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Lsi10G015740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G015740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:20214097..20214456
RNA-Seq ExpressionLsi10G015740
SyntenyLsi10G015740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575830.1 hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0832.73Show/hide
Query:  SSDYTMSNRLESREMNGTLRLEEN--ELGVRNNILDYFTREEVKKVMKDPGKGIKITIYDETRNEKRTTRMKRASKEEIFHIEWNIEGKEYVVGDQILKY
        + D+TM  +LE  +MNG L+L E+  +  +R N+ +++ R +V+ + +  G  ++I +YD   ++   T M+       +HIEW+I+ K Y  GD +L +
Subjt:  SSDYTMSNRLESREMNGTLRLEEN--ELGVRNNILDYFTREEVKKVMKDPGKGIKITIYDETRNEKRTTRMKRASKEEIFHIEWNIEGKEYVVGDQILKY

Query:  WDTINRRLCY
        WD    RL Y
Subjt:  WDTINRRLCY

KAG6575832.1 hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0832.71Show/hide
Query:  YTMSNRLESREMNGTLRLEENEL--GVRNNILDYFTREEVKKVMKDPGKGIKITIYDETRNEKRTTRMKRASKEEIFHIEWNIEGKEYVVGDQILKYWDT
        +TM  +L+  +MNG L+L E+++   +  N+  +++R +V+ + K  G   KIT++DE  NE   T ++       +HIEW+++ K Y  G  +L  WD 
Subjt:  YTMSNRLESREMNGTLRLEENEL--GVRNNILDYFTREEVKKVMKDPGKGIKITIYDETRNEKRTTRMKRASKEEIFHIEWNIEGKEYVVGDQILKYWDT

Query:  INRRLCY
           RL Y
Subjt:  INRRLCY

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTGAAAGTAGCGATTACACAATGAGTAACAGGTTGGAATCAAGGGAGATGAATGGAACGTTGAGACTGGAAGAAAATGAATTGGGAGTGAGAAATAATATATT
GGATTACTTCACGAGAGAAGAAGTGAAGAAGGTGATGAAAGATCCAGGAAAAGGAATTAAAATCACTATTTACGATGAGACAAGAAATGAAAAAAGGACAACGAGAATGA
AGAGAGCTTCAAAAGAAGAAATATTTCATATAGAATGGAACATTGAAGGAAAAGAGTATGTGGTTGGTGACCAAATTTTAAAGTATTGGGATACAATTAACAGGAGATTG
TGTTACAATCCTTCCAAATTCACCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTGAAAGTAGCGATTACACAATGAGTAACAGGTTGGAATCAAGGGAGATGAATGGAACGTTGAGACTGGAAGAAAATGAATTGGGAGTGAGAAATAATATATT
GGATTACTTCACGAGAGAAGAAGTGAAGAAGGTGATGAAAGATCCAGGAAAAGGAATTAAAATCACTATTTACGATGAGACAAGAAATGAAAAAAGGACAACGAGAATGA
AGAGAGCTTCAAAAGAAGAAATATTTCATATAGAATGGAACATTGAAGGAAAAGAGTATGTGGTTGGTGACCAAATTTTAAAGTATTGGGATACAATTAACAGGAGATTG
TGTTACAATCCTTCCAAATTCACCCCTTAG
Protein sequenceShow/hide protein sequence
MTSESSDYTMSNRLESREMNGTLRLEENELGVRNNILDYFTREEVKKVMKDPGKGIKITIYDETRNEKRTTRMKRASKEEIFHIEWNIEGKEYVVGDQILKYWDTINRRL
CYNPSKFTP