; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G001540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G001540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionG protein gamma domain-containing protein
Genome locationchr11:1689472..1692018
RNA-Seq ExpressionLsi11G001540
SyntenyLsi11G001540
Gene Ontology termsGO:0007186 - G protein-coupled receptor signaling pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR015898 - G-protein gamma-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061462.1 guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuwa]1.5e-7175.59Show/hide
Query:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTS-------------
        ATPTRPPSSSSSSSI   PPPYPKSPP+YPDLYGKRRQAAK+QML+REIGFLEEELKSTEGLQPASKCCKEVADYVIANSDP+IPT              
Subjt:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTS-------------

Query:  ---------IAADVNFGNGSVDSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAA
                 + A +N     VDSPVVSYPGF VAVMLD RSISKS PAATVIT VNAY  AAVNYRSG V GS    VGIVA+VQHYPNAHALVQPSHAA
Subjt:  ---------IAADVNFGNGSVDSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAA

Query:  NVVAIFHYLPAPA
        NVVAIFHYLPAPA
Subjt:  NVVAIFHYLPAPA

KAF3439696.1 hypothetical protein FNV43_RR17974 [Rhamnella rubrinervis]4.3e-3454.4Show/hide
Query:  SSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIAADVNFGNGSVDSPVVSYPGFVV
        SSS+PSLPPP PKSPPEYPDLYGKRR+ AKVQMLEREIGFLEEELKS   +QP+S+CCKE+ D+V AN DPLIPT IA  V  GNGSV+SP ++  GF V
Subjt:  SSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIAADVNFGNGSVDSPVVSYPGFVV

Query:  AVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVA--IFHYLPAPA
        AVML     + +  AA +  HV A+  + V ++SG  A              H  +  A V+  HAA +VA  +FH L A A
Subjt:  AVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVA--IFHYLPAPA

KAG7021355.1 hypothetical protein SDJN02_18044, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3865.56Show/hide
Query:  EEELKSTEGLQPASKCCKE-------------VADYVIANSDPLIPTSIAADVNFGNGS-VDSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHA
        +E+LKST+GLQPAS+CCKE             VADYV+A SDPLI TSIAADVNFGNGS VDSP VS  GF VA MLD RSISK+HPA  VI HVNAYHA
Subjt:  EEELKSTEGLQPASKCCKE-------------VADYVIANSDPLIPTSIAADVNFGNGS-VDSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHA

Query:  AAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVAIFHYLPA
        AAV Y+SGS           VA+VQHYP+AHAL Q  HAAN V IFHYL A
Subjt:  AAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVAIFHYLPA

KAG7030517.1 Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-7984.9Show/hide
Query:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIAADVNFGNGSV
        MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAK+QMLEREIGFLEEELKSTEGL PAS+CCKEVAD+VIANSDPLIPTSIAADVNFGNGSV
Subjt:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIAADVNFGNGSV

Query:  DSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVAIFHYLPAPA
        DSPVV+YPGF VAVMLD RSI KSHPAATVI HVNAY  AAVNY SGSVA  AG  VGIV++VQ YP+A A+VQPSHAANVVA+ HYLPAPA
Subjt:  DSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVAIFHYLPAPA

XP_038889974.1 guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida]1.7e-3596.55Show/hide
Query:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT
        M TPTRPP SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVA+YVIANSDPLIPT
Subjt:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT

TrEMBL top hitse value%identityAlignment
A0A0A0LIK7 G protein gamma domain-containing protein1.0e-3391.86Show/hide
Query:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT
        ATPTRPPSSSSSSS  S+PPPYPKSPP+YPDLYGKRRQAAK+QML+REIGFLEEELKSTEGLQPASKCCKEVADYVIANSDP+IPT
Subjt:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT

A0A1S3CB82 guanine nucleotide-binding protein subunit gamma 3-like1.8e-3391.86Show/hide
Query:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT
        ATPTRPPSSSSSSS  S+PPPYPKSPP+YPDLYGKRRQAAK+QML+REIGFLEEELKSTEGLQPASKCCKEVADYVIANSDP+IPT
Subjt:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT

A0A5A7UZX5 Guanine nucleotide-binding protein subunit gamma 3-like7.3e-7275.59Show/hide
Query:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTS-------------
        ATPTRPPSSSSSSSI   PPPYPKSPP+YPDLYGKRRQAAK+QML+REIGFLEEELKSTEGLQPASKCCKEVADYVIANSDP+IPT              
Subjt:  ATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTS-------------

Query:  ---------IAADVNFGNGSVDSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAA
                 + A +N     VDSPVVSYPGF VAVMLD RSISKS PAATVIT VNAY  AAVNYRSG V GS    VGIVA+VQHYPNAHALVQPSHAA
Subjt:  ---------IAADVNFGNGSVDSPVVSYPGFVVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAA

Query:  NVVAIFHYLPAPA
        NVVAIFHYLPAPA
Subjt:  NVVAIFHYLPAPA

A0A6J1KGS0 guanine nucleotide-binding protein subunit gamma 3-like isoform X12.3e-3390.8Show/hide
Query:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT
        MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGL PAS+CCKEVAD+VIANSDPLIPT
Subjt:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT

A0A6J1KJF9 guanine nucleotide-binding protein subunit gamma 3-like isoform X22.3e-3390.8Show/hide
Query:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT
        MATPTRP   +SSSSIPSLPPPYPKSPP+YPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGL PAS+CCKEVAD+VIANSDPLIPT
Subjt:  MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPT

SwissProt top hitse value%identityAlignment
Q6AWT8 Guanine nucleotide-binding protein subunit gamma 34.5e-2677.92Show/hide
Query:  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP
        SSSS +  SLPPP PKSPPEYPDLYGKRR+AA+VQMLEREIGFLE E+K  EG+QPAS+C KEV+D+V+ANSDPLIP
Subjt:  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP

Q93V47 Guanine nucleotide-binding protein subunit gamma 23.3e-0547.27Show/hide
Query:  DLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP
        D  GK R  A+++ LE+E  FLEEEL+  E +  AS  CKE  D V +  DPL+P
Subjt:  DLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP

Arabidopsis top hitse value%identityAlignment
AT3G22942.1 G-protein gamma subunit 22.4e-0647.27Show/hide
Query:  DLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP
        D  GK R  A+++ LE+E  FLEEEL+  E +  AS  CKE  D V +  DPL+P
Subjt:  DLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP

AT5G20635.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink).3.2e-2777.92Show/hide
Query:  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP
        SSSS +  SLPPP PKSPPEYPDLYGKRR+AA+VQMLEREIGFLE E+K  EG+QPAS+C KEV+D+V+ANSDPLIP
Subjt:  SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCCCACTCGCCCACCTTCCTCTTCTTCTTCTTCTTCAATTCCATCTCTCCCACCCCCTTACCCCAAGTCCCCTCCTGAGTATCCTGATTTGTATGGAAAGCG
CAGACAAGCCGCCAAGGTTCAGATGCTTGAGAGGGAGATTGGTTTTCTCGAGGAAGAATTGAAGTCTACCGAAGGTCTTCAACCTGCATCTAAATGCTGCAAAGAGGTAG
CTGACTATGTGATCGCCAACTCAGATCCCTTGATACCAACAAGCATCGCCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTGTTGTAAGTTATCCTGGATTT
GTTGTTGCTGTTATGCTGGATGTTCGATCCATCTCGAAATCCCACCCTGCTGCAACTGTAATAACCCATGTAAATGCCTATCATGCGGCAGCTGTAAATTACCGAAGTGG
CAGTGTTGCGGGGAGTGCGGGGTGTGTTGTGGGCATTGTTGCAGTTGTCCAACATTACCCCAATGCTCATGCCCTTGTCCAACCATCTCATGCAGCCAATGTTGTAGCCA
TTTTTCATTACCTTCCTGCTCCTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTCCCACTCGCCCACCTTCCTCTTCTTCTTCTTCTTCAATTCCATCTCTCCCACCCCCTTACCCCAAGTCCCCTCCTGAGTATCCTGATTTGTATGGAAAGCG
CAGACAAGCCGCCAAGGTTCAGATGCTTGAGAGGGAGATTGGTTTTCTCGAGGAAGAATTGAAGTCTACCGAAGGTCTTCAACCTGCATCTAAATGCTGCAAAGAGGTAG
CTGACTATGTGATCGCCAACTCAGATCCCTTGATACCAACAAGCATCGCCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTGTTGTAAGTTATCCTGGATTT
GTTGTTGCTGTTATGCTGGATGTTCGATCCATCTCGAAATCCCACCCTGCTGCAACTGTAATAACCCATGTAAATGCCTATCATGCGGCAGCTGTAAATTACCGAAGTGG
CAGTGTTGCGGGGAGTGCGGGGTGTGTTGTGGGCATTGTTGCAGTTGTCCAACATTACCCCAATGCTCATGCCCTTGTCCAACCATCTCATGCAGCCAATGTTGTAGCCA
TTTTTCATTACCTTCCTGCTCCTGCCTAGAATGCCCATGCTGTGAATGCAAATGCAAATGCAAATGTACATTAGGAAAATGTCCAAAAATACGACTTTGTTGCTGTTTTG
GTAGCAGAAGCTGTTGTGGGTGTACTGGAAACTGCTGCTGTAATCCATGCCAATTGTGTTGCTAGCCACAGACCACTGCTCACTCCCTTAGTTCTATCTGTATCTCTTTC
GGAACCTTCGAGCAGCTCGGTTATGGAATGTCAACTAGTCCCAAGATTGTAAAAATAAGGTACAGTGTTTTGCTGAGGAAGTCGGTGGCCGAGTCAAAACGATTCTTCCT
GTGGTGAGTTTAGCAACTGCAACTGTAACAGCAACAACAGTAAGGAGAATGGGGCATCCTAAACTCCTTGCCTGCACAAAATGGGAGAGGTCAGCTCAGGTCCATTAAGC
ATAGCAACCATAAAAGCGGCAGTTGGATATTGGAGAAGGAATGGGCGGTCCCATGCCACTGCTGTATCATAAATTATCAATTTTTTTTTTTTTTTTTACCAAACAGTATT
AGTTGATGTAGAGGCCTTTTTGGATGAGTAAAGTCAATAATATTCAGGACTTATATCCTTTTCACAAGCGTCATTATTTGCTAATGCAATTTGCTCC
Protein sequenceShow/hide protein sequence
MATPTRPPSSSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKCCKEVADYVIANSDPLIPTSIAADVNFGNGSVDSPVVSYPGF
VVAVMLDVRSISKSHPAATVITHVNAYHAAAVNYRSGSVAGSAGCVVGIVAVVQHYPNAHALVQPSHAANVVAIFHYLPAPA