; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G001630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G001630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionElf4 domain-containing protein
Genome locationchr11:1748902..1749225
RNA-Seq ExpressionLsi11G001630
SyntenyLsi11G001630
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599530.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3684.85Show/hide
Query:  GREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAKPGHKRNRPPP
        GR+MDGKM +TFQ NFV+VQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SAAKPGHKRNRPPP
Subjt:  GREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAKPGHKRNRPPP

XP_016719642.1 protein ELF4-LIKE 3-like [Gossypium hirsutum]1.2e-3375.68Show/hide
Query:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---
        ME+ET   L  G E+D K+V+TFQ NFV+VQNILDQNRLLINEINQNHE+K+PDNLTRNVGLIRELNNNIRRVVDLYADLSTS+TKS+D S+SDGDS   
Subjt:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---

Query:  AAKPGHKRNRP
            G+KRNRP
Subjt:  AAKPGHKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]6.7e-3779.46Show/hide
Query:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        ME ETL       GR+MDGKM +TFQ NFV+VQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SA
Subjt:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

Query:  AKPGHKRNRPPP
        AKPGHKRNRPPP
Subjt:  AKPGHKRNRPPP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]1.1e-3679.46Show/hide
Query:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        ME ETL       GR+MDGKM  TFQ NFV+VQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SA
Subjt:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

Query:  AKPGHKRNRPPP
        AKPGHKRNRPPP
Subjt:  AKPGHKRNRPPP

XP_038890489.1 protein ELF4-LIKE 3-like [Benincasa hispida]1.2e-3881.42Show/hide
Query:  MEEETLWKG------REMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS
        ME ETL  G      REMDGKMV+TFQ NFV+V+NILDQNRLLINEINQNHESK+P NLTRNVGLIRELNNNIRRVVDLYADLSTSFTKS+D    DGDS
Subjt:  MEEETLWKG------REMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS

Query:  AAKPGHKRNRPPP
        A KPGHKRNRPPP
Subjt:  AAKPGHKRNRPPP

TrEMBL top hitse value%identityAlignment
A0A1U8LYM5 protein ELF4-LIKE 3-like5.7e-3475.68Show/hide
Query:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---
        ME+ET   L  G E+D K+V+TFQ NFV+VQNILDQNRLLINEINQNHE+K+PDNLTRNVGLIRELNNNIRRVVDLYADLSTS+TKS+D S+SDGDS   
Subjt:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---

Query:  AAKPGHKRNRP
            G+KRNRP
Subjt:  AAKPGHKRNRP

A0A6J1G4K6 protein ELF4-LIKE 3-like3.3e-3779.46Show/hide
Query:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        ME ETL       GR+MDGKM +TFQ NFV+VQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SA
Subjt:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

Query:  AKPGHKRNRPPP
        AKPGHKRNRPPP
Subjt:  AKPGHKRNRPPP

A0A6J1KJ14 protein ELF4-LIKE 3-like3.3e-3779.46Show/hide
Query:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        ME ETL       GR+MDGKM +TFQ NFV+VQNILDQNRLLINEINQNHESK+PDNL RNVGLIRELNNNIRRVVDLYA LS SFTKS++ S S+G+SA
Subjt:  MEEETL-----WKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

Query:  AKPGHKRNRPPP
        AKPGHKRNRPPP
Subjt:  AKPGHKRNRPPP

A0A7J9IFS5 Elf4 domain-containing protein5.7e-3475.68Show/hide
Query:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---
        ME+ET   L  G E+D K+V+TFQ NFV+VQNILDQNRLLINEINQNHE+K+PDNLTRNVGLIRELNNNIRRVVDLYADLSTS+TKS+D S+SDGDS   
Subjt:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---

Query:  AAKPGHKRNRP
            G+KRNRP
Subjt:  AAKPGHKRNRP

A0A7J9KKD2 Elf4 domain-containing protein5.7e-3475.68Show/hide
Query:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---
        ME+ET   L  G E+D K+V+TFQ NFV+VQNILDQNRLLINEINQNHE+K+PDNLTRNVGLIRELNNNIRRVVDLYADLSTS+TKS+D S+SDGDS   
Subjt:  MEEET---LWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS---

Query:  AAKPGHKRNRP
            G+KRNRP
Subjt:  AAKPGHKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 43.7e-1446.59Show/hide
Query:  DGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAKPGH
        D  M E    NF +VQ++LD+NR LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+TSF        S G    K GH
Subjt:  DGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAKPGH

O80877 Protein ELF4-LIKE 12.2e-1447.06Show/hide
Query:  DGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDP---SASDGDS
        D ++ +T  N F + Q  LDQNR LI  +N+NH S++PDN++RNVGLI E+N NI +V+++Y+DLS +F K  D    +  DGD+
Subjt:  DGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDP---SASDGDS

Q570U6 Protein ELF4-LIKE 44.2e-2673.81Show/hide
Query:  MDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        MDGK++++FQ +FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Subjt:  MDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

Q8S8F5 Protein ELF4-LIKE 35.4e-2963.3Show/hide
Query:  MEEETLWK----GREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAA
        ME +T+ +    G +MDGK+++TF+ +FV+VQNILD NRLLINEINQNHESK+PDNL RNVGLIRELNNN+RRV  LY DLS +F+KS++ S S+GDS+ 
Subjt:  MEEETLWK----GREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAA

Query:  KPGHKRNRP
          G++R RP
Subjt:  KPGHKRNRP

Q94BS8 Protein ELF4-LIKE 21.8e-2471.43Show/hide
Query:  EMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS
        +MDGK+++ FQ +FV+VQ+ILDQNRLLINEINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF +SVD S S+G+S
Subjt:  EMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 43.0e-2773.81Show/hide
Query:  MDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        MDGK++++FQ +FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Subjt:  MDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

AT1G17455.2 ELF4-like 43.0e-2773.81Show/hide
Query:  MDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA
        MDGK++++FQ +FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +SVD S S+G+S+
Subjt:  MDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSA

AT1G72630.1 ELF4-like 21.3e-2571.43Show/hide
Query:  EMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS
        +MDGK+++ FQ +FV+VQ+ILDQNRLLINEINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF +SVD S S+G+S
Subjt:  EMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDS

AT2G06255.1 ELF4-like 33.8e-3063.3Show/hide
Query:  MEEETLWK----GREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAA
        ME +T+ +    G +MDGK+++TF+ +FV+VQNILD NRLLINEINQNHESK+PDNL RNVGLIRELNNN+RRV  LY DLS +F+KS++ S S+GDS+ 
Subjt:  MEEETLWK----GREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAA

Query:  KPGHKRNRP
          G++R RP
Subjt:  KPGHKRNRP

AT2G29950.1 ELF4-like 11.6e-1547.06Show/hide
Query:  DGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDP---SASDGDS
        D ++ +T  N F + Q  LDQNR LI  +N+NH S++PDN++RNVGLI E+N NI +V+++Y+DLS +F K  D    +  DGD+
Subjt:  DGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDP---SASDGDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGAGACATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAATAATTTTGTTAAAGTTCAGAATATTTTAGACCAAAACAGATTGCT
GATAAATGAAATTAACCAAAATCACGAGTCGAAATTGCCGGATAATCTCACAAGAAACGTAGGTTTAATTCGCGAGCTTAACAACAATATCAGAAGAGTTGTTGATTTGT
ACGCCGATCTCTCCACTTCCTTCACCAAATCCGTCGACCCTTCCGCTTCCGATGGAGACTCCGCCGCCAAGCCCGGCCACAAGCGCAACCGTCCTCCGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGAGACATTGTGGAAAGGAAGGGAAATGGATGGGAAAATGGTTGAGACATTTCAGAATAATTTTGTTAAAGTTCAGAATATTTTAGACCAAAACAGATTGCT
GATAAATGAAATTAACCAAAATCACGAGTCGAAATTGCCGGATAATCTCACAAGAAACGTAGGTTTAATTCGCGAGCTTAACAACAATATCAGAAGAGTTGTTGATTTGT
ACGCCGATCTCTCCACTTCCTTCACCAAATCCGTCGACCCTTCCGCTTCCGATGGAGACTCCGCCGCCAAGCCCGGCCACAAGCGCAACCGTCCTCCGCCGTAG
Protein sequenceShow/hide protein sequence
MEEETLWKGREMDGKMVETFQNNFVKVQNILDQNRLLINEINQNHESKLPDNLTRNVGLIRELNNNIRRVVDLYADLSTSFTKSVDPSASDGDSAAKPGHKRNRPPP