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Lsi10G015940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G015940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr10:20442391..20442627
RNA-Seq ExpressionLsi10G015940
SyntenyLsi10G015940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0460.47Show/hide
Query:  MGRLIVAT----IGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRR---GGDDGGGGDGCGG--CGGGGCGGGGGGGG
        MGR I A     +GDVT  SSGGL L + +LLS+SL+SMIIFACG S    +R+   GG  GGGG GCGG   GGGGCGGGGGG G
Subjt:  MGRLIVAT----IGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRR---GGDDGGGGDGCGG--CGGGGCGGGGGGGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]4.2e-0457.69Show/hide
Query:  MGRLIVAT----IGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGG
        MGR I A     +GDVT  SSGGL L + IL+S+SL+SMIIFACG S    +R+    GGG     GCGGGGCGGGGG
Subjt:  MGRLIVAT----IGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0767.9Show/hide
Query:  MGRLIVATIG------DVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCG-GGGCGGGGG
        MGR I+A  G      DVT VSSGGLFL S ILLSISL+SMIIFACG+S DP+R+ GG   GGGDG GG G GGGCGG GG
Subjt:  MGRLIVATIG------DVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCG-GGGCGGGGG

KGN61189.1 hypothetical protein Csa_006542 [Cucumis sativus]7.9e-1175.64Show/hide
Query:  MGRLIVATIGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGGGGGD
        MGR I ATIGDVTT   GGL L SLILLSISL+SMIIFAC +  + RRRRGGDDGG G GC  CGGGGCGGGG GGGD
Subjt:  MGRLIVATIGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGGGGGD

TrEMBL top hitse value%identityAlignment
A0A0A0LJD5 Uncharacterized protein3.8e-1175.64Show/hide
Query:  MGRLIVATIGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGGGGGD
        MGR I ATIGDVTT   GGL L SLILLSISL+SMIIFAC +  + RRRRGGDDGG G GC  CGGGGCGGGG GGGD
Subjt:  MGRLIVATIGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGGGGGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGCTAATTGTTGCTACCATCGGAGATGTTACCACGGTCAGCTCTGGAGGCTTATTTTTGTTTTCTCTCATTCTTTTATCCATCTCTCTCATGTCAATGATAAT
ATTTGCTTGCGGCCACTCCCTTGATCCTAGGAGGAGAAGAGGCGGAGACGATGGTGGTGGAGGCGATGGATGTGGTGGCTGTGGCGGTGGAGGTTGTGGCGGCGGAGGAG
GTGGCGGCGGAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGCTAATTGTTGCTACCATCGGAGATGTTACCACGGTCAGCTCTGGAGGCTTATTTTTGTTTTCTCTCATTCTTTTATCCATCTCTCTCATGTCAATGATAAT
ATTTGCTTGCGGCCACTCCCTTGATCCTAGGAGGAGAAGAGGCGGAGACGATGGTGGTGGAGGCGATGGATGTGGTGGCTGTGGCGGTGGAGGTTGTGGCGGCGGAGGAG
GTGGCGGCGGAGACTAA
Protein sequenceShow/hide protein sequence
MGRLIVATIGDVTTVSSGGLFLFSLILLSISLMSMIIFACGHSLDPRRRRGGDDGGGGDGCGGCGGGGCGGGGGGGGD