; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G015320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G015320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA polymerase zeta processivity subunit
Genome locationchr10:19708218..19711362
RNA-Seq ExpressionLsi10G015320
SyntenyLsi10G015320
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0010224 - response to UV-B (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016035 - zeta DNA polymerase complex (cellular component)
InterPro domainsIPR003511 - HORMA domain
IPR036570 - HORMA domain superfamily
IPR045091 - Mad2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947722.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata]1.6e-10486.9Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPSGAILSLI L              AFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

XP_022947726.1 DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata]3.7e-10183.84Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPS                      GAFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

XP_022970847.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita maxima]1.3e-10185.15Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPSGAILSLI L              AFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSY+SKVENSDLEFALR+FLIKLSV+EPLTK LP DCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSM+SQPLSLQLYLEHPSLSEPK CE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

XP_023532096.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo]1.1e-10083.41Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE V+ILVEFLEVAITSIVFLKGIYPS                      GAFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

XP_038900295.1 DNA polymerase zeta processivity subunit [Benincasa hispida]4.2e-10587.77Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRD KVP QGEIVQILVEFLEVAITS+VFLKGIYPS                      GAFER+RYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGT KDAESWIPTDTKQWQ+PPVI
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

TrEMBL top hitse value%identityAlignment
A0A0A0KEI1 HORMA domain-containing protein3.5e-9783.04Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKVP QGEI+QIL +FLEVAITSIVFLKGIYPS                      GAFER+RYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGD-NVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPV
        VERVAVIF N D NVQ+ERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSS T KDAESWIPTDTKQWQ+PPV
Subjt:  VERVAVIFFNGD-NVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPV

Query:  ITPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        ITPIKSM S+PLSLQLYLEHPSLSEP   E
Subjt:  ITPIKSMNSQPLSLQLYLEHPSLSEPKPCE

A0A6J1G790 DNA polymerase zeta processivity subunit isoform X21.8e-10183.84Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPS                      GAFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

A0A6J1G7Q4 DNA polymerase zeta processivity subunit isoform X17.8e-10586.9Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPSGAILSLI L              AFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSYESKVENSDLEFALR+FLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

A0A6J1I0B4 DNA polymerase zeta processivity subunit isoform X21.4e-9882.1Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPS                      GAFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSY+SKVENSDLEFALR+FLIKLSV+EPLTK LP DCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSM+SQPLSLQLYLEHPSLSEPK CE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

A0A6J1I6U9 DNA polymerase zeta processivity subunit isoform X16.2e-10285.15Show/hide
Query:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL
        MDSRDNKV  QGE VQILVEFLEVAITSIVFLKGIYPSGAILSLI L              AFER+RYMNAVVQ+ARHPELQDYIHSTVSGLLPFIQKGL
Subjt:  MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGL

Query:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI
        VERVAVIFFNG+N+QVERFVFKL VNQSY+SKVENSDLEFALR+FLIKLSV+EPLTK LP DCKWEITAYFQTLPSSGT KDAE WIPTDTKQWQ+PP+I
Subjt:  VERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVI

Query:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE
        TPIKSM+SQPLSLQLYLEHPSLSEPK CE
Subjt:  TPIKSMNSQPLSLQLYLEHPSLSEPKPCE

SwissProt top hitse value%identityAlignment
Q28H85 Mitotic spindle assembly checkpoint protein MAD2B3.1e-1831.46Show/hide
Query:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN
        +  IL EFLEVA+  I++++ +YP                       G F++++  N  VQ + HPEL  YI  T+  + P I+K  VE+V V+  + ++
Subjt:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN

Query:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTK--QWQEPPVITPIKS
          VERFVF++      S  S    S +E  LRAF++K+SV + +    PP C + +  + +   +    K        WI  D +    QEP +I P+K+
Subjt:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTK--QWQEPPVITPIKS

Query:  MNSQPLSLQLYLE
        M S  L +QLY+E
Subjt:  MNSQPLSLQLYLE

Q4KWZ6 Mitotic spindle assembly checkpoint protein MAD2B1.8e-1829.72Show/hide
Query:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN
        +  +L EFLEVA+  I++++ +YP                       G F++++  N  VQ + HPEL  YI  T+  + P ++K  VE+V V+  + ++
Subjt:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN

Query:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTKQ-WQEPPVITPIKSM
          VERFVF++T     S  S+   S +E  LRAF++K+SV + +    PP C + +  + +   +    K        WI  D +      P + P+K+M
Subjt:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTKQ-WQEPPVITPIKSM

Query:  NSQPLSLQLYLE
         S  L +QLY+E
Subjt:  NSQPLSLQLYLE

Q568H3 Mitotic spindle assembly checkpoint protein MAD2B1.1e-1830.19Show/hide
Query:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN
        +  IL EFLEVAI  I++++ IYPS                      G F++++  N  VQ + HP+L  YI  T+  + P I+K   E+V V+  N ++
Subjt:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN

Query:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTKQ-WQEPPVITPIKSM
          VERFVF+++     +  S+   S +E  LRA ++K+SV + +    PP C + +  + +   +    K        WI  D ++   E   + P+K+M
Subjt:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTKQ-WQEPPVITPIKSM

Query:  NSQPLSLQLYLE
         S  L +QLY+E
Subjt:  NSQPLSLQLYLE

Q8QFR4 Mitotic spindle assembly checkpoint protein MAD2B1.4e-1831.46Show/hide
Query:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN
        +  IL EFLEVA+  I++++ +YP+                      G F++++  N  VQ + HPEL  YI  T+  + P I+K  VE+V V+  + ++
Subjt:  IVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGDN

Query:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTK--QWQEPPVITPIKS
          VERFVF++      S  S    S +E  LRAF++K+SV + +    PP C + +  + +   +    K        WI  D +    QEP +I P+K+
Subjt:  VQVERFVFKLTVNQ--SYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRK----DAESWIPTDTK--QWQEPPVITPIKS

Query:  MNSQPLSLQLYLE
        M S  L +QLY+E
Subjt:  MNSQPLSLQLYLE

Q94FL5 DNA polymerase zeta processivity subunit3.8e-7263.08Show/hide
Query:  GEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNG
        GE+ + LV+F+EVAIT IV+LKG YPS                       AFER+RYMN VVQ+ARHPEL+DYIHS  SGLLPFI+KGLVERVAV+FF+ 
Subjt:  GEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNG

Query:  DNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVITPIKSMNSQPL
        DNV VERF+FK+T+  S  + VE   LEFALR+FLIKLSVS+ L K LP +C+WE+TAY ++LP  G+ K+AE WIPTDTKQWQ PPV+TP+KS+NS+PL
Subjt:  DNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVITPIKSMNSQPL

Query:  SLQLYLEHPSLSEP
         LQLYLEHPSLSEP
Subjt:  SLQLYLEHPSLSEP

Arabidopsis top hitse value%identityAlignment
AT1G16590.1 DNA-binding HORMA family protein2.7e-7363.08Show/hide
Query:  GEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNG
        GE+ + LV+F+EVAIT IV+LKG YPS                       AFER+RYMN VVQ+ARHPEL+DYIHS  SGLLPFI+KGLVERVAV+FF+ 
Subjt:  GEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNG

Query:  DNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVITPIKSMNSQPL
        DNV VERF+FK+T+  S  + VE   LEFALR+FLIKLSVS+ L K LP +C+WE+TAY ++LP  G+ K+AE WIPTDTKQWQ PPV+TP+KS+NS+PL
Subjt:  DNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVITPIKSMNSQPL

Query:  SLQLYLEHPSLSEP
         LQLYLEHPSLSEP
Subjt:  SLQLYLEHPSLSEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCAAGAGACAATAAAGTACCAGCTCAAGGTGAGATTGTTCAGATTCTAGTTGAATTCTTGGAGGTGGCCATTACATCAATCGTCTTCCTCAAAGGCATT
TACCCTTCTGGTGCTATTCTTTCTTTAATCTATCTGCCTAAGATCCTATTTTCTGCTTTATTTCTGGGAAAGGATGGTGCTTTTGAAAGGAAGAGGTACATGAAT
GCGGTTGTGCAGAAAGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTGCCTTTCATCCAAAAGGGACTGGTGGAGAGAGTGGCG
GTTATATTTTTCAACGGTGATAACGTCCAAGTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCGAAGGTCGAAAACTCTGACCTGGAGTTT
GCCTTACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAAGTTCTTCCTCCTGATTGCAAATGGGAAATAACTGCCTACTTCCAAACACTCCCA
AGTTCCGGTACAAGGAAGGATGCAGAGTCATGGATCCCAACAGATACCAAACAATGGCAAGAACCCCCAGTAATCACCCCCATCAAGTCCATGAACAGCCAACCC
CTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCTTGTGAATAA
mRNA sequenceShow/hide mRNA sequence
TTTAATTCGAAAGAAACCAAATTATTTGGTTATTTTCGGTTTCTCCATTTTCGAACCGAACTAGACATGATACCGTCTACTGCACTGCAATCGGAACTCAAATTC
GACACTGAAAAGGCCGCAGCATTTTACAGATTATGAAGCGGGACGATCCCTTTGCTACTTCAAGTTTCCATTTCTAAATATCAGAGCCATGTTTTAGCATTCAAA
TGGAGTGTGCTTGAGATCTTTTATGCAATTGGCTTAGATGTTTATGTTGAGAATTTGAACTTCTAGCTTAAAGACCATATCATTTGCTTCTTATTTAGCCGATGG
ACTCAAGAGACAATAAAGTACCAGCTCAAGGTGAGATTGTTCAGATTCTAGTTGAATTCTTGGAGGTGGCCATTACATCAATCGTCTTCCTCAAAGGCATTTACC
CTTCTGGTGCTATTCTTTCTTTAATCTATCTGCCTAAGATCCTATTTTCTGCTTTATTTCTGGGAAAGGATGGTGCTTTTGAAAGGAAGAGGTACATGAATGCGG
TTGTGCAGAAAGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCAGGGCTACTGCCTTTCATCCAAAAGGGACTGGTGGAGAGAGTGGCGGTTA
TATTTTTCAACGGTGATAACGTCCAAGTGGAGAGATTTGTTTTCAAGCTCACAGTGAACCAGTCTTATGAATCGAAGGTCGAAAACTCTGACCTGGAGTTTGCCT
TACGAGCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAAGTTCTTCCTCCTGATTGCAAATGGGAAATAACTGCCTACTTCCAAACACTCCCAAGTT
CCGGTACAAGGAAGGATGCAGAGTCATGGATCCCAACAGATACCAAACAATGGCAAGAACCCCCAGTAATCACCCCCATCAAGTCCATGAACAGCCAACCCCTGA
GTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCTTGTGAATAAATGTGCATTACTGAAAATATTTTGCTTAGATTGTTCAAATGAAAAATTT
CTTGAGCTTGTATGTTAGATCTTCTGGAAGCTGTTCATAGTGTATATATAAACTCAATAGACCAATTATTCCTTTGAAAGCCTCAAGATGTGTCTCAAGTTTCAA
TTTTGCAGCTAAAAGATTCTTTGTTTTTCAGTCTTTTTCAGTCTCTGCTATTATTGAGTGATATTGTATTTG
Protein sequenceShow/hide protein sequence
MDSRDNKVPAQGEIVQILVEFLEVAITSIVFLKGIYPSGAILSLIYLPKILFSALFLGKDGAFERKRYMNAVVQKARHPELQDYIHSTVSGLLPFIQKGLVERVA
VIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFALRAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTRKDAESWIPTDTKQWQEPPVITPIKSMNSQP
LSLQLYLEHPSLSEPKPCE