CuGenDBv2

Gene ID	Lsi10G014960
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	CBS domain-containing protein CBSX3, mitochondrial
Genome location	chr10:19160079..19163042
RNA-Seq Expression	Lsi10G014960
Synteny	Lsi10G014960
Gene Ontology terms	NA
InterPro domains	IPR000644 - CBS domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570609.1 CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-38

50.49

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP MRPAMLSRF+TS SS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

XP_004139921.3 CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus]

2.8e-41

53.4

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVID+KGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

XP_008456267.1 PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo]

9.6e-42

53.88

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

XP_022986939.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima]

7.6e-39

50.49

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP+MRPAMLSRF+TS SS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

XP_038900356.1 CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida]

5.3e-40

51.46

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS+NIEEHGFESTT+DDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVI++KGM+GMVSIGDVVRAVVSEHREELDRLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG88 Uncharacterized protein

2.8e-39

48.67

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -------------------------------------------------------------------------------NNRIRHIPVIDDKGMKGMVSI
                                                                                       +NRIRHIPVID+KGMKGMVSI
Subjt:  -------------------------------------------------------------------------------NNRIRHIPVIDDKGMKGMVSI

Query:  GDVVRAVVSEHREELDRLNAYIQGGY
        GDVVRAVVSEHREELDRLNAYIQGGY
Subjt:  GDVVRAVVSEHREELDRLNAYIQGGY

A0A1S3C2E8 CBS domain-containing protein CBSX3, mitochondrial

4.6e-42

53.88

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

A0A5A7SSJ5 CBS domain-containing protein CBSX3

4.6e-42

53.88

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

A0A6J1FUM7 CBS domain-containing protein CBSX3, mitochondrial-like

1.4e-38

50.49

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP MRPAMLSRF+TS SS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

A0A6J1JHG9 CBS domain-containing protein CBSX3, mitochondrial-like

3.7e-39

50.49

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP+MRPAMLSRF+TS SS NIEEHGFESTTIDDILKAKGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

SwissProt top hits

e value

%identity

Alignment

Q9LEV3 CBS domain-containing protein CBSX3, mitochondrial

1.3e-25

37.86

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQG +RSF+S GNVVK +VLQ +RV NP ++P++    S S     +EE GFESTTI D++K+KGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVI DKGM GMVSIGDVVRAVV EHREEL RLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

Arabidopsis top hits

e value

%identity

Alignment

AT1G47271.1 Cystathionine beta-synthase (CBS) family protein

1.1e-06

52.17

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Query:  NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY
        N IRH+PVID K + G++S+ DVV+A+V     EL RLN +I+G Y
Subjt:  NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY

AT5G10860.1 Cystathionine beta-synthase (CBS) family protein

9.3e-27

37.86

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------
        MQG +RSF+S GNVVK +VLQ +RV NP ++P++    S S     +EE GFESTTI D++K+KGK                                  
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGK----------------------------------

Query:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
                                                                   +NRIRHIPVI DKGM GMVSIGDVVRAVV EHREEL RLNA
Subjt:  -----------------------------------------------------------NNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

Sequences

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CDS sequence

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mRNA sequence

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ATGCAAGGTGCTGTGCGATCATTTCTATCACATGGAAACGTTGTGAAAACTGCTGTTCTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACG
CTTTTCAACATCGGCTAGTTCTGTAAACATTGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAATAATCGAATTAGGCACATAC
CTGTCATCGACGACAAGGGCATGAAAGGCATGGTGTCAATTGGGGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGGGAGGAGCTAGACCGCCTGAATGCTTATATTCAG
GGAGGTTATTGAGTTGCTGCTCTTGACTTTGGTTGCTTGGTGTATGATGTTTCAAAAAACCAGAATGCTTCAGCTCTTGTACATATGATGATGGCCTGGTATGCGCACTC
TCTTATTAATATGGTTGTGCTTCCTGTTGTTTCTAGTATAATAACAGACCGATGTTGTAATAATAGACGGTAACTTTGCTTTGGAAAATTTCACCTGAATTTGCATTGTG
GTTGATGGAGATGACTAAAATCTCCCTCCAGTTGGTGATTTACCAAAAATGAAGCAGAGAATTTCTGTTTAAATTGAGTTCGAGGAATCTCTTTGGATTTAACTTCAGGA
TTCTCTACCTTTTTATTACATTAATTTATACATAGGAAGTATTAAAATTTTCATTTATTTAGTATGATCTATTAGACAATTTGAATTTTGTATTTAAAAGAGTTTTGAAC
TTGACTAGCTTATGAATTTGGAAAAAAAATATTGAATAAAATCTAAGGGTCCGTTTGGATTGAATTTTTAAGTGTTTATAA

Protein sequence

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MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNIEEHGFESTTIDDILKAKGKNNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQ
GGY

Lsi10G014960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome