; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G013850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G013850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionflowering-promoting factor 1-like
Genome locationchr10:17965426..17965815
RNA-Seq ExpressionLsi10G013850
SyntenyLsi10G013850
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5540818.1 hypothetical protein DKX38_013792 [Salix brachista]4.4e-5178.57Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVW+FDKNGV RL++NPTRESFE K+PP+PGTATAPGARPRVLVYLP N VIRSY ELEQRL ELGWSRY N ++P LLQFH+S DSAHLISLPKNF 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDATSS
         FK +HMYDIVVKNR FF+VRD  +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDATSS

KAG5238222.1 flowering-promoting factor [Salix suchowensis]5.8e-5178.57Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVW+FDKNGV RL++NPTRESFE K+PP PGTATAPGARPRVLVYLP N VIRSY ELEQRL ELGWSRY N ++P LLQFH+S DSAHLISLPKNF 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDATSS
         FK +HMYDIVVKNR FF+VRD  +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDATSS

KAG6570697.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-6292.25Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVFDKNGVARLISNPTRESFECKDPP PGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRN AEP+LLQFHRSHDSAHLISLPK+FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDATSSQSS
        KFKPMHMYDIVVKNR FF+VRD  SS  S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDATSSQSS

OMO67780.1 hypothetical protein CCACVL1_20321 [Corchorus capsularis]6.8e-5281.97Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVW+FDK GVARLISNPTRESFE KDP  PGT+TAPGARPRVLVYLPTNQVIRSY+ELEQRLGELGW+RY NL++PELLQFH+S++S HLISLP+NFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
         F+ +HMYDIVVKNR FF+VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

XP_022148408.1 flowering-promoting factor 1-like [Momordica charantia]2.5e-5485.5Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKN
        MSGVWVFDKNGVARLI+NPTRESFE KDPP PGTATAPGARPRVLVYLP NQVI SYAELEQRLGELGW+RYRN  AEP EL++FHRSHDSA LISLPK+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKN

Query:  FAKFKPMHMYDIVVKNRQFFQVRDATSSQSS
        FAKFKPMHMYDIVVKNR FFQVRD  S+ +S
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRDATSSQSS

TrEMBL top hitse value%identityAlignment
A0A0A0KE84 Uncharacterized protein2.1e-6292.25Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVFDKNGVARLISNPTRESFECKDPP PGTATAPGARPRVLVYLPTNQVIRSYAELEQRL ELGW+RY NLAEP+LLQFHRSHDSAHLISLPK+FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDATSSQSS
        KFKPMHMYDIVVKNR FFQVRD TSS +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDATSSQSS

A0A1Q3CDF3 Uncharacterized protein6.2e-5179.37Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVW+FDKNGVARLI+NPTRESFE K+PP PGTATAPGARPRVLVYLP NQVIRSYAELEQRL ELGW+RY N  +P LLQFH+S +SAHLISLPKNFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDATSS
         FK +HMYDIVVKNR  F+VRD  ++
Subjt:  KFKPMHMYDIVVKNRQFFQVRDATSS

A0A1R3HBS3 Uncharacterized protein3.3e-5281.97Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVW+FDK GVARLISNPTRESFE KDP  PGT+TAPGARPRVLVYLPTNQVIRSY+ELEQRLGELGW+RY NL++PELLQFH+S++S HLISLP+NFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
         F+ +HMYDIVVKNR FF+VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

A0A5N5LE78 Uncharacterized protein2.1e-5178.57Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVW+FDKNGV RL++NPTRESFE K+PP+PGTATAPGARPRVLVYLP N VIRSY ELEQRL ELGWSRY N ++P LLQFH+S DSAHLISLPKNF 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDATSS
         FK +HMYDIVVKNR FF+VRD  +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDATSS

A0A6J1D405 flowering-promoting factor 1-like1.2e-5485.5Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKN
        MSGVWVFDKNGVARLI+NPTRESFE KDPP PGTATAPGARPRVLVYLP NQVI SYAELEQRLGELGW+RYRN  AEP EL++FHRSHDSA LISLPK+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKN

Query:  FAKFKPMHMYDIVVKNRQFFQVRDATSSQSS
        FAKFKPMHMYDIVVKNR FFQVRD  S+ +S
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRDATSSQSS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 12.2e-2448.78Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLPT +V+ SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLP++F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDA
        KF  ++MYDIVVKN  +F VRD+
Subjt:  KFKPMHMYDIVVKNRQFFQVRDA

O24340 Flowering-promoting factor 11.6e-2452.85Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVF KNGV RL+ NP           Q G  T   +R +V+VYLPT +VI SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLPK+F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDA
        KF  ++MYDIVVKN  +F VRD+
Subjt:  KFKPMHMYDIVVKNRQFFQVRDA

Q0E1D7 Flowering-promoting factor 1-like protein 39.7e-2550Show/hide
Query:  MSGVWVFDKNGVARLISNP-TRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNF
        M+GVWVF K+G+ R + NP + ES    D          G R +VLV++P+ +V+ SY  LE+RL ELGW RY  L +P LLQFH+   + HLIS+P++F
Subjt:  MSGVWVFDKNGVARLISNP-TRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNF

Query:  AKFKPMHMYDIVVKNRQFFQVRDATS
        +KFK +HMYDIVVK R  F+VRDA +
Subjt:  AKFKPMHMYDIVVKNRQFFQVRDATS

Q5Q0B3 Flowering-promoting factor 1-like protein 11.4e-2348.39Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKN
        MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP+++V+ SY  LE+ L  LGW RY +    + LLQFH+   S  LISLP++
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKN

Query:  FAKFKPMHMYDIVVKNRQFFQVRD
        F+KF  +HMYDIVVKN   F VRD
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRD

Q9LXB5 Flowering-promoting factor 1-like protein 21.5e-2248.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLPT + + SY+ LEQ L  LGW RY +  + +L+Q+H+   S  LISLP++F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
        KF  ++MYDIVVKN   F VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 19.9e-2548.39Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKN
        MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP+++V+ SY  LE+ L  LGW RY +    + LLQFH+   S  LISLP++
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKN

Query:  FAKFKPMHMYDIVVKNRQFFQVRD
        F+KF  +HMYDIVVKN   F VRD
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRD

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.1e-2348.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLPT + + SY+ LEQ L  LGW RY +  + +L+Q+H+   S  LISLP++F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
        KF  ++MYDIVVKN   F VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

AT5G24860.1 flowering promoting factor 11.5e-2548.78Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLPT +V+ SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLP++F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFA

Query:  KFKPMHMYDIVVKNRQFFQVRDA
        KF  ++MYDIVVKN  +F VRD+
Subjt:  KFKPMHMYDIVVKNRQFFQVRDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCTCGTTTAATATCGAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCACCCCAGCCAGGCACCGCCACCGC
GCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCAAGTGATCCGGTCCTACGCCGAACTGGAACAGCGGCTCGGCGAACTCGGGTGGAGCCGGTACCGGA
ATTTAGCCGAACCGGAGCTCCTCCAGTTCCACCGCTCTCATGACTCGGCTCACTTGATTTCTCTCCCCAAAAACTTCGCCAAATTCAAACCCATGCATATGTACGACATT
GTCGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGATGCCACGTCATCACAATCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCTCGTTTAATATCGAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCACCCCAGCCAGGCACCGCCACCGC
GCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCAAGTGATCCGGTCCTACGCCGAACTGGAACAGCGGCTCGGCGAACTCGGGTGGAGCCGGTACCGGA
ATTTAGCCGAACCGGAGCTCCTCCAGTTCCACCGCTCTCATGACTCGGCTCACTTGATTTCTCTCCCCAAAAACTTCGCCAAATTCAAACCCATGCATATGTACGACATT
GTCGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGATGCCACGTCATCACAATCTTCTTAG
Protein sequenceShow/hide protein sequence
MSGVWVFDKNGVARLISNPTRESFECKDPPQPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNLAEPELLQFHRSHDSAHLISLPKNFAKFKPMHMYDI
VVKNRQFFQVRDATSSQSS