| GenBank top hits | e value | %identity | Alignment |
|---|
| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 5.0e-94 | 84.44 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRRW
KKPMF GRESASTS NTS+HM +RW
Subjt: KKPMFSGRESASTS-NTSSHMTRRW
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 2.7e-95 | 85.78 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRRW
KKPMFSGRESASTS NTS+HM +RW
Subjt: KKPMFSGRESASTS-NTSSHMTRRW
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 9.5e-93 | 84.38 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRR
KKPMF GRESASTS NTS+HM +R
Subjt: KKPMFSGRESASTS-NTSSHMTRR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 9.5e-93 | 84.38 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRR
KKPMF GRESASTS NTS+HM +R
Subjt: KKPMFSGRESASTS-NTSSHMTRR
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| XP_038900478.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] | 1.0e-94 | 86.22 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKMKDIEKNESKAADRIKQSYQKENAR YGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRRW
KKPMFSGRESASTS NTS+ M +RW
Subjt: KKPMFSGRESASTS-NTSSHMTRRW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 4.6e-93 | 84.38 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRR
KKPMF GRESASTS NTS+HM +R
Subjt: KKPMFSGRESASTS-NTSSHMTRR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 4.6e-93 | 84.38 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRR
KKPMF GRESASTS NTS+HM +R
Subjt: KKPMFSGRESASTS-NTSSHMTRR
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 2.4e-94 | 84.44 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKM+DIEKNESKAADRIKQSY KENAR GYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRRW
KKPMF GRESASTS NTS+HM +RW
Subjt: KKPMFSGRESASTS-NTSSHMTRRW
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 2.7e-85 | 76.44 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFG+EST V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
YEAKMKDIEKNES+AADRIKQSY KENAR GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWRRNAVQK+ DI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR-----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-ST
Query: KKPMFSGRESASTS-NTSSHMTRRW
KKPMFSGR+SASTS +T++HM R+W
Subjt: KKPMFSGRESASTS-NTSSHMTRRW
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| A0A6J1I4W9 transcription elongation factor B polypeptide 3 isoform X2 | 2.1e-85 | 76.79 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFG+EST V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENAR----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-STK
YEAKMKDIEKNES+AADRIKQSY KENAR GYG NV NTKNK+LKK+KIEVLQSQEMKNIKAWRRNAVQK+ DI STK
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENAR----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI-STK
Query: KPMFSGRESASTS-NTSSHMTRRW
KPMFSGR+SASTS +T++HM R+W
Subjt: KPMFSGRESASTS-NTSSHMTRRW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 5.8e-40 | 41.71 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+PITDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMKDIEKNESKAADRIKQSYQKENAR----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISTKKPMF
K+ +++ E + R+K+ Y+ EN R GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS IST K
Subjt: KMKDIEKNESKAADRIKQSYQKENAR----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISTKKPMF
Query: SGRESASTSNT
S STS +
Subjt: SGRESASTSNT
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 6.4e-39 | 40.76 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+PITDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMKDIEKNESKAADRIKQSYQKENAR----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISTKKPMF
K+ +++ E + R+K+ Y+ EN R GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS IS K
Subjt: KMKDIEKNESKAADRIKQSYQKENAR----------------------IGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISTKKPMF
Query: SGRESASTSNT
+ STS +
Subjt: SGRESASTSNT
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