CuGenDBv2

Gene ID	Lsi11G000110
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	B-like cyclin
Genome location	chr11:87728..91419
RNA-Seq Expression	Lsi11G000110
Synteny	Lsi11G000110
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0051301 - cell division (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039361 - Cyclin

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022957558.1 cyclin-J18 isoform X1 [Cucurbita moschata]

4.1e-43

85.22

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLPL
        AAIL AS Y +T+P+
Subjt:  AAILNASNYSLTLPL

XP_022957561.1 cyclin-J18 isoform X2 [Cucurbita moschata]

4.3e-45

89.91

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA+LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAAAIL A
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA

Query:  SNYSLTLPL
        S Y +T+P+
Subjt:  SNYSLTLPL

XP_022957562.1 cyclin-J18 isoform X3 [Cucurbita moschata]

4.1e-43

85.22

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLPL
        AAIL AS Y +T+P+
Subjt:  AAILNASNYSLTLPL

XP_023525666.1 cyclin-J18 isoform X2 [Cucurbita pepo subsp. pepo]

4.3e-45

89.91

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA+LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAAAIL A
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA

Query:  SNYSLTLPL
        S Y +T+P+
Subjt:  SNYSLTLPL

XP_023525674.1 cyclin-J18 isoform X3 [Cucurbita pepo subsp. pepo]

4.1e-43

85.22

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLPL
        AAIL AS Y +T+P+
Subjt:  AAILNASNYSLTLPL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SSH3 B-like cyclin

3.7e-42

84.4

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA
        HTS PLSIKLLK+FGD MIKEQHFMTRD LDA+L FEIGTANITFIFLEELL  FK+VAKVGELVNWEACMDVMDLLYE+EETSVFY SPCSLAAAIL A
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA

Query:  SNYSLTLPL
        S Y +T+P+
Subjt:  SNYSLTLPL

A0A6J1DTP7 B-like cyclin

2.8e-42

83.48

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        H+S PLSIKLLKSFGDKMIKEQHFMTRD LDA      VL FEIGTA+ITFI+LEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLPL
        A+IL AS Y +T+P+
Subjt:  AAILNASNYSLTLPL

A0A6J1GZG4 B-like cyclin

2.0e-43

85.22

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLPL
        AAIL AS Y +T+P+
Subjt:  AAILNASNYSLTLPL

A0A6J1GZK0 B-like cyclin

2.1e-45

89.91

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA+LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLAAAIL A
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNA

Query:  SNYSLTLPL
        S Y +T+P+
Subjt:  SNYSLTLPL

A0A6J1H0W7 B-like cyclin

2.0e-43

85.22

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        HTS PLSIKLLKSFGDKMIKEQHFMTRDLLDA      +LKFEIGTANITF+FLEELLIQFK+VAKVGELVNWEACMDVMDLLYEKEETSV YSSPCSLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLPL
        AAIL AS Y +T+P+
Subjt:  AAILNASNYSLTLPL

SwissProt top hits

e value

%identity

Alignment

Q0DTM7 Cyclin-J18-like

9.8e-24

43.86

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        H  +PLS+K LK+ GD++I +QHF  RD  +A      V+++ IG+ NI F +LEELL+QF++++K+G+L+N + CM+++D+LYE E++S  ++SPC LA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLP
        A+ L  + Y++++P
Subjt:  AAILNASNYSLTLP

Q9C5X2 Cyclin-J18

5.3e-30

64.04

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        H +R LS+  LKSFGDK+I EQ FM RD LDA      VLKFEIGT NI +  LE+LLIQFK+VAKVGE +N+EACMD+MDLLYEKE+TS+ Y S  SLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLP
        A+IL  S+Y +T+P
Subjt:  AAILNASNYSLTLP

Arabidopsis top hits

e value

%identity

Alignment

AT2G01905.1 cyclin J18

3.8e-31

64.04

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Query:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA
        H +R LS+  LKSFGDK+I EQ FM RD LDA      VLKFEIGT NI +  LE+LLIQFK+VAKVGE +N+EACMD+MDLLYEKE+TS+ Y S  SLA
Subjt:  HTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDA------VLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLA

Query:  AAILNASNYSLTLP
        A+IL  S+Y +T+P
Subjt:  AAILNASNYSLTLP

Sequences

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CDS sequence

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ATGAATTTTCACACTTCTCGTCCTCTTTCTATAAAACTTCTGAAATCTTTTGGGGATAAGATGATTAAGGAACAACATTTTATGACACGGGATTTATTGGATGCAGTATT
GAAGTTCGAGATTGGTACTGCAAATATCACTTTTATATTTCTTGAGGAACTTCTTATTCAATTCAAGAAAGTAGCCAAAGTTGGGGAGCTTGTGAACTGGGAAGCGTGCA
TGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTGTTTTACAGTTCTCCTTGTTCTTTAGCTGCTGCCATCTTGAACGCTTCTAATTATTCATTAACTCTC
CCCCTCTCCCACATGTGTATAGGTTGCTTCATATCTCATCACTGTTCCAGTTCAAGAATGGGAATTTCCAGTTGTTCCCTGGGATTGGAGAATCTTAATAGCGAATCAGT
GATGACCAAATGTAATGGAGTATAG

mRNA sequence

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Protein sequence

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MNFHTSRPLSIKLLKSFGDKMIKEQHFMTRDLLDAVLKFEIGTANITFIFLEELLIQFKKVAKVGELVNWEACMDVMDLLYEKEETSVFYSSPCSLAAAILNASNYSLTL
PLSHMCIGCFISHHCSSSRMGISSCSLGLENLNSESVMTKCNGV

Lsi11G000110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome