CuGenDBv2

Gene ID	Lsi11G001870
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr11:1952735..1953247
RNA-Seq Expression	Lsi11G001870
Synteny	Lsi11G001870
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586479.1 hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sororia]

9.3e-65

80.59

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEE+ KRHDFVP E STQKRPRAAA  VED+ +DILAWISVE+ETVGELMMLLDDAEKSRPM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF
        ESDSS+MASVD+NGARIKLMEIDS T+EKWKLW       + E  +++S+G SWDEDDLARFIGDEEQIF
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

XP_008459356.1 PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo]

4.2e-65

81.4

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEES   H+FV  EAST+KR R AA   EDMDDDILAWIS+E+ETVGELMMLLDD EKSRP+EEKVKFI+DPYSSAVIFQSSSSYVTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI
        ESDSSMMASVD+NGARIK+MEIDSET+EKWK+WSED L  +EEEE  + V DG ISWDEDDLARF+GDEEQI
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI

XP_022965986.1 uncharacterized protein LOC111465706 [Cucurbita maxima]

1.9e-65

81.76

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEE+ KRHDFVP E STQKRPRAAA  VED+ +DILAWISVE+ETVGELMMLLDDAEKSRPM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF
        ESDSS+MASVD+NGARIKLMEIDS T+EKWKLW       + E A++VS+G SWDEDDLARFIGDEEQIF
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

XP_023538157.1 uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo]

2.4e-65

81.76

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEE+ KRHDFVP E STQKRPRAAA  VED+ +DILAWISVE+ETVGELMMLLDDAEKSRPM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF
        ESDSS+MASVD+NGARIKLMEIDS T+EKWKLW       + E A++VS+G SWDEDDLARFIGDEEQIF
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

XP_038890889.1 uncharacterized protein LOC120080324 [Benincasa hispida]

2.0e-75

88.82

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        M+ES KRH+FVPPEAST+KRPR A +E ED+DDDILAWISVE+ETVGELMMLLDD EKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF
        ESDSSMMASVD+NGARIKLMEIDSET+EKWKLWSEDRLKEEEE  +AV DG  WDEDDLARFIGDEEQIF
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CB71 uncharacterized protein LOC103498512

2.0e-65

81.4

Show/hide

Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEES   H+FV  EAST+KR R AA   EDMDDDILAWIS+E+ETVGELMMLLDD EKSRP+EEKVKFI+DPYSSAVIFQSSSSYVTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI
        ESDSSMMASVD+NGARIK+MEIDSET+EKWK+WSED L  +EEEE  + V DG ISWDEDDLARF+GDEEQI
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI

A0A5A7UZZ9 Uncharacterized protein

2.0e-65

81.4

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEES   H+FV  EAST+KR R AA   EDMDDDILAWIS+E+ETVGELMMLLDD EKSRP+EEKVKFI+DPYSSAVIFQSSSSYVTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI
        ESDSSMMASVD+NGARIK+MEIDSET+EKWK+WSED L  +EEEE  + V DG ISWDEDDLARF+GDEEQI
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI

A0A5D3CG58 Uncharacterized protein

7.7e-65

80.81

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEES   H+FV  EAST+KR R AA   EDMDDDILAWIS+E+ETVGELMMLLDD EKSRP+EEKVKFI+DPYSSAVIFQSSSSYVTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI
        ESDSSMMASVD+NGARIK+MEIDSET+EKWK+WSE+ L  +EEEE  + V DG ISWDEDDLARF+GDEEQI
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRL--KEEEEAAAAVSDG-ISWDEDDLARFIGDEEQI

A0A6J1FD19 uncharacterized protein LOC111444281

5.9e-65

80.59

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Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEE+ KRHDFVP E STQKRPRAAA  VED+ +DILAWISVE+ETVGELMMLLDDAEKSRPM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF
        ESDSS+MASVD+NGARIKLMEIDS T+EKWKLW       + E A+++S+G SWDEDDLARFIGDEE IF
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

A0A6J1HN50 uncharacterized protein LOC111465706

9.0e-66

81.76

Show/hide

Query:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS
        MEE+ KRHDFVP E STQKRPRAAA  VED+ +DILAWISVE+ETVGELMMLLDDAEKSRPM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFS
Subjt:  MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFS

Query:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF
        ESDSS+MASVD+NGARIKLMEIDS T+EKWKLW       + E A++VS+G SWDEDDLARFIGDEEQIF
Subjt:  ESDSSMMASVDLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G56880.1 unknown protein

2.5e-15

38.69

Show/hide

Query:  EDETVGELMMLLDDAEKSRPMEE------------KVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDLNGARIKLMEIDSETIEK
        ++ T  E+M L++ +  +    E            +V+FIDDPY+  V+ QSSS Y+TIN NEESCG SFS+SDSS+MASVD +G      E  +   EK
Subjt:  EDETVGELMMLLDDAEKSRPMEE------------KVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDLNGARIKLMEIDSETIEK

Query:  WKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDE
           WS + ++  E           W++D LARF+G++
Subjt:  WKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDE

Sequences

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CDS sequence

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ATGGAAGAATCGCTGAAGAGGCATGACTTTGTTCCGCCGGAGGCCTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGAAGAGGTGGAGGATATGGACGACGACATTCTGGC
TTGGATTTCAGTTGAAGATGAAACAGTAGGCGAACTCATGATGCTTCTTGACGACGCAGAGAAAAGCCGTCCGATGGAGGAGAAAGTGAAGTTCATCGATGATCCGTACT
CATCGGCGGTGATTTTTCAATCGTCGTCGTCTTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCATCTTTCTCCGAATCGGACTCGTCGATGATGGCGAGTGTC
GATTTGAACGGAGCAAGGATTAAACTGATGGAAATCGATTCTGAAACTATTGAGAAATGGAAGTTGTGGAGCGAGGATCGGTTGAAGGAGGAGGAGGAGGCGGCGGCAGC
CGTATCGGACGGAATCAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGATGAAGAACAGATATTCTGA

mRNA sequence

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Protein sequence

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MEESLKRHDFVPPEASTQKRPRAAAEEVEDMDDDILAWISVEDETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASV
DLNGARIKLMEIDSETIEKWKLWSEDRLKEEEEAAAAVSDGISWDEDDLARFIGDEEQIF

Lsi11G001870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome