; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi10G015880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G015880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:20369866..20373109
RNA-Seq ExpressionLsi10G015880
SyntenyLsi10G015880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570533.1 hypothetical protein SDJN03_29448, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6072.49Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQK-------NVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDV
        MEDHRK+N ERLR KK NKISLEDYLDFFSS+KQ FLPV  L+QIIRMHGYMNIKG K       NV+++AV +I+L+NLSRSTLKES+SSSASI L+DV
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQK-------NVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDV

Query:  ISDLKNLDWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        ISDLK L+WQEC VTSVL FSSWKQNNSD SPD Q+PT ASKK   KLR+ +EC+ +E+EA DGVSSS ASKKPG   E Q KRKKTAA
Subjt:  ISDLKNLDWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

XP_022944661.1 uncharacterized protein LOC111449050 [Cucurbita moschata]4.9e-6476.92Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL
        MEDHRK+N ERLR KK NKISLEDYLDFFSS+KQ FLPV  L+QIIRMHGYMNIKG KNV++DAV TI+L+NLSRSTLKES+SSSASI L+DVISDLKNL
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL

Query:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        +WQEC VTSVL FSSWKQNNSD SPD Q+PT ASKK GKKLR+ +E + +E+E  DGVSSS ASKKPG   E Q KRKKTAA
Subjt:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

XP_022986041.1 uncharacterized protein LOC111483895 [Cucurbita maxima]9.9e-6576.92Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL
        MED RK+  ERLR KK NKISLEDYLDFFSS+KQ FLPV  L+QIIRMHGYMNIKG KNV+++AV TI+L+NLSRSTLKES+SSSASI L+DVISDLKNL
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL

Query:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        +WQEC VTSVL FSSWKQNNSDPSPD Q+PT ASKK GKKLR+ +EC+ +E+EA DGVSSS ASKKPG   E Q KRKKTAA
Subjt:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

XP_023512485.1 uncharacterized protein LOC111777222 [Cucurbita pepo subsp. pepo]2.0e-6576.92Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL
        MEDHRK+N ERLR KK NKISLEDYLDFFSS+KQ FLPV  L+QIIRMHGYMNIKG KNV++DAV TI+L+NLSRSTLKES+SSSASI L+DVISDLKNL
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL

Query:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        +WQEC VTSVL FSSW QNNSDPSPD ++PT ASKK GKKLR+ +EC+ +E+EA DGVSSS ASKK G   E Q KRKKTAA
Subjt:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

XP_038902525.1 uncharacterized protein LOC120089183 [Benincasa hispida]3.0e-7786.26Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL
        M+DH K+N ERLRKKKKNKISLEDYLDFFSS KQNFL VN LSQIIRMHGYMNIKG KNVL DAVNTIDLINLSRSTLKES+SSSA+IPL+ VISDL+NL
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL

Query:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        +WQECCVTSVL F+SWKQNNSDPSPDHQKPT ASKKP KKLRLP EC GEEIEA DGVSSSSASKKPG  LEPQ KRKKTAA
Subjt:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

TrEMBL top hitse value%identityAlignment
A0A6A1VCA4 Uncharacterized protein2.3e-2243.24Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNI-KGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKN
        ME  R+    ++R  K +KISLE+Y++F  S KQ  L  + L+QII MHG+  + +  KNVL DAV T+DL++ SRSTL ESVSS   + L+DVI+DL +
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNI-KGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKN

Query:  LDWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSS--ASKKPGCKLEPQIKRKKTAA
        L+WQECCVTS+ T  SW  + S P P+   P  +  K              E+   DG SSS    SK  G   +   KRK+T A
Subjt:  LDWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSS--ASKKPGCKLEPQIKRKKTAA

A0A6J1D6A0 uncharacterized protein LOC1110180223.3e-5070.48Show/hide
Query:  KNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNLDWQECCVTSVLTFSSW
        K+KISLEDYLDFFSSN Q  L VN L+QII+MHGY  I  QK+VLR+AV+ IDLIN SRSTL+ESVSSSASIPL+DVISDLK+LDW ECC TSV+TFSS 
Subjt:  KNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNLDWQECCVTSVLTFSSW

Query:  KQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
         QN+S PSPDHQ+PT ASKKP +KLR   E   +   A DGVSSS ASK    KL PQ KRKKTAA
Subjt:  KQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

A0A6J1FV08 uncharacterized protein LOC1114490502.4e-6476.92Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL
        MEDHRK+N ERLR KK NKISLEDYLDFFSS+KQ FLPV  L+QIIRMHGYMNIKG KNV++DAV TI+L+NLSRSTLKES+SSSASI L+DVISDLKNL
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL

Query:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        +WQEC VTSVL FSSWKQNNSD SPD Q+PT ASKK GKKLR+ +E + +E+E  DGVSSS ASKKPG   E Q KRKKTAA
Subjt:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

A0A6J1J9Y9 uncharacterized protein LOC1114838954.8e-6576.92Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL
        MED RK+  ERLR KK NKISLEDYLDFFSS+KQ FLPV  L+QIIRMHGYMNIKG KNV+++AV TI+L+NLSRSTLKES+SSSASI L+DVISDLKNL
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNL

Query:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA
        +WQEC VTSVL FSSWKQNNSDPSPD Q+PT ASKK GKKLR+ +EC+ +E+EA DGVSSS ASKKPG   E Q KRKKTAA
Subjt:  DWQECCVTSVLTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA

A0A7N2MCL3 Uncharacterized protein2.3e-2251.88Show/hide
Query:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNI-KGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKN
        ME   ++ +    K +  K+SLE+Y+DF  SNKQ  L VN L+QII MHG+  I K QK VL DAVNT+DL++ SRSTL ++VS  A + L+DVI DL +
Subjt:  MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNI-KGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKN

Query:  LDWQECCVTSVLTFSSWKQNN--SDPSPDHQKP
        L+WQECCVTS+ T  SWK     S  +PD  KP
Subjt:  LDWQECCVTSVLTFSSWKQNN--SDPSPDHQKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06320.1 unknown protein1.7e-1739.06Show/hide
Query:  KNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNI-KGQKNVLRDAVNTIDLINLSRSTLK---ESVSSSASIPLQDVISDLKNLDWQECCVTSVLT
        + KI++E+Y++F +S       +  L+QI+ +HG+  + K QK ++ +AV+++DL++LSRSTLK   +S  SS+S+ L +VISD++ L WQECC TS+  
Subjt:  KNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNI-KGQKNVLRDAVNTIDLINLSRSTLK---ESVSSSASIPLQDVISDLKNLDWQECCVTSVLT

Query:  FSSWKQNNSDPSPDHQKPTRASKKPGKK
         +S +   S+ S   QK  +  K   KK
Subjt:  FSSWKQNNSDPSPDHQKPTRASKKPGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCACCGAAAAGAGAACATAGAACGGCTCCGGAAGAAGAAGAAGAATAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCCAACAAGCAAAATTTCCT
CCCCGTCAATTCTCTCAGTCAGATCATTCGCATGCACGGCTACATGAACATCAAAGGTCAGAAGAATGTATTGAGGGATGCCGTAAACACAATTGATCTGATCAACCTCT
CTCGTTCCACACTCAAAGAGAGCGTCTCATCCTCCGCGTCCATTCCGCTTCAGGACGTAATTTCGGACCTGAAAAACCTTGATTGGCAAGAATGCTGTGTAACATCGGTT
CTGACTTTCAGTTCCTGGAAGCAGAATAACTCCGATCCGAGTCCGGACCACCAAAAGCCGACACGTGCTTCAAAGAAGCCAGGAAAGAAATTACGACTGCCAACAGAATG
TCATGGTGAAGAAATCGAGGCCACTGATGGAGTTTCCTCCTCTTCTGCCTCGAAAAAGCCGGGATGTAAATTAGAACCTCAGATTAAAAGAAAGAAAACAGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GTCAGTCTCGCCAATTGATAACAAACTAAAATTCTGTGAGTTCCATTGGCGCGCTAATCAGAACACACAACGAAGCTGCCATGGAGGATCACCGAAAAGAGAACATAGAA
CGGCTCCGGAAGAAGAAGAAGAATAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCCAACAAGCAAAATTTCCTCCCCGTCAATTCTCTCAGTCAGATCATTCG
CATGCACGGCTACATGAACATCAAAGGTCAGAAGAATGTATTGAGGGATGCCGTAAACACAATTGATCTGATCAACCTCTCTCGTTCCACACTCAAAGAGAGCGTCTCAT
CCTCCGCGTCCATTCCGCTTCAGGACGTAATTTCGGACCTGAAAAACCTTGATTGGCAAGAATGCTGTGTAACATCGGTTCTGACTTTCAGTTCCTGGAAGCAGAATAAC
TCCGATCCGAGTCCGGACCACCAAAAGCCGACACGTGCTTCAAAGAAGCCAGGAAAGAAATTACGACTGCCAACAGAATGTCATGGTGAAGAAATCGAGGCCACTGATGG
AGTTTCCTCCTCTTCTGCCTCGAAAAAGCCGGGATGTAAATTAGAACCTCAGATTAAAAGAAAGAAAACAGCTGCTTAAAGTGTGGTTGTTTCTGTTATTGTTCTACATT
CGCATCATTTTGGAGTTAGGACTGGTTAAATCCTTCAAGGCACAGCAGCAACAGCCGATCTCACAAGCTCCGGCGCCGCCACCGTCCCTTCATGGCCGTCACTCTCTGCC
ACATCAACGGTATTCTTCTTTTCCCTACTCTTCCACAACTGTCTCATTCTCTCCCTAACCTCACAAACCAATTCCTCGTGCGGCCCCTCACAAAACCCACACCGGATAAA
GCCCTTTTTGCCGGATGTACGGACGCTCCTTACTTGTTCGAACCCAAATGCAAGTCTCAATGCCTCGTTCAATGAACTGGGTTTCTGTGGAATCATCCATTCCTTAAACT
CTTCCCTCAATCCGTCAACGAAAATCGCCTTCAACAAGCCATCGGAAAGTGGATTACCCGGTGGCCATTTCTTCAAAATCAACTGCAACCTCAGAAAATATGAACGTACA
TTCTCCTCTTGCCGTTGATTTATCGTCATAAGCTCCGATCGCAACTGATCAGTCAATTCAATTATATTGAAAGCGTCCAAGAAACAAGACTTCAATTCTTCCCAAGATAT
CGGAGGGTAGGGCTCGATGTTCAAGTCGTACCAAAGCGCCGCCTCACCCTCTAACGTCACCGGGAAGATTCTCATCATCACGTCGACGGAGGACGCATTGTTCGCACGGC
AGACTTTGGCGAATCTGCTTAAATGTATAACCGGACACTCATCGGCGCCGCCGTGAAAAATCGGCAATGGTGCCACGTTGATGTATGGAAATACAGTTTGGGCGGCGTTT
GGAGTCTGTAAATACGTTGGACTGTTGTTGGAGGCGGATTCTGCGGCGGTTCTTAAATCGGAGGGCTTGATTTCTAGGGATCTTGATTTGGGGTCAGTGGGTTGGGAGTT
AACAGATTCAGAGGCGTCATAGTCGTCTTCGTTGGATGCATAGAGCGATTGAGATGGAGAAGCATCGTAATCGGTGCCGGTGGTATAATCGATATTACGTCGCCGGAATG
GCAATGGCGGTGGTGAACGCCTGAGTTTTCGCGCCATCCGAAAGTGAAGAAATTGAGGAAAGAAATGGATCTATACAGAATTTGAAGGAACGGAAACGGTCTGTTCAAAG
AAGTGGGATTACTCGGTGCTTGTAGTTCATAGCAGGCATAAACCAACGTTCGTGTCTGTTGGACTTTATGGGCTTTGTGGTTTGTTGGGCCCAGTTGTGCAACCATCGTT
CTGGAAAGACGACATGTCGGCATGCAGTTAGTCTTGAATATAAAATGAAAATGTCAATTTATATCCCTAAACTTTAGGAGTTGTATAAATTTAAACCCGAACTTTTATAA
GTGTGTCAATTTATACTCTCTATTACATTCTGCTTGAAAAAAATCTAATATAAAACTTATAATTGTATCAATTAAACATCTAAGTATTTAGAAATAATGAATCAATTTAT
ACTCTT
Protein sequenceShow/hide protein sequence
MEDHRKENIERLRKKKKNKISLEDYLDFFSSNKQNFLPVNSLSQIIRMHGYMNIKGQKNVLRDAVNTIDLINLSRSTLKESVSSSASIPLQDVISDLKNLDWQECCVTSV
LTFSSWKQNNSDPSPDHQKPTRASKKPGKKLRLPTECHGEEIEATDGVSSSSASKKPGCKLEPQIKRKKTAA