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Lsi10G015960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi10G015960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLoricrin-like
Genome locationchr10:20454511..20454744
RNA-Seq ExpressionLsi10G015960
SyntenyLsi10G015960
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273122.1 unnamed protein product [Prunus armeniaca]1.4e-0761.54Show/hide
Query:  ILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGG
        +LG G A    +   +SGG+FLL +IL+S+SLISMVIFACGD     KKRY GGGGG      GGGGCGGGG GGCGG
Subjt:  ILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGG

KAB2612618.1 loricrin-like [Pyrus ussuriensis x Pyrus communis]2.0e-0652.75Show/hide
Query:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR-------YNGGGGGCG---GGGCGGGGCGGCGG
        M R  +G GG   G V+++    +SGGL LL +IL+S+SL+SMVIFACGD  D +++R         GGGGGCG   GGGCG GG GGCGG
Subjt:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR-------YNGGGGGCG---GGGCGGGGCGGCGG

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1065Show/hide
Query:  MGRPILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGG-GGCGGGGCGG--GGCGGCGG
        MGR I  A G   GDV L SSGGL LL+ +LLS+SL+SM+IFACGDS    K++ NGGG GG GGGGCGG  GG GGCGG
Subjt:  MGRPILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGG-GGCGGGGCGG--GGCGGCGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1164.94Show/hide
Query:  MGRPILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGG
        MGRPI  A G   GDV L SSGGL LL+ IL+S+SL+SM+IFACGDS    K++ NGGG   GG GCGGGGCGG GG
Subjt:  MGRPILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1374.07Show/hide
Query:  MGRPILGA--GGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGG-GGGCGGGGCG-GGGCGGCGG
        MGRPIL A  GG  F DV LVSSGGLFLLS ILLSISL+SM+IFACG+S DP++K   GG GGG GGGG G GGGCGGCGG
Subjt:  MGRPILGA--GGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGG-GGGCGGGGCG-GGGCGGCGG

TrEMBL top hitse value%identityAlignment
A0A314XHT1 Uncharacterized protein3.6e-0661.43Show/hide
Query:  ILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRY-NGGGGGCGGGGCGGGGCG
        +LG G A    +   +SGG+ LL +IL+S+SLISMVIFACGD     KKRY  GGGGGCGGGG GGGG G
Subjt:  ILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRY-NGGGGGCGGGGCGGGGCG

A0A498JL81 Uncharacterized protein1.3e-0658.33Show/hide
Query:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR---YNGGGGGCGGGGCGGGGCGGCGG
        M R  +G GG   G+V ++    +SGGL LL +IL+S+SLISMVIFACGDS    + R   Y GG GGCGGGG GGGGCGG GG
Subjt:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR---YNGGGGGCGGGGCGGGGCGGCGG

A0A540MXA9 Uncharacterized protein1.6e-0658.54Show/hide
Query:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGC-GGGGCGGCGG
        M R  +G GG   G+V ++    +SGGL LL +IL+S+SLISMVIFACGDS    + R  GGG G GGGGC GGGG GGCGG
Subjt:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGC-GGGGCGGCGG

A0A5N5GBC1 Loricrin-like9.6e-0752.75Show/hide
Query:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR-------YNGGGGGCG---GGGCGGGGCGGCGG
        M R  +G GG   G V+++    +SGGL LL +IL+S+SL+SMVIFACGD  D +++R         GGGGGCG   GGGCG GG GGCGG
Subjt:  MGRPILGAGGASFGDVNLV----SSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR-------YNGGGGGCG---GGGCGGGGCGGCGG

A0A6J5WYX6 Uncharacterized protein6.7e-0861.54Show/hide
Query:  ILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGG
        +LG G A    +   +SGG+FLL +IL+S+SLISMVIFACGD     KKRY GGGGG      GGGGCGGGG GGCGG
Subjt:  ILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGCCAATTCTTGGTGCCGGCGGCGCTAGCTTCGGAGATGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCCATCTCTCTCAT
ATCAATGGTCATATTTGCTTGTGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGCGGCGGTGGCTGTGGTG
GCTGTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGCCAATTCTTGGTGCCGGCGGCGCTAGCTTCGGAGATGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCCATCTCTCTCAT
ATCAATGGTCATATTTGCTTGTGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGCGGCGGTGGCTGTGGTG
GCTGTGGAGGTTGA
Protein sequenceShow/hide protein sequence
MGRPILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGG