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Lsi10G015950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G015950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLoricrin-like
Genome locationchr10:20447306..20447802
RNA-Seq ExpressionLsi10G015950
SyntenyLsi10G015950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN80674.1 hypothetical protein VITISV_002981 [Vitis vinifera]3.7e-0555.22Show/hide
Query:  GDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC
        G + LVSSGGLFLL +I +++S+ISMVIFAC   NSG  +KK+GD V    G   G  GCGC   GC
Subjt:  GDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]4.0e-0752.05Show/hide
Query:  ILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        I  A G G GDV L SSGGL LL+ +LLS+SL+SM+IFACG+S    K++ +G     G   G  GCG DV G
Subjt:  ILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0855.07Show/hide
Query:  PILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCG
        PI  A G G GDV L SSGGL LL+ IL+S+SL+SM+IFACG+S    K++ +G    AG  CG  GCG
Subjt:  PILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1059.74Show/hide
Query:  PILGAT--GAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC
        PIL A   G GF DV LVSSGGLFLLS ILLSISL+SM+IFACGNS + ++K G G     G+  G  GCG    GC
Subjt:  PILGAT--GAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC

KGN61189.1 hypothetical protein Csa_006542 [Cucumis sativus]6.3e-0550.75Show/hide
Query:  AGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        A  GDV     GGL LLS+ILLSISL+SM+IFAC N   ++++RG     + G +CG  GCG   CG
Subjt:  AGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

TrEMBL top hitse value%identityAlignment
A0A061DKB8 Uncharacterized protein4.4e-0451.35Show/hide
Query:  LGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        LG +GAG G+  +  SGGLFLL +I+ S+S+ISMVIFACG  NSG+ +   G G     G  CG  G GC  CG
Subjt:  LGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

A0A0A0LJD5 Uncharacterized protein3.1e-0550.75Show/hide
Query:  AGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG
        A  GDV     GGL LLS+ILLSISL+SM+IFAC N   ++++RG     + G +CG  GCG   CG
Subjt:  AGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCG

A0A5N5GEI7 Loricrin-like5.8e-0449.32Show/hide
Query:  LGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACG-NSGESQKKRGDGVAVSAGESCGSEGCGC
        +G  G   G+V +V    +SGGL LL +IL+S+SLISMVIFACG + G + K+RG G A      CG  G GC
Subjt:  LGATGAGFGDVNLV----SSGGLFLLSVILLSISLISMVIFACG-NSGESQKKRGDGVAVSAGESCGSEGCGC

A5B1D1 Uncharacterized protein1.8e-0555.22Show/hide
Query:  GDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC
        G + LVSSGGLFLL +I +++S+ISMVIFAC   NSG  +KK+GD V    G   G  GCGC   GC
Subjt:  GDVNLVSSGGLFLLSVILLSISLISMVIFACG--NSGESQKKRGDGVAVSAGESCGSEGCGCDVCGC

M5WY52 Uncharacterized protein4.4e-0461.11Show/hide
Query:  SSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGC
        +SGG+FLL +ILLS+SLISMVIFACG+   S KKR  G   S G  CG  G GC
Subjt:  SSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCAAGGGTCTTCCAAATTAGGATCAGAACAGAAAGTCATTCCTGTTGGAGCCCATAAAATAATAATGCCAATTCTTGGTGCCACCGGCGCTGGCTTCGGAGATGT
CAACTTGGTGAGCTCCGGGGGCCTATTTTTGCTATCCGTCATCTTACTATCCATCTCTCTCATATCAATGGTCATATTTGCTTGCGGCAACTCCGGTGAGTCTCAAAAGA
AAAGAGGTGATGGCGTCGCCGTCAGCGCCGGCGAAAGTTGCGGCAGCGAAGGTTGTGGGTGCGATGTCTGTGGGTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCAAGGGTCTTCCAAATTAGGATCAGAACAGAAAGTCATTCCTGTTGGAGCCCATAAAATAATAATGCCAATTCTTGGTGCCACCGGCGCTGGCTTCGGAGATGT
CAACTTGGTGAGCTCCGGGGGCCTATTTTTGCTATCCGTCATCTTACTATCCATCTCTCTCATATCAATGGTCATATTTGCTTGCGGCAACTCCGGTGAGTCTCAAAAGA
AAAGAGGTGATGGCGTCGCCGTCAGCGCCGGCGAAAGTTGCGGCAGCGAAGGTTGTGGGTGCGATGTCTGTGGGTGCTTCTGA
Protein sequenceShow/hide protein sequence
MYQGSSKLGSEQKVIPVGAHKIIMPILGATGAGFGDVNLVSSGGLFLLSVILLSISLISMVIFACGNSGESQKKRGDGVAVSAGESCGSEGCGCDVCGCF