; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G000540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G000540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome c
Genome locationchr11:625140..629319
RNA-Seq ExpressionLsi11G000540
SyntenyLsi11G000540
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0010336 - gibberellic acid homeostasis (biological process)
GO:0005758 - mitochondrial intermembrane space (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002327 - Cytochrome c, class IA/ IB
IPR009056 - Cytochrome c-like domain
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452381.1 PREDICTED: cytochrome c [Cucumis melo]1.2e-5798.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

XP_010542745.1 PREDICTED: cytochrome c [Tarenaya hassleriana]4.7e-5796.43Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSKAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAV+WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKE+TA
Subjt:  ADLIAYLKESTA

XP_021288081.1 cytochrome c [Herrania umbratica]1.6e-5798.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF EAPPGNSKAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

XP_022930036.1 cytochrome c [Cucurbita moschata]9.4e-5898.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

XP_038893188.1 cytochrome c [Benincasa hispida]4.2e-5899.11Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

TrEMBL top hitse value%identityAlignment
A0A1S3BUU3 cytochrome c6.0e-5898.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A5D3DTP9 Cytochrome c6.0e-5898.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A6J1AML9 cytochrome c7.8e-5898.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF EAPPGNSKAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A6J1EPS9 cytochrome c4.6e-5898.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

A0A6J1JWC5 cytochrome c4.6e-5898.21Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

SwissProt top hitse value%identityAlignment
A2Y4S9 Cytochrome c2.6e-5893.75Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGN KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYS ANKNMAVIWEE TLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLI+YLKE+T+
Subjt:  ADLIAYLKESTA

P00051 Cytochrome c6.8e-5996.4Show/hide
Query:  ASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERA
        ASF+EAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RA
Subjt:  ASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERA

Query:  DLIAYLKESTA
        DLIAYLKE+TA
Subjt:  DLIAYLKESTA

P00052 Cytochrome c3.4e-5895.5Show/hide
Query:  ASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERA
        ASF+EAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RA
Subjt:  ASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERA

Query:  DLIAYLKESTA
        DLIAYLKESTA
Subjt:  DLIAYLKESTA

P00054 Cytochrome c1.7e-5792.79Show/hide
Query:  ASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERA
        ASF++APPG+ K+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIW E TLYDYLLNPKKYIPGTKMVFPGLKKPQERA
Subjt:  ASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERA

Query:  DLIAYLKESTA
        DLIAYLKE+TA
Subjt:  DLIAYLKESTA

Q0DI31 Cytochrome c2.6e-5893.75Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGN KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYS ANKNMAVIWEE TLYDYLLNPKKYIPGTKMVFPGLKKPQER
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLI+YLKE+T+
Subjt:  ADLIAYLKESTA

Arabidopsis top hitse value%identityAlignment
AT1G22840.1 CYTOCHROME C-16.5e-5791.07Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKESTA
Subjt:  ADLIAYLKESTA

AT1G22840.2 CYTOCHROME C-12.1e-3986.9Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI
        MASF+EAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEK LYDYLLNPKK +
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI

AT4G10040.1 cytochrome c-21.6e-5892.86Show/hide
Query:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER
        MASF+EAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+R
Subjt:  MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQER

Query:  ADLIAYLKESTA
        ADLIAYLKE TA
Subjt:  ADLIAYLKESTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTTAACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGGGCTGGTCACAAGCA
AGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCTGCTGCTAACAAGAATATGGCTGTGATATGGGAAGAAAAGACGTTGT
ATGATTACTTGCTTAACCCCAAGAAGTATATTCCCGGAACAAAGATGGTTTTCCCTGGGCTGAAGAAACCGCAGGAACGTGCCGACCTTATTGCTTATCTGAAGGAATCA
ACTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GGTATATAAAAAAGCAAAATACAAAGAATAGCTTCTCCATCCTTCTACAAACACTGCGAACCCTAGCCCTCAGATCTGAACGCCACCTCATTCTTACGCCATGGCGAGCT
TTAACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGGGCTGGTCACAAGCAAGGTCCCAAT
TTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCTGCTGCTAACAAGAATATGGCTGTGATATGGGAAGAAAAGACGTTGTATGATTACTT
GCTTAACCCCAAGAAGTATATTCCCGGAACAAAGATGGTTTTCCCTGGGCTGAAGAAACCGCAGGAACGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAAA
TGAGACATATATGATGCATCTGCCCATCTAGAATTTTTTGAGACTTTTCCCCTCATTAAATAAGAACATTGAGGAAAATTAGATGAAAATTTGGAGGGAGTTGGTGCGAC
GAAGTAGGTGCGGGTGACCAAGAATAAAGTATTTAATGCATAAGCCAGGATCGCACCGAATGATGGCGAGGACTAGGGGTAGATGTGCATTGGGAGGATGGGAGGACCCC
AAGAATATTATGACCCAATTTCTCCTGTGTTCAACACTACAACCAAAGCATATGAGGAAGAATAGTTGGGTACACCAACCAATAGGTCGACTACAGTAGTAACAACGTTT
ACACATTATGTACGACATGAAGATGCAAACGACCAACTTGAGAGGATTACATCTTGGTCTCGATCAAAGTTTGTTGAGTCGAACAATGCATCACAGGCATTCTCTCAAAT
ATAAGAGTTATCGATCTAAGACAGGTCATGCTCATGGAAATCATATTCACCACTGTACATAAGACCAACAATTCTGTCCCAATGGAGTTCAAGATGAGTTGTTGCATGCC
CCTCTTGAGAAGAGATGAATAACCTTACCTTGTTACCACTATTTTTGTGAGAACAAGACTATTGTCAAAATGTCTTCAAATATTTATTTTCATTTTAATTAAAATTTATA
TTGAAAGAAATTTGTAAAATATACATAAAATAATAGAAACAAAAAGATCTCAATCTTATAATTTATGGAAACAATTTCTTAATAAAGAATAATTTAACAGTTGTA
Protein sequenceShow/hide protein sequence
MASFNEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKES
TA