; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G014670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G014670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationchr10:18806111..18806575
RNA-Seq ExpressionLsi10G014670
SyntenyLsi10G014670
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570631.1 hypothetical protein SDJN03_29546, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6888.31Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVVRRILILSPESELKRG+IYF+IPATSLPEKKRNAG+SLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
        S K K CT     A AD DSYLSDVVSDKKPSRR+RRG+RVVVWRP LESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED

XP_004149378.1 uncharacterized protein LOC101207122 [Cucumis sativus]7.6e-7492.86Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKKRNA  +LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
        SRKVK CTV+AV   AD DSYLSDVVSDKKPSRRERRGSRV+VWRPHLESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED

XP_008463824.1 PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo]4.2e-7292.95Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKKRNAG +LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAV-AAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED
        SRKVK CTV+AV  AAAD DSYLSDVVSDKKPSRRERR GSRV+VWRPHLESISED
Subjt:  SRKVKQCTVSAV-AAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED

XP_022944509.1 uncharacterized protein LOC111448946 [Cucurbita moschata]1.3e-6888.31Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVVRRILILSPESELKRG+IYF+IPATS PEKKRNAG+SLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
        S K K CT     A AD DSYLSDVVSDKKPSRR+RRG+RVVVWRPHLESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED

XP_038902054.1 uncharacterized protein LOC120088703 [Benincasa hispida]8.1e-7696.1Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAG +LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
        SRKVK CTV+AV+AAAD DSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED

TrEMBL top hitse value%identityAlignment
A0A0A0KBY5 Uncharacterized protein3.7e-7492.86Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKKRNA  +LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
        SRKVK CTV+AV   AD DSYLSDVVSDKKPSRRERRGSRV+VWRPHLESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED

A0A1S3CK32 uncharacterized protein LOC1035018742.0e-7292.95Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKKRNAG +LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAV-AAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED
        SRKVK CTV+AV  AAAD DSYLSDVVSDKKPSRRERR GSRV+VWRPHLESISED
Subjt:  SRKVKQCTVSAV-AAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED

A0A5A7UMR0 6,7-dimethyl-8-ribityllumazine synthase2.0e-7292.95Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKKRNAG +LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAV-AAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED
        SRKVK CTV+AV  AAAD DSYLSDVVSDKKPSRRERR GSRV+VWRPHLESISED
Subjt:  SRKVKQCTVSAV-AAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED

A0A6J1FWT9 uncharacterized protein LOC1114489466.1e-6988.31Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVVRRILILSPESELKRG+IYF+IPATS PEKKRNAG+SLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED
        S K K CT     A AD DSYLSDVVSDKKPSRR+RRG+RVVVWRPHLESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED

A0A6J1L2H4 uncharacterized protein LOC1114997991.3e-6383.87Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKK+N G + K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED
        S+K K    S  A   D  SYLSD+VSDKKPSRR+RR GSRVVVWRPHLESISED
Subjt:  SRKVKQCTVSAVAAAADVDSYLSDVVSDKKPSRRERR-GSRVVVWRPHLESISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein7.6e-4862.35Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNG+VEEI   ITAG++L+ANPNHVLSKP SQGVVR+ILILSPESELKRGSIYFLIP +SLPEKKR       TP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADV----------DSYLSDVVS------DKKPSRRERRGSRVVVWRPHLESISED
         RK      SA AA  ++          + YL +VVS      + +  RR  R + V  WRP L+SISED
Subjt:  SRKVKQCTVSAVAAAADV----------DSYLSDVVS------DKKPSRRERRGSRVVVWRPHLESISED

AT1G29195.1 unknown protein1.4e-3344.15Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSS-------QGVV--RRILILSPESELKRGSIYFLIPAT-------
        M  ++RCC+AC+LPCGALD+IRIVH NGHVEEI+  ITA +++KA+P HVL KPSS       + V+   +I+I+ PE+EL+RG IYFL+PAT       
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSS-------QGVV--RRILILSPESELKRGSIYFLIPAT-------

Query:  --SLPEKKRNAGASLKTPSRKVKQ-------CTVSAVAAAAD----------VDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISE
           +  +K NA A +K  S+  +Q       C         D           D YL++++S+K  ++++RR  RV VWRPHLESISE
Subjt:  --SLPEKKRNAGASLKTPSRKVKQ-------CTVSAVAAAAD----------VDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISE

AT2G30230.1 unknown protein3.4e-4857.14Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHV+EI  P+TAG++L+ANPNHVLSKP SQGVVR+ILILSPESELKRGSIYFLIP TS+PEKK       KT 
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTP

Query:  SRKVKQCTVSAVAAAADVDS-------------------YLSDVVSDKKPS---------RRERRGSRVVVWRPHLESISED
         RK  +C    + +  D++S                   YL DV+  +K S         R+  R + V  WRPHL+SI+ED
Subjt:  SRKVKQCTVSAVAAAADVDS-------------------YLSDVVSDKKPS---------RRERRGSRVVVWRPHLESISED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTCTTGATTTGATCCGAATCGTTCATTTGAACGGCCACGTCGAAGAAATTGCCCATCCGAT
CACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGGGTTGTTCGCCGGATTCTGATCCTCTCGCCGGAATCGGAGCTCAAAA
GGGGAAGTATTTATTTCTTGATTCCGGCGACTTCTCTGCCGGAGAAGAAAAGAAACGCCGGAGCCAGCCTTAAAACTCCGTCAAGAAAAGTCAAACAATGCACCGTCTCC
GCCGTGGCCGCCGCCGCAGACGTTGATTCTTACCTTTCCGATGTTGTCTCCGACAAGAAACCGTCGCGGCGGGAGCGCCGTGGCAGCCGGGTGGTCGTATGGCGGCCCCA
TTTAGAGAGCATTTCTGAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTCTTGATTTGATCCGAATCGTTCATTTGAACGGCCACGTCGAAGAAATTGCCCATCCGAT
CACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGGGTTGTTCGCCGGATTCTGATCCTCTCGCCGGAATCGGAGCTCAAAA
GGGGAAGTATTTATTTCTTGATTCCGGCGACTTCTCTGCCGGAGAAGAAAAGAAACGCCGGAGCCAGCCTTAAAACTCCGTCAAGAAAAGTCAAACAATGCACCGTCTCC
GCCGTGGCCGCCGCCGCAGACGTTGATTCTTACCTTTCCGATGTTGTCTCCGACAAGAAACCGTCGCGGCGGGAGCGCCGTGGCAGCCGGGTGGTCGTATGGCGGCCCCA
TTTAGAGAGCATTTCTGAAGACTAA
Protein sequenceShow/hide protein sequence
MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPATSLPEKKRNAGASLKTPSRKVKQCTVS
AVAAAADVDSYLSDVVSDKKPSRRERRGSRVVVWRPHLESISED