CuGenDBv2

Gene ID	Lsi10G013790
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	CCHC-type domain-containing protein
Genome location	chr10:17927218..17929200
RNA-Seq Expression	Lsi10G013790
Synteny	Lsi10G013790
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7010551.1 CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-139

92.43

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQQNTASSEP+AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK
        RNFLSVKNDK+KDPEAIQADVMSELDKLKG  GKGNGKG VESDEESEEEESESSDSDADSEIERIIAEREGKR SKKRSLKRKDD VDDGSGSDSREKK
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK

Query:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR
        RGRSKRRS RR+SNDSDDSRRKRRKEKHRKRDDSSDEGE  +R HRKSRKEKRRRRSHR SDDSDSDTS E+H RHKHKSRK A +TDSE SSSDDTRGR
Subjt:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR

Query:  ARKRSEKRSRKHRYEDE
        ARKRSEKRSRKHRYE++
Subjt:  ARKRSEKRSRKHRYEDE

XP_004143115.1 CAX-interacting protein 4 [Cucumis sativus]

2.6e-145

95.54

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG
        RNFLSVKNDK+KDPEAIQADVMSELDKLKGGKG     VES+EESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDD SGSDSREKKRG
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG

Query:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK
        RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDE EKHRRHHRKSRKEKRRRRSHR SDDSDSDTS ETHGRHKHKSRKAA +TDSEASSSDDTRGRARK
Subjt:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK

Query:  RSEKRSRKHRYEDE
        RSEKRSRKHRYEDE
Subjt:  RSEKRSRKHRYEDE

XP_008464130.1 PREDICTED: CAX-interacting protein 4 [Cucumis melo]

1.9e-143

94.59

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG
        RNFLSVKNDK+KDPEAIQADVMSELDKLKGGKG     VES+EESEEEESE SDSDADSEIERIIAEREGKRNSKKRSLKRKDDS+DDGSGSDSREKKRG
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG

Query:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK
        RSKRRSRRDSND DDSRRKRRKEK RKRDDSSD+ EKHRRHHRKSRKEKRRRRSHR SDDSDSDTS ETHGRHKHKSRKAA +TDSEASSSDDTRGRARK
Subjt:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK

Query:  RSEKRSRKHRYEDE
        RSEKRSRKHRYEDE
Subjt:  RSEKRSRKHRYEDE

XP_022943818.1 CAX-interacting protein 4 [Cucurbita moschata]

3.1e-138

92.11

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQQNTASSEP+AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK
        RNFLSVKNDK+KDPEAIQADVMSELDKLKG  GKGNGKG VESDEESEEEESESSDSDADSEIERIIAEREGKR SKKRSLKRKDD VDDGSGSDSREKK
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK

Query:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR
        RGRSKRRS RR+SNDSDDSRRKRRKEKHRKRDDSSDEGE  +R HRKSRKEKRRRRSHR SDDSDSDTS E+H RHKHKS+KAA +TDSE SSS DTRGR
Subjt:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR

Query:  ARKRSEKRSRKHRYEDE
        ARKRSEKRSRKHRYE++
Subjt:  ARKRSEKRSRKHRYEDE

XP_038902835.1 CAX-interacting protein 4 [Benincasa hispida]

7.6e-145

95.54

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNT S+EPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG
        RNFLSVKN+K+KDPEAIQADVMSELDKLKGGKGNGKG VES EESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDD SGSDSREKKRG
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG

Query:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK
        RSKRRSRRD NDSDDSRRKRRKEKHRKRDDSSDE EKHRRHHRKSRKEKRRRRSHR SDDSDSDTS ETHGR KHKSRKAA +TDSEASSSDDTRGRARK
Subjt:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK

Query:  RSEKRSRKHRYEDE
        RSEKRSRKHRYEDE
Subjt:  RSEKRSRKHRYEDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHA7 CCHC-type domain-containing protein

1.3e-145

95.54

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG
        RNFLSVKNDK+KDPEAIQADVMSELDKLKGGKG     VES+EESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDD SGSDSREKKRG
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG

Query:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK
        RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDE EKHRRHHRKSRKEKRRRRSHR SDDSDSDTS ETHGRHKHKSRKAA +TDSEASSSDDTRGRARK
Subjt:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK

Query:  RSEKRSRKHRYEDE
        RSEKRSRKHRYEDE
Subjt:  RSEKRSRKHRYEDE

A0A1S3CL87 CAX-interacting protein 4

9.1e-144

94.59

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG
        RNFLSVKNDK+KDPEAIQADVMSELDKLKGGKG     VES+EESEEEESE SDSDADSEIERIIAEREGKRNSKKRSLKRKDDS+DDGSGSDSREKKRG
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG

Query:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK
        RSKRRSRRDSND DDSRRKRRKEK RKRDDSSD+ EKHRRHHRKSRKEKRRRRSHR SDDSDSDTS ETHGRHKHKSRKAA +TDSEASSSDDTRGRARK
Subjt:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK

Query:  RSEKRSRKHRYEDE
        RSEKRSRKHRYEDE
Subjt:  RSEKRSRKHRYEDE

A0A5D3DK91 CAX-interacting protein 4

9.1e-144

94.59

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG
        RNFLSVKNDK+KDPEAIQADVMSELDKLKGGKG     VES+EESEEEESE SDSDADSEIERIIAEREGKRNSKKRSLKRKDDS+DDGSGSDSREKKRG
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRG

Query:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK
        RSKRRSRRDSND DDSRRKRRKEK RKRDDSSD+ EKHRRHHRKSRKEKRRRRSHR SDDSDSDTS ETHGRHKHKSRKAA +TDSEASSSDDTRGRARK
Subjt:  RSKRRSRRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARK

Query:  RSEKRSRKHRYEDE
        RSEKRSRKHRYEDE
Subjt:  RSEKRSRKHRYEDE

A0A6J1FXE5 CAX-interacting protein 4

1.5e-138

92.11

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQQNTASSEP+AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK
        RNFLSVKNDK+KDPEAIQADVMSELDKLKG  GKGNGKG VESDEESEEEESESSDSDADSEIERIIAEREGKR SKKRSLKRKDD VDDGSGSDSREKK
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK

Query:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR
        RGRSKRRS RR+SNDSDDSRRKRRKEKHRKRDDSSDEGE  +R HRKSRKEKRRRRSHR SDDSDSDTS E+H RHKHKS+KAA +TDSE SSS DTRGR
Subjt:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR

Query:  ARKRSEKRSRKHRYEDE
        ARKRSEKRSRKHRYE++
Subjt:  ARKRSEKRSRKHRYEDE

A0A6J1JHW4 CAX-interacting protein 4

2.2e-137

91.48

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQQNTASSEP+AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK
        RNFLSVKNDK+KDPEAIQADVMSELDKLKG  GKGNGKG VESDEESEEEESESSDSDADSEIERIIAEREGKR SKKRSLKRKDD VDDGSGSDSREKK
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKG--GKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKK

Query:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR
        RGRSKRRS RR+SNDSDD+RRKRRKEKHRKRDDSSDEGEK +R HRKSRKEKRRRRSHR SDDSDSDTS E+H RHK K RKAA +TDS+ SSSDD RGR
Subjt:  RGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGR

Query:  ARKRSEKRSRKHRYEDE
        ARKRSEKRSRKHRYE++
Subjt:  ARKRSEKRSRKHRYEDE

SwissProt top hits

e value

%identity

Alignment

Q84Y18 CAX-interacting protein 4

3.8e-70

58.58

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   + QQ T     D EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRN-----SKKRSLKRKDDSVDDGSGSDSR
        RNFLS K DK+KDP AI+A V+S L+K++  +G GKG VE     EEEESESSDSD DSE+ERIIAER GK+       K  S+++K   V D S SDS 
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRN-----SKKRSLKRKDDSVDDGSGSDSR

Query:  E----------KKRGRSKRRSRRDSNDSDDSRRKRRKEKH-RKRD-DSSDEGEKH--RRHHRKSRKEKRRRRSHR-CSDDSDSDTSVETHGRHKHKSRKA
                   KKR   KRRS  +S D ++ R KRRKE+  RKRD D SDE E    RR  RKSRKEKRRRRS R  SDDSDS++S +   R + +  K 
Subjt:  E----------KKRGRSKRRSRRDSNDSDDSRRKRRKEKH-RKRD-DSSDEGEKH--RRHHRKSRKEKRRRRSHR-CSDDSDSDTSVETHGRHKHKSRKA

Query:  ALVTDSEASSSDDTRGR----ARKRSEKRSRKHRYEDE
        A  +DSEA+ S D   R    + KRSEK+SRK  +  E
Subjt:  ALVTDSEASSSDDTRGR----ARKRSEKRSRKHRYEDE

Arabidopsis top hits

e value

%identity

Alignment

AT2G28910.1 CAX interacting protein 4

2.7e-71

58.58

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   + QQ T     D EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRN-----SKKRSLKRKDDSVDDGSGSDSR
        RNFLS K DK+KDP AI+A V+S L+K++  +G GKG VE     EEEESESSDSD DSE+ERIIAER GK+       K  S+++K   V D S SDS 
Subjt:  RNFLSVKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRN-----SKKRSLKRKDDSVDDGSGSDSR

Query:  E----------KKRGRSKRRSRRDSNDSDDSRRKRRKEKH-RKRD-DSSDEGEKH--RRHHRKSRKEKRRRRSHR-CSDDSDSDTSVETHGRHKHKSRKA
                   KKR   KRRS  +S D ++ R KRRKE+  RKRD D SDE E    RR  RKSRKEKRRRRS R  SDDSDS++S +   R + +  K 
Subjt:  E----------KKRGRSKRRSRRDSNDSDDSRRKRRKEKH-RKRD-DSSDEGEKH--RRHHRKSRKEKRRRRSHR-CSDDSDSDTSVETHGRHKHKSRKA

Query:  ALVTDSEASSSDDTRGR----ARKRSEKRSRKHRYEDE
        A  +DSEA+ S D   R    + KRSEK+SRK  +  E
Subjt:  ALVTDSEASSSDDTRGR----ARKRSEKRSRKHRYEDE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCCTCAAGATGCCAGCAACAGCCGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACACAGTAGTGCTGCCCTACAGACACACGGTATATGGCAAAGTGCAAT
TGGGTATGACCCATATGCACCAAACAAGGATGATAACAAGAATTCTGCACAACAAAACACGGCTAGCTCTGAGCCAGATGCAGAGAATGCATATGCTAGCTTTCAGGGTC
TTCTTGCACTTGCTCGCATAACGGGTTCCAATGCTAATGAGGTTCGGGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGTTTCCAGTGCAGGAATTTCTTGAGT
GTTAAGAATGATAAGCAGAAAGACCCAGAAGCTATTCAGGCTGATGTTATGTCGGAGCTAGACAAATTAAAAGGAGGTAAGGGAAATGGGAAAGGTGGAGTGGAGAGTGA
TGAAGAGAGTGAGGAGGAAGAGAGTGAAAGTTCTGATTCAGATGCTGACTCAGAGATTGAGAGAATTATTGCTGAAAGGGAAGGGAAAAGAAATAGTAAGAAAAGGTCAT
TGAAAAGAAAGGATGATTCGGTCGATGATGGATCAGGTTCAGATTCAAGAGAGAAGAAGAGGGGGAGGTCAAAAAGGAGGAGCAGAAGAGATTCCAATGATTCAGATGAC
AGCAGAAGGAAGAGGAGAAAGGAGAAGCATAGGAAAAGAGACGATTCATCAGATGAGGGTGAAAAACATAGGCGTCATCATAGGAAGAGTAGAAAAGAGAAAAGAAGGAG
AAGAAGCCATAGATGTTCCGATGACTCAGATTCTGATACATCTGTGGAAACTCATGGAAGGCACAAACACAAGAGTAGGAAGGCTGCATTGGTAACTGATTCTGAAGCTA
GCAGTTCTGATGATACAAGGGGCAGGGCGAGGAAGCGTTCTGAAAAGAGAAGCAGGAAACATCGTTATGAGGATGAATAG

mRNA sequence

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Protein sequence

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MASLKMPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQQNTASSEPDAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLS
VKNDKQKDPEAIQADVMSELDKLKGGKGNGKGGVESDEESEEEESESSDSDADSEIERIIAEREGKRNSKKRSLKRKDDSVDDGSGSDSREKKRGRSKRRSRRDSNDSDD
SRRKRRKEKHRKRDDSSDEGEKHRRHHRKSRKEKRRRRSHRCSDDSDSDTSVETHGRHKHKSRKAALVTDSEASSSDDTRGRARKRSEKRSRKHRYEDE

Lsi10G013790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome