCTCACCGCAACCACCGCTGTGCGGAGAATTTGTGATTACTCGATTGGTTGAATCCGTGGATTTTTCTAGCCTAACTTCATTTCTTGAGGTCGATTACTCTT
TTTTTTCGCCTTGGAATTGGAGCCCTAATTCACCTGTACAAAATGCAAGAACAAATCACCGCATGATTTTTCAACCAGATTCATTCTTCGCCATTGATCAGGAATTGTAC
AATAAAAAAAGCTGCAAGGAGGTTGGGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCGAGGACCAAGAGCAACTATGGCGGCAGCTACTTCTCAAAGAAGCCGACCACCGCCGTATGATCAGCCTGCGGTTTCTACAACAGCACCTCTTGAATCCGCT
GCCGCCGCCCTCACCGCAACCACCGCTGTGCGGAGAATTTGTGATTACTCGATTGGTTGAATCCGTGGATTTTTCTAGCCTAACTTCATTTCTTGAGGTCGATTACTCTT
TTTTTTCGCCTTGGAATTGGAGCCCTAATTCACCTGTACAAAATGCAAGAACAAATCACCGCATGATTTTTCAACCAGATTCATTCTTCGCCATTGATCAGGAATTGTAC
AATAAAAAAAGCTGCAAGGAGGTTGGGATTTGAATAACCAATTTGTAGAATCTCCACTCTGTATCCAGGATGAATATTTTTATGCAGGTTTGTTGTTATTATTATTTATA
AATATTTATATTTATTCTTAGATAAAAAAAATAAATAGACTGAATTTTTGTTTATTTATTATTATTCAAATGTTGTGTTCATTATTTTGTTAAATTTATGAAAAATAATC
AACACTATCTAATGTCATGTTCATTATTTTGTTAAATTACA
Protein sequenceShow/hide protein sequence
MDFEDQEQLWRQLLLKEADHRRMISLRFLQQHLLNPLPPPSPQPPLCGEFVITRLVESVDFSSLTSFLEVDYSFFSPWNWSPNSPVQNARTNHRMIFQPDSFFAIDQELY
NKKSCKEVGI