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Lsi10G014000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G014000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMajor viral transcription factor
Genome locationchr10:18107185..18107604
RNA-Seq ExpressionLsi10G014000
SyntenyLsi10G014000
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061869.1 uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa]5.6e-5290.4Show/hide
Query:  MENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQRGIGFAAPGGWQHPAV
        MENE K RLPKPPTRLQKQAPASLHLDQLSSVSMSS S DT SKAILPLLSPLPLSPQPLPEIDGNRISA GNA  GGGGN DQRGIGF APGGWQHPAV
Subjt:  MENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQRGIGFAAPGGWQHPAV

Query:  AATFADPSTLFTFFQSQCIVTSNTP
        AATF DPSTLFTFFQSQCIV+SNTP
Subjt:  AATFADPSTLFTFFQSQCIVTSNTP

KAG6570684.1 hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia]4.0e-5074.1Show/hide
Query:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRG
        MNANQ+ VVDFLR +M+N+   R+PKPPTRLQKQAPA L+LDQLSSVSM S  T+T SK +LPLLSPLP SPQP PE +GNR+ ANGN    GGN DQRG
Subjt:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRG

Query:  IGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        I FA+PGGWQHPAVAAT+ADPSTLFTFFQS+CI+TS+TP
Subjt:  IGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]3.1e-5079.14Show/hide
Query:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRG
        MNANQ  VVDF   +ME EHK+RLPKPPTRLQKQAPASLHLDQL+SVSMSSGS D  SKAILPLLSPLP SPQP PE +GNR +ANGN   GG   DQRG
Subjt:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRG

Query:  IGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        I FA PGGWQHPAVA TFADPSTLFTFFQSQCIV S TP
Subjt:  IGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]1.0e-6190.71Show/hide
Query:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQR
        M+ANQTVVVDFLRGSMENE+K RLPKPPTRLQKQAPASLHLDQLSSVSMSS S D CSKAILPLLSPLPLSPQPLPEIDGNRISANGNA  GGGGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQR

Query:  GIGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        GIGF APGGWQHPAVAATF DPSTLFTFFQSQC+V+SNTP
Subjt:  GIGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]2.4e-6696.43Show/hide
Query:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQR
        MNANQTVV+DFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGS DTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA GGGGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQR

Query:  GIGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        GIGFAAPGGWQHPAVAATF DPSTLFTFFQSQCIVTSNTP
Subjt:  GIGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KBQ7 Uncharacterized protein5.0e-6290.71Show/hide
Query:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQR
        M+ANQTVVVDFLRGSMENE+K RLPKPPTRLQKQAPASLHLDQLSSVSMSS S D CSKAILPLLSPLPLSPQPLPEIDGNRISANGNA  GGGGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQR

Query:  GIGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        GIGF APGGWQHPAVAATF DPSTLFTFFQSQC+V+SNTP
Subjt:  GIGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

A0A5A7V856 Uncharacterized protein2.7e-5290.4Show/hide
Query:  MENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQRGIGFAAPGGWQHPAV
        MENE K RLPKPPTRLQKQAPASLHLDQLSSVSMSS S DT SKAILPLLSPLPLSPQPLPEIDGNRISA GNA  GGGGN DQRGIGF APGGWQHPAV
Subjt:  MENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAA-GGGGNVDQRGIGFAAPGGWQHPAV

Query:  AATFADPSTLFTFFQSQCIVTSNTP
        AATF DPSTLFTFFQSQCIV+SNTP
Subjt:  AATFADPSTLFTFFQSQCIVTSNTP

A0A6J1D5B7 uncharacterized protein LOC1110170714.0e-2771.7Show/hide
Query:  MNANQTVVVDFLRGSMENEHKA--RLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEID---GNRIS-ANGNAAGGGG
        MNANQ+ V+DFLR SME EHKA  R+PKPPTRLQKQAPASLHLDQ+SS SM+ G  +T SKAILPLLSPLPLSPQP PE +    NR+S AN NA  GGG
Subjt:  MNANQTVVVDFLRGSMENEHKA--RLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEID---GNRIS-ANGNAAGGGG

Query:  NVDQRG
          DQRG
Subjt:  NVDQRG

A0A6P3ZH11 uncharacterized protein LOC1074110182.4e-1652.46Show/hide
Query:  MENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRGIGFAAPG-GWQHPAV
        +  + +A+  KPPTRLQK+APASL LDQ+ + S ++ S +  SKAI PLLSPL LSPQPLPE+   R    G AA      D+R      P  GWQHPAV
Subjt:  MENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRGIGFAAPG-GWQHPAV

Query:  AATFADPSTLFTFFQSQCIVTS
          TF DPS+LF FFQSQC++ +
Subjt:  AATFADPSTLFTFFQSQCIVTS

A0A7J7DYM3 Uncharacterized protein1.2e-1545.16Show/hide
Query:  FLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRGIGFAAPGGWQ
        F R  ++ ++KAR+ KPPTRLQ+QAPA+LHLD +++   S       +   +PLLSPL +SP PLPE +     ANG++  G    +  G      GGWQ
Subjt:  FLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRGIGFAAPGGWQ

Query:  HPAVAATFADPSTLFTFFQSQCIV
        HPAVA  + +PS +F FFQSQC++
Subjt:  HPAVAATFADPSTLFTFFQSQCIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07473.1 unknown protein1.5e-0546.3Show/hide
Query:  KARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQP
        K+  P+ PTRLQKQAP +LHL  +        S+D      +PLLSPL +SP P
Subjt:  KARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQP

AT1G07476.1 unknown protein6.1e-0446.15Show/hide
Query:  KARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSP
        K+  P+ PTRLQ+QAPA+L+L ++        S D  + A +PLLSPL +SP
Subjt:  KARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAAATCAGACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAAAACGAACACAAAGCCAGATTACCTAAACCTCCAACCAGATTACAGAAGCAGGCGCCGGC
GAGTCTCCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGGTAGTACCGACACTTGTTCGAAGGCGATTCTTCCTCTCCTATCGCCACTCCCTTTATCGCCACAGC
CGTTGCCTGAAATTGACGGAAATAGAATATCCGCGAACGGAAATGCCGCAGGCGGCGGCGGTAATGTCGATCAAAGAGGTATAGGTTTTGCAGCTCCTGGTGGCTGGCAA
CATCCAGCAGTGGCGGCGACATTCGCCGATCCTTCCACACTGTTTACTTTCTTTCAATCGCAATGCATCGTAACCAGTAACACACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAAATCAGACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAAAACGAACACAAAGCCAGATTACCTAAACCTCCAACCAGATTACAGAAGCAGGCGCCGGC
GAGTCTCCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGGTAGTACCGACACTTGTTCGAAGGCGATTCTTCCTCTCCTATCGCCACTCCCTTTATCGCCACAGC
CGTTGCCTGAAATTGACGGAAATAGAATATCCGCGAACGGAAATGCCGCAGGCGGCGGCGGTAATGTCGATCAAAGAGGTATAGGTTTTGCAGCTCCTGGTGGCTGGCAA
CATCCAGCAGTGGCGGCGACATTCGCCGATCCTTCCACACTGTTTACTTTCTTTCAATCGCAATGCATCGTAACCAGTAACACACCGTAA
Protein sequenceShow/hide protein sequence
MNANQTVVVDFLRGSMENEHKARLPKPPTRLQKQAPASLHLDQLSSVSMSSGSTDTCSKAILPLLSPLPLSPQPLPEIDGNRISANGNAAGGGGNVDQRGIGFAAPGGWQ
HPAVAATFADPSTLFTFFQSQCIVTSNTP