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Lsi11G002010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L31
Genome locationchr11:2052917..2054596
RNA-Seq ExpressionLsi11G002010
SyntenyLsi11G002010
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4371415.1 hypothetical protein F8388_001943 [Cannabis sativa]5.3e-5586.23Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFL----------STFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR
        MVEKTKGRKEEVVSREYTINLHKRLHGW+V   F+          STFKKKAP AIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVPRRIRVRIAR
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFL----------STFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR

Query:  KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

RVW38234.1 60S ribosomal protein L31 [Vitis vinifera]1.2e-5489.47Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHG-----WYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDD
        MVEKTKGRKEEVV+REYTINLHKRLHG      YV F+  STFKKKAPKAIKEIRKFA+KAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDD
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHG-----WYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDD

Query:  EDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        EDAKEELYSLVTVAEIPAEGLKGL TK+IEEDD
Subjt:  EDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

XP_008450816.1 PREDICTED: 60S ribosomal protein L31 [Cucumis melo]5.8e-5491.41Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPAEGLKGLGTKVI+E+D
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

XP_008459190.1 PREDICTED: 60S ribosomal protein L31 [Cucumis melo]9.0e-5592.97Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

XP_022154770.1 60S ribosomal protein L31 [Momordica charantia]4.4e-5491.41Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVV+REYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTV+EIPAEGLKGLGTKVIEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

TrEMBL top hitse value%identityAlignment
A0A1S3C9P7 60S ribosomal protein L314.3e-5592.97Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A5D3CKL3 60S ribosomal protein L314.3e-5592.97Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A6J1G2V4 60S ribosomal protein L314.3e-5592.97Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A6J1KK05 60S ribosomal protein L314.3e-5592.97Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

A0A7J6FLA9 Uncharacterized protein2.5e-5586.23Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFL----------STFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR
        MVEKTKGRKEEVVSREYTINLHKRLHGW+V   F+          STFKKKAP AIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVPRRIRVRIAR
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFL----------STFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR

Query:  KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
        KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Subjt:  KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

SwissProt top hitse value%identityAlignment
P46290 60S ribosomal protein L314.3e-5283.59Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        M +KTKGRKEEVV+REYTINLHKRLH          TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVAEIPA+GLKGLGTK+IE++D
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

P51420 60S ribosomal protein L31-31.3e-4879.53Show/hide
Query:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE
        + + KGRKEEV++REYTINLH+RLH          TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE
Subjt:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE

Query:  LYSLVTVAEIPAEGLKGLGTKVIEEDD
         +SLVTVAEIPAEGL GLGTKVIEE+D
Subjt:  LYSLVTVAEIPAEGLKGLGTKVIEEDD

Q9M573 60S ribosomal protein L315.3e-5084.68Show/hide
Query:  TKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYS
        +K RKEEVVSREYTINLHKRLHG         TFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYS
Subjt:  TKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYS

Query:  LVTVAEIPAEGLKGLGTKVIEEDD
        LVTVAEIP  GLKGLGT+VI+E++
Subjt:  LVTVAEIPAEGLKGLGTKVIEEDD

Q9MAV7 60S ribosomal protein L317.4e-5284.38Show/hide
Query:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE
        MVEKTKGRKEEVV+REYTINLHKRLHG         TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKE
Subjt:  MVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKE

Query:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD
        ELYSLVTVA+IPA  LKGLG ++IEEDD
Subjt:  ELYSLVTVAEIPAEGLKGLGTKVIEEDD

Q9STR1 60S ribosomal protein L31-22.2e-4878.74Show/hide
Query:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE
        + + KGRKEEVV+REYTINLH+RLH          TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE
Subjt:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE

Query:  LYSLVTVAEIPAEGLKGLGTKVIEEDD
         +SLVTVAEIPAEGL GLGTK+IEE+D
Subjt:  LYSLVTVAEIPAEGLKGLGTKVIEEDD

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein3.5e-4979.53Show/hide
Query:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE
        +EK KGRKEEVV+REYTINLH+RLH          TFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE
Subjt:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE

Query:  LYSLVTVAEIPAEGLKGLGTKVIEEDD
         +SLVTVAEIPAEGL GLGTKVIEE++
Subjt:  LYSLVTVAEIPAEGLKGLGTKVIEEDD

AT4G26230.1 Ribosomal protein L31e family protein1.6e-4978.74Show/hide
Query:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE
        + + KGRKEEVV+REYTINLH+RLH          TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE
Subjt:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE

Query:  LYSLVTVAEIPAEGLKGLGTKVIEEDD
         +SLVTVAEIPAEGL GLGTK+IEE+D
Subjt:  LYSLVTVAEIPAEGLKGLGTKVIEEDD

AT5G56710.1 Ribosomal protein L31e family protein9.2e-5079.53Show/hide
Query:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE
        + + KGRKEEV++REYTINLH+RLH          TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE
Subjt:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE

Query:  LYSLVTVAEIPAEGLKGLGTKVIEEDD
         +SLVTVAEIPAEGL GLGTKVIEE+D
Subjt:  LYSLVTVAEIPAEGLKGLGTKVIEEDD

AT5G56710.2 Ribosomal protein L31e family protein2.2e-2756.69Show/hide
Query:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE
        + + KGRKEEV++REYTINLH+RLH          TFKKKAPKAIKEIRKFAEKAMGTKDVRVD                                  EE
Subjt:  VEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEE

Query:  LYSLVTVAEIPAEGLKGLGTKVIEEDD
         +SLVTVAEIPAEGL GLGTKVIEE+D
Subjt:  LYSLVTVAEIPAEGLKGLGTKVIEEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAGATTCAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTAGTTAGCAGAGAGTATACTATTAACCTTCACAAACGCCTGCATGGCTGGTATGTTCA
TTTTATCTTCCTCTCCACCTTTAAGAAGAAGGCTCCCAAGGCCATTAAAGAAATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGT
TGAACAAGCACATATGGAGCAGGGGAATCAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAATGATGATGAAGATGCCAAGGAAGAGTTGTACTCC
CTCGTAACAGTTGCAGAAATCCCGGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAGATTCAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTAGTTAGCAGAGAGTATACTATTAACCTTCACAAACGCCTGCATGGCTGGTATGTTCA
TTTTATCTTCCTCTCCACCTTTAAGAAGAAGGCTCCCAAGGCCATTAAAGAAATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGT
TGAACAAGCACATATGGAGCAGGGGAATCAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAATGATGATGAAGATGCCAAGGAAGAGTTGTACTCC
CTCGTAACAGTTGCAGAAATCCCGGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGA
Protein sequenceShow/hide protein sequence
MVEDSKMVEKTKGRKEEVVSREYTINLHKRLHGWYVHFIFLSTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYS
LVTVAEIPAEGLKGLGTKVIEEDD