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Lsi10G014300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G014300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:18388781..18390118
RNA-Seq ExpressionLsi10G014300
SyntenyLsi10G014300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
SPE56269.1 hypothetical protein SBV1_2320021 [Verrucomicrobia bacterium]2.1e-0635.04Show/hide
Query:  FNEVSRLPSAIAPLPGLIRKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFHFASQAS
        F +V + P   A +P ++  Q   ++   E+ PER  + +LGV  LPE+E+ADS L AG+DE +RVR V     + L    +  V  +   V    S+A+
Subjt:  FNEVSRLPSAIAPLPGLIRKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFHFASQAS

Query:  AGLNDVVSSAVARRHDQ
         G+++  +S +A RHDQ
Subjt:  AGLNDVVSSAVARRHDQ
TrEMBL top hitse value%identityAlignment
A0A2N9NP21 Uncharacterized protein1.0e-0635.04Show/hide
Query:  FNEVSRLPSAIAPLPGLIRKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFHFASQAS
        F +V + P   A +P ++  Q   ++   E+ PER  + +LGV  LPE+E+ADS L AG+DE +RVR V     + L    +  V  +   V    S+A+
Subjt:  FNEVSRLPSAIAPLPGLIRKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFHFASQAS

Query:  AGLNDVVSSAVARRHDQ
         G+++  +S +A RHDQ
Subjt:  AGLNDVVSSAVARRHDQ
A0A7C8ZVL2 Uncharacterized protein (Fragment)1.4e-0540.79Show/hide
Query:  RKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFH
        R Q L K++LPEI P+   E++L +S LP+QE+ D      SD++IRVR + T   +F  +Q ++ +F L   VFH
Subjt:  RKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTATTTTATTTAATGAAGTCTCAAGATTGCCTTCCGCCATAGCGCCGCTGCCTGGTCTGATAAGAAAGCAAAGCTTGAACAAAATCGTCCTTCCGGAAATCGG
GCCAGAGCGTTTCGCTGAAAAAGAACTCGGTGTAAGCAGATTGCCAGAGCAAGAAATTGCTGATTCGAAGCTCGCCGCTGGTTCTGATGAGGAGATCCGGGTGAGGAATG
TCCGTACATTTGGTTTCAAGTTCTTGTTCGATCAAGCTGTCGTCTATGTCTTCTACTTGAATCTCGTCGTTTTTCACTTTGCGAGCCAGGCTTCTGCAGGCTTGAACGAC
GTCGTATCTTCCGCTGTAGCTCGCCGCCACGATCAGTTGAAGTTTCGTGTTCGATTTTGTTCTTTCTACTGCTTCGTTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTATTTTATTTAATGAAGTCTCAAGATTGCCTTCCGCCATAGCGCCGCTGCCTGGTCTGATAAGAAAGCAAAGCTTGAACAAAATCGTCCTTCCGGAAATCGG
GCCAGAGCGTTTCGCTGAAAAAGAACTCGGTGTAAGCAGATTGCCAGAGCAAGAAATTGCTGATTCGAAGCTCGCCGCTGGTTCTGATGAGGAGATCCGGGTGAGGAATG
TCCGTACATTTGGTTTCAAGTTCTTGTTCGATCAAGCTGTCGTCTATGTCTTCTACTTGAATCTCGTCGTTTTTCACTTTGCGAGCCAGGCTTCTGCAGGCTTGAACGAC
GTCGTATCTTCCGCTGTAGCTCGCCGCCACGATCAGTTGAAGTTTCGTGTTCGATTTTGTTCTTTCTACTGCTTCGTTTATTAG
Protein sequenceShow/hide protein sequence
MGFILFNEVSRLPSAIAPLPGLIRKQSLNKIVLPEIGPERFAEKELGVSRLPEQEIADSKLAAGSDEEIRVRNVRTFGFKFLFDQAVVYVFYLNLVVFHFASQASAGLND
VVSSAVARRHDQLKFRVRFCSFYCFVY