; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G001610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G001610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMediator of RNA polymerase II transcription subunit 20
Genome locationchr11:1739220..1742943
RNA-Seq ExpressionLsi11G001610
SyntenyLsi11G001610
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0016592 - mediator complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR013921 - Mediator complex, subunit Med20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061469.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo var. makuwa]1.8e-11890.87Show/hide
Query:  LQIVPNLLRNRLTSVV-SLRLCTAGIMPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQP
        LQIVP LL +RLTSVV SLR  T G MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN PAAEFPRDFLGISLPEQP
Subjt:  LQIVPNLLRNRLTSVV-SLRLCTAGIMPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQP

Query:  NKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSS
        NKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSS
Subjt:  NKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSS

Query:  LPGRFMHIEPNFAEYGLSDYYTSQHTAVQYGN---EFIATI
        LPGRFMHIE NFAEYGLSD+YT QHTAVQYGN   + IAT+
Subjt:  LPGRFMHIEPNFAEYGLSDYYTSQHTAVQYGN---EFIATI

XP_004141069.1 mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus]1.9e-11295.35Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN PAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQYGN   + IAT+
Subjt:  AVQYGN---EFIATI

XP_008459711.1 PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo]6.3e-11193.49Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN PAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQYGN   + IAT+
Subjt:  AVQYGN---EFIATI

XP_022946745.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata]1.1e-11093.49Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQY N   + IAT+
Subjt:  AVQYGN---EFIATI

XP_038889134.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida]3.0e-11395.81Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSR+VMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQY N   + IAT+
Subjt:  AVQYGN---EFIATI

TrEMBL top hitse value%identityAlignment
A0A0A0LHQ1 Mediator of RNA polymerase II transcription subunit 209.4e-11395.35Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN PAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQYGN   + IAT+
Subjt:  AVQYGN---EFIATI

A0A1S3CAW6 Mediator of RNA polymerase II transcription subunit 203.0e-11193.49Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN PAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQYGN   + IAT+
Subjt:  AVQYGN---EFIATI

A0A5D3CH02 Mediator of RNA polymerase II transcription subunit 208.8e-11990.87Show/hide
Query:  LQIVPNLLRNRLTSVV-SLRLCTAGIMPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQP
        LQIVP LL +RLTSVV SLR  T G MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN PAAEFPRDFLGISLPEQP
Subjt:  LQIVPNLLRNRLTSVV-SLRLCTAGIMPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQP

Query:  NKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSS
        NKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSS
Subjt:  NKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSS

Query:  LPGRFMHIEPNFAEYGLSDYYTSQHTAVQYGN---EFIATI
        LPGRFMHIE NFAEYGLSD+YT QHTAVQYGN   + IAT+
Subjt:  LPGRFMHIEPNFAEYGLSDYYTSQHTAVQYGN---EFIATI

A0A6J1G4U3 Mediator of RNA polymerase II transcription subunit 205.2e-11193.49Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQY N   + IAT+
Subjt:  AVQYGN---EFIATI

A0A6J1KEU1 Mediator of RNA polymerase II transcription subunit 205.2e-11193.49Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A EFPRDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQAIMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSE+LRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGN---EFIATI
        AVQY N   + IAT+
Subjt:  AVQYGN---EFIATI

SwissProt top hitse value%identityAlignment
Q54FL3 Putative mediator of RNA polymerase II transcription subunit 205.5e-0928.79Show/hide
Query:  LNEVSQCVESIHGVKGGKWKATLTFYKPILRD-QNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLG
        L E+++ +E + G+K        + Y   + D  NL     PR+F  +   E+P K + + R    ++E D  + +I+EK  SYK R        +Y+LG
Subjt:  LNEVSQCVESIHGVKGGKWKATLTFYKPILRD-QNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLG

Query:  DFQLRVGKVVPNNSESLRGIVMEIEY----LPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY------YTSQHTAVQYGNEF
        DF +RVG +V      +RGI++E+EY     P++S     +++ EF          +   G F   EP    +  S Y      Y+  HT+ QY N F
Subjt:  DFQLRVGKVVPNNSESLRGIVMEIEY----LPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY------YTSQHTAVQYGNEF

Q6NPF4 Mediator of RNA polymerase II transcription subunit 20a8.0e-8573.53Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KWVLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+DQ     EFPRDFLGISL +QPNKYY IIR QRIVLEAD +IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +VAL F+GFQYQLGDF+LRVGKVVP +SE++RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF E+GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQY
        AV+Y
Subjt:  AVQY

Q9M0S0 Mediator of RNA polymerase II transcription subunit 20b5.6e-7863.59Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KW+LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+DQ    AEFPR+F+GISLPE+P+KYY +IR QRIV+EAD +IQ IME 
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +++  FEG +YQLGDF+LRVGKVVP ++E++RG+VME+EYLPISSM  ++++MEEF E+WQEAMSK SLPG+F++ E NF ++GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGNEFIATIVDGIR
        AV Y   F+A ++  I+
Subjt:  AVQYGNEFIATIVDGIR

Arabidopsis top hitse value%identityAlignment
AT2G28020.1 BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1)4.2e-1259.62Show/hide
Query:  MEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQ
        ME +R+VMEEF E+W EA++K SLPG+F++ + NF E+GL D YT QHTAV+
Subjt:  MEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQ

AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex5.7e-8673.53Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KWVLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+DQ     EFPRDFLGISL +QPNKYY IIR QRIVLEAD +IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +VAL F+GFQYQLGDF+LRVGKVVP +SE++RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF E+GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQY
        AV+Y
Subjt:  AVQY

AT4G09070.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex4.0e-7963.59Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK
        MP+KW+LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+DQ    AEFPR+F+GISLPE+P+KYY +IR QRIV+EAD +IQ IME 
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +++  FEG +YQLGDF+LRVGKVVP ++E++RG+VME+EYLPISSM  ++++MEEF E+WQEAMSK SLPG+F++ E NF ++GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYGNEFIATIVDGIR
        AV Y   F+A ++  I+
Subjt:  AVQYGNEFIATIVDGIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGGTCTTTATACTTTCCATTGGGCTTTCCGCAAAACTTGCAAATTGTTCCTAATCTGCTCCGGAACCGACTAACCTCCGTCGTCTCGCTGCGGCTTTGTACGGC
CGGAATTATGCCGCTAAAATGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACGGTTAACAGTCAGATACTCAACGAGGTTTCGCAATGTGTTGAGAGTATCCATGGCG
TTAAAGGGGGAAAATGGAAAGCTACTCTCACTTTCTACAAACCCATCTTACGAGATCAAAACTTACCAGCGGCCGAGTTCCCGCGGGATTTTCTCGGAATTTCGCTGCCG
GAGCAACCAAACAAGTATTACCTTATAATTCGTGGCCAACGGATCGTCTTGGAAGCTGATTTCACGATTCAGGCTATAATGGAGAAGCTGCAGTCTTACAAGTTGCGCGT
TGCTCTCAATTTCGAGGGGTTCCAGTATCAGTTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCCAACAATTCCGAGAGTTTGAGAGGAATAGTTATGGAGATTG
AGTATCTCCCAATTTCTTCAATGGAGAAATCAAGACAGGTAATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCATTACCAGGTCGTTTCATGCAC
ATAGAACCAAACTTTGCAGAATATGGACTGTCGGATTACTACACTTCTCAACACACAGCAGTTCAATATGGCAACGAATTTATAGCGACAATCGTTGATGGGATTAGAGA
CTCGCCGTTTGCGGCGGCGGAACCACCCGCCGCCTCCAACTCATTTGGCCCTGGGAAAATTGCAATGGAAGCGATTGAAAACCCCTTGGCTCTGGCCGGGGAAAAGTTCT
CGCCCACCGTCAGCTGGACATTGGGCCCTAATTTCTCCCTCAGTCCTGCAATGACCTCCAAGATCTCGCTCTTAATGTCCTCACCCAGATTCTCCTTGAGTTTGAGGAAG
GGCAGAGCCAGGAGGTGCGACGACGGGGCCTTTCAAAGCATCGGCGACCCAATCAACAGCCATGATGTCATCGCAGATGGGAAGAACAAATTGCTTGACCACGTTCATGT
GGGCGGGGTGGGCGGAGTAGATGGAGAGATCTTCCTTGGAGGGGTAGCGGCTGTGAAGGAGGTGAGTGAAGGTGAAGGAGGAGGAGCGGTTGCGGAGGATGGGGCCGGCG
GTGAGATGGAGGACTTGGTCGAGGGAGATGAGGCCATTGAGGCCGGTGAGTATGTCGTTTACCTTGGAGGAATCGAGGCCGTCTTTGACCTTAAAGAGGACGACGTGCTC
GATTGGTTGAGTGTGAGCGGCGGACATGTTGACGGAGAATGGTCGGAAAGAAAGAGAAGGGTTTGGGCGGCGGAGGCGGAGATGCCTGGAAGTGGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGGTCTTTATACTTTCCATTGGGCTTTCCGCAAAACTTGCAAATTGTTCCTAATCTGCTCCGGAACCGACTAACCTCCGTCGTCTCGCTGCGGCTTTGTACGGC
CGGAATTATGCCGCTAAAATGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACGGTTAACAGTCAGATACTCAACGAGGTTTCGCAATGTGTTGAGAGTATCCATGGCG
TTAAAGGGGGAAAATGGAAAGCTACTCTCACTTTCTACAAACCCATCTTACGAGATCAAAACTTACCAGCGGCCGAGTTCCCGCGGGATTTTCTCGGAATTTCGCTGCCG
GAGCAACCAAACAAGTATTACCTTATAATTCGTGGCCAACGGATCGTCTTGGAAGCTGATTTCACGATTCAGGCTATAATGGAGAAGCTGCAGTCTTACAAGTTGCGCGT
TGCTCTCAATTTCGAGGGGTTCCAGTATCAGTTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCCAACAATTCCGAGAGTTTGAGAGGAATAGTTATGGAGATTG
AGTATCTCCCAATTTCTTCAATGGAGAAATCAAGACAGGTAATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCATTACCAGGTCGTTTCATGCAC
ATAGAACCAAACTTTGCAGAATATGGACTGTCGGATTACTACACTTCTCAACACACAGCAGTTCAATATGGCAACGAATTTATAGCGACAATCGTTGATGGGATTAGAGA
CTCGCCGTTTGCGGCGGCGGAACCACCCGCCGCCTCCAACTCATTTGGCCCTGGGAAAATTGCAATGGAAGCGATTGAAAACCCCTTGGCTCTGGCCGGGGAAAAGTTCT
CGCCCACCGTCAGCTGGACATTGGGCCCTAATTTCTCCCTCAGTCCTGCAATGACCTCCAAGATCTCGCTCTTAATGTCCTCACCCAGATTCTCCTTGAGTTTGAGGAAG
GGCAGAGCCAGGAGGTGCGACGACGGGGCCTTTCAAAGCATCGGCGACCCAATCAACAGCCATGATGTCATCGCAGATGGGAAGAACAAATTGCTTGACCACGTTCATGT
GGGCGGGGTGGGCGGAGTAGATGGAGAGATCTTCCTTGGAGGGGTAGCGGCTGTGAAGGAGGTGAGTGAAGGTGAAGGAGGAGGAGCGGTTGCGGAGGATGGGGCCGGCG
GTGAGATGGAGGACTTGGTCGAGGGAGATGAGGCCATTGAGGCCGGTGAGTATGTCGTTTACCTTGGAGGAATCGAGGCCGTCTTTGACCTTAAAGAGGACGACGTGCTC
GATTGGTTGAGTGTGAGCGGCGGACATGTTGACGGAGAATGGTCGGAAAGAAAGAGAAGGGTTTGGGCGGCGGAGGCGGAGATGCCTGGAAGTGGAAGATAA
Protein sequenceShow/hide protein sequence
MMGSLYFPLGFPQNLQIVPNLLRNRLTSVVSLRLCTAGIMPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFPRDFLGISLP
EQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNNSESLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMH
IEPNFAEYGLSDYYTSQHTAVQYGNEFIATIVDGIRDSPFAAAEPPAASNSFGPGKIAMEAIENPLALAGEKFSPTVSWTLGPNFSLSPAMTSKISLLMSSPRFSLSLRK
GRARRCDDGAFQSIGDPINSHDVIADGKNKLLDHVHVGGVGGVDGEIFLGGVAAVKEVSEGEGGGAVAEDGAGGEMEDLVEGDEAIEAGEYVVYLGGIEAVFDLKEDDVL
DWLSVSGGHVDGEWSERKRRVWAAEAEMPGSGR