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Lsi10G014100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G014100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:18190624..18190929
RNA-Seq ExpressionLsi10G014100
SyntenyLsi10G014100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061860.1 hypothetical protein E6C27_scaffold89G00980 [Cucumis melo var. makuwa]9.3e-0446.48Show/hide
Query:  SCTIKYSLGIKSSNSRTSE--------NQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSI
        S T+K  L + + +    E        +QI   +DE+E + TTAGD+LR GK R QQLPPTA+GGL  VSI
Subjt:  SCTIKYSLGIKSSNSRTSE--------NQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSI
KGN47113.1 hypothetical protein Csa_020985 [Cucumis sativus]5.2e-0746.46Show/hide
Query:  MATIDGRSNRNPSCFLSRSCTIKYSLGIKSSNSRTSENQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSIWANHITWSS-YLKIAIQW
        MATIDG SN N   FLS S                   QI   +DE+E + TT GD+LR GKARHQQLPPTA+GGL  VS     I  SS Y+ +   W
Subjt:  MATIDGRSNRNPSCFLSRSCTIKYSLGIKSSNSRTSENQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSIWANHITWSS-YLKIAIQW
TrEMBL top hitse value%identityAlignment
A0A0A0KC71 Uncharacterized protein2.5e-0746.46Show/hide
Query:  MATIDGRSNRNPSCFLSRSCTIKYSLGIKSSNSRTSENQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSIWANHITWSS-YLKIAIQW
        MATIDG SN N   FLS S                   QI   +DE+E + TT GD+LR GKARHQQLPPTA+GGL  VS     I  SS Y+ +   W
Subjt:  MATIDGRSNRNPSCFLSRSCTIKYSLGIKSSNSRTSENQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSIWANHITWSS-YLKIAIQW
A0A5A7V3K2 Uncharacterized protein4.5e-0446.48Show/hide
Query:  SCTIKYSLGIKSSNSRTSE--------NQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSI
        S T+K  L + + +    E        +QI   +DE+E + TTAGD+LR GK R QQLPPTA+GGL  VSI
Subjt:  SCTIKYSLGIKSSNSRTSE--------NQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATTGACGGCCGATCAAATCGAAATCCTAGCTGTTTCCTCAGCCGTAGCTGTACTATCAAGTATTCACTGGGTATTAAATCCAGTAATAGTCGAACATCTGA
AAATCAGATTGATATGGTAGAAGATGAAGAAGAAAAGGAGAATACCACCGCCGGCGATAAGCTCCGGAATGGGAAAGCCCGCCACCAGCAGCTTCCTCCGACGGCGAAAG
GAGGTTTATGCAACGTTTCGATCTGGGCGAATCACATCACATGGTCTTCGTACTTGAAAATTGCTATACAGTGGAATAGTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCATTGACGGCCGATCAAATCGAAATCCTAGCTGTTTCCTCAGCCGTAGCTGTACTATCAAGTATTCACTGGGTATTAAATCCAGTAATAGTCGAACATCTGA
AAATCAGATTGATATGGTAGAAGATGAAGAAGAAAAGGAGAATACCACCGCCGGCGATAAGCTCCGGAATGGGAAAGCCCGCCACCAGCAGCTTCCTCCGACGGCGAAAG
GAGGTTTATGCAACGTTTCGATCTGGGCGAATCACATCACATGGTCTTCGTACTTGAAAATTGCTATACAGTGGAATAGTGGATGA
Protein sequenceShow/hide protein sequence
MATIDGRSNRNPSCFLSRSCTIKYSLGIKSSNSRTSENQIDMVEDEEEKENTTAGDKLRNGKARHQQLPPTAKGGLCNVSIWANHITWSSYLKIAIQWNSG