CuGenDBv2

Gene ID	Lsi11G001030
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B
Genome location	chr11:1126593..1126817
RNA-Seq Expression	Lsi11G001030
Synteny	Lsi11G001030
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR012576 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460580.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo]

1.3e-34

98.65

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

XP_011655428.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis sativus]

1.4e-33

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

XP_022933083.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata]

2.4e-33

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

XP_022974255.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima]

1.1e-33

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

XP_038876540.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hispida]

2.2e-34

98.65

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS SHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR92 Uncharacterized protein

6.8e-34

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHH++ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

A0A1S3CD83 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

6.1e-35

98.65

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

A0A6J1F3P5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.2e-33

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

A0A6J1IDH2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

5.2e-34

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

A0A6J1KDK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.2e-33

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

SwissProt top hits

e value

%identity

Alignment

O64725 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A

8.3e-21

69.35

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH

Q9M9R9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

4.7e-24

67.61

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

Arabidopsis top hits

e value

%identity

Alignment

AT1G14450.1 NADH dehydrogenase (ubiquinone)s

3.3e-25

67.61

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

AT2G02510.1 NADH dehydrogenase (ubiquinone)s

5.9e-22

69.35

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH

Sequences

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CDS sequence

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ATGGCGAATAAGCCTTTGGGATCGACGGGTGAGTTCTTCAGGAGGAGAGACGAGTGGAGGAAGCATCCGATGCTCACCAATCAGTTCCGTCACGCCACTCCTGGCCTCGG
CATCGCCCTCGTCGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTCTACAACAGGATCAATTCTCCCTCTTCTTCTCACCACCACCATGCCGATGCATCATCCGCCACCC
ATTAA

mRNA sequence

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Protein sequence

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MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHADASSATH

Lsi11G001030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome