; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G002190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSuppressor protein SRP40-like
Genome locationchr11:2231977..2232904
RNA-Seq ExpressionLsi11G002190
SyntenyLsi11G002190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061522.1 suppressor protein SRP40-like [Cucumis melo var. makuwa]1.1e-4770.92Show/hide
Query:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL
        MEGKE+ +E FEAM+LREL+WVIME+RE+EV EA STSTIDSS   S+NSIESS+ ELLEDA SSSSLTSN  SSLSL     SS +GPLYELSELMANL
Subjt:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL

Query:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNIS-----QRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF
        PIKRGLSKFYNGKSQSFTSL S KSLEDLAKRVN N +     QRKKMK CKSYG   DAQKSS   SPKPLIAKK+            KRNNR F
Subjt:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNIS-----QRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF

XP_004141029.1 uncharacterized protein LOC101219805 [Cucumis sativus]3.4e-4667.53Show/hide
Query:  MEGKEK-MEAFEAM-KLRELSWVIMEARENEVF-EASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLS-SSEGPLYELSELMANLPIK
        MEGKEK +E FEAM + R+L+WVIME RE+EV  EAS++STIDSS   S+NSIESS+ ELLEDASSSS  +++ SSLSLS S +GPLYELSELMANLPIK
Subjt:  MEGKEK-MEAFEAM-KLRELSWVIMEARENEVF-EASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLS-SSEGPLYELSELMANLPIK

Query:  RGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN---ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFFDSH
        RGLSKFYNGKSQSFTSL S KSLEDLAKR+N+N    SQRKK+K CKSYG   ++QKSS  +SPKPLIAKK+            KR+NR FD+H
Subjt:  RGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN---ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFFDSH

XP_008458957.1 PREDICTED: uncharacterized protein LOC103498213 [Cucumis melo]1.1e-4770.92Show/hide
Query:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL
        MEGKE+ +E FEAM+LREL+WVIME+RE+EV EA STSTIDSS   S+NS+ESS+ ELLEDA SSSSLTSN  SSLSL     SS +GPLYELSELMANL
Subjt:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL

Query:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN-----ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF
        PIKRGLSKFYNGKSQSFTSL S KSLEDLAKRVN N      SQRKKMK CKSYG   DAQKSS   SPKPLIAKK+            KRNNR F
Subjt:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN-----ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF

XP_022154740.1 uncharacterized protein LOC111021921 [Momordica charantia]2.0e-5477.65Show/hide
Query:  GKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLS-LSSSEGPLYELSELMANLPIKRGLSK
        GKEK+EAFEAM+LRELSWVIM++ E+EV EA S ST+DSSSENSI+SIES S EL EDASSSS+   +LSS S LSSS GPLYELSELMANLPIKRGLSK
Subjt:  GKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLS-LSSSEGPLYELSELMANLPIKRGLSK

Query:  FYNGKSQSFTSLGSAKSLEDLAKRVNNN--ISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKK----ICKRNNRFFDSH
        FYNGKSQSFTSL SAKSLEDLAKRVNNN  I QRKKMK CKSYG G DAQ+ S+SPK  IAKK    +CKRNNR FDSH
Subjt:  FYNGKSQSFTSLGSAKSLEDLAKRVNNN--ISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKK----ICKRNNRFFDSH

XP_038890684.1 uncharacterized protein LOC120080185 [Benincasa hispida]4.3e-5778.49Show/hide
Query:  MEGKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSL----SLSSSEGPLYELSELMANLPIK
        M GKEKMEAFEAM+L EL+WVIME RE+EVFEA STSTI SSSENSINSIES S ELLEDA SSSS  SNLSSL    SLSSS+GPLYELSELMANLPIK
Subjt:  MEGKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSL----SLSSSEGPLYELSELMANLPIK

Query:  RGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKK---------ICKRNN-RFFD
        RGLSKFYNGKSQSFTSL S KSLEDLAKRVNNNISQRKKMK CKSYG G DAQK  +SPKPLI+K+         I KRNN R FD
Subjt:  RGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKK---------ICKRNN-RFFD

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ7 Uncharacterized protein1.7e-4667.53Show/hide
Query:  MEGKEK-MEAFEAM-KLRELSWVIMEARENEVF-EASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLS-SSEGPLYELSELMANLPIK
        MEGKEK +E FEAM + R+L+WVIME RE+EV  EAS++STIDSS   S+NSIESS+ ELLEDASSSS  +++ SSLSLS S +GPLYELSELMANLPIK
Subjt:  MEGKEK-MEAFEAM-KLRELSWVIMEARENEVF-EASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLS-SSEGPLYELSELMANLPIK

Query:  RGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN---ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFFDSH
        RGLSKFYNGKSQSFTSL S KSLEDLAKR+N+N    SQRKK+K CKSYG   ++QKSS  +SPKPLIAKK+            KR+NR FD+H
Subjt:  RGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN---ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFFDSH

A0A1S3C929 uncharacterized protein LOC1034982135.1e-4870.92Show/hide
Query:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL
        MEGKE+ +E FEAM+LREL+WVIME+RE+EV EA STSTIDSS   S+NS+ESS+ ELLEDA SSSSLTSN  SSLSL     SS +GPLYELSELMANL
Subjt:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL

Query:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN-----ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF
        PIKRGLSKFYNGKSQSFTSL S KSLEDLAKRVN N      SQRKKMK CKSYG   DAQKSS   SPKPLIAKK+            KRNNR F
Subjt:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN-----ISQRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF

A0A5A7V023 Suppressor protein SRP40-like5.1e-4870.92Show/hide
Query:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL
        MEGKE+ +E FEAM+LREL+WVIME+RE+EV EA STSTIDSS   S+NSIESS+ ELLEDA SSSSLTSN  SSLSL     SS +GPLYELSELMANL
Subjt:  MEGKEK-MEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNL-SSLSL-----SSSEGPLYELSELMANL

Query:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNIS-----QRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF
        PIKRGLSKFYNGKSQSFTSL S KSLEDLAKRVN N +     QRKKMK CKSYG   DAQKSS   SPKPLIAKK+            KRNNR F
Subjt:  PIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNIS-----QRKKMKPCKSYGEGFDAQKSS--FSPKPLIAKKI-----------CKRNNRFF

A0A6J1DKH4 uncharacterized protein LOC1110219219.7e-5577.65Show/hide
Query:  GKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLS-LSSSEGPLYELSELMANLPIKRGLSK
        GKEK+EAFEAM+LRELSWVIM++ E+EV EA S ST+DSSSENSI+SIES S EL EDASSSS+   +LSS S LSSS GPLYELSELMANLPIKRGLSK
Subjt:  GKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLS-LSSSEGPLYELSELMANLPIKRGLSK

Query:  FYNGKSQSFTSLGSAKSLEDLAKRVNNN--ISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKK----ICKRNNRFFDSH
        FYNGKSQSFTSL SAKSLEDLAKRVNNN  I QRKKMK CKSYG G DAQ+ S+SPK  IAKK    +CKRNNR FDSH
Subjt:  FYNGKSQSFTSLGSAKSLEDLAKRVNNN--ISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKK----ICKRNNRFFDSH

A0A6J1HQ75 uncharacterized protein LOC1114656793.7e-4668.72Show/hide
Query:  MEGKEKMEAF---EAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLSSSEGPLYELSELMANLPIKR
        M GK+ +EAF   EA++L+ELS V++E RE++V EAS       S+ENSI+S ES S ELLEDASS+S+ + +LSSLS S S GPLYELSELMANLPIKR
Subjt:  MEGKEKMEAF---EAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLSSSEGPLYELSELMANLPIKR

Query:  GLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN--ISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKKICKRNNRFFDSH
        GLSKFYNGKSQSFTS+ SAKSLEDLAK+VNNN   SQRKKMK CKSYG G DAQ+ S+SPKPLIAKK  KR +R F SH
Subjt:  GLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNN--ISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKKICKRNNRFFDSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G43850.1 unknown protein5.3e-0537.62Show/hide
Query:  SSSEGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLGSAKSL--EDLAKRVNNNISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKKICKRNNRFFDSH
        SS  GPL  +  L   LPIKR +SKFY GKS+SF SL    SL  +DL K  N    +R+ +   +    G        S KP   K +   + R  DS 
Subjt:  SSSEGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLGSAKSL--EDLAKRVNNNISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKKICKRNNRFFDSH

Query:  S
        S
Subjt:  S

AT4G26288.1 FUNCTIONS IN: molecular_function unknown1.9e-1046.15Show/hide
Query:  MKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLSSSEGPLYELSELMANLPI----KRGLSKFYNGKSQ
        M +R+ + +     E  V   S +S   SSS    +SI   S +L EDASSSSS +S       SSS GP  +LS+L++ LPI    K GLSK+Y GKSQ
Subjt:  MKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLSSSEGPLYELSELMANLPI----KRGLSKFYNGKSQ

Query:  SFTSLGSAKSLEDLAKR
        SFTSL +  SL+DL KR
Subjt:  SFTSLGSAKSLEDLAKR

AT5G56550.1 oxidative stress 33.2e-1853.91Show/hide
Query:  EDASSSSSLTSNLSS----------LSLSSSEGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNISQRKKMKPCKSYGEGFD-
        ED SSS SL+S++ S          +S SSS GPL +LS+LM++LPIKRGLSKFY GKSQSFTSLG+ KSLEDL KR   + +   K K  +S G   D 
Subjt:  EDASSSSSLTSNLSS----------LSLSSSEGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLGSAKSLEDLAKRVNNNISQRKKMKPCKSYGEGFD-

Query:  AQKSSFSPKPLIAKK
        + K  FSPK  I+KK
Subjt:  AQKSSFSPKPLIAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGAAAGAAAAGATGGAAGCTTTTGAAGCTATGAAGTTGAGGGAACTCAGTTGGGTGATCATGGAAGCTAGAGAAAATGAAGTTTTTGAAGCTTCTTCTACTTC
CACCATTGATTCTTCTTCAGAGAACTCCATCAATTCAATTGAATCTTCTTCATTAGAATTGTTAGAAGATGCATCGTCGTCGTCTTCTTTAACGTCGAACCTTTCTTCAT
TGTCGTTGTCCTCGTCGGAAGGACCTCTCTATGAACTCTCAGAGCTCATGGCCAATCTCCCCATCAAGAGAGGGTTATCAAAGTTCTACAATGGAAAATCACAATCTTTT
ACATCTCTAGGAAGTGCAAAAAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTTCTCAAAGGAAAAAAATGAAGCCTTGTAAGAGCTATGGAGAAGGTTTTGA
TGCTCAAAAATCTTCTTTTTCTCCAAAGCCTTTGATTGCTAAAAAAATTTGTAAGAGAAATAATAGGTTCTTTGATAGCCATTCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAACATTTTTTGGTCAATACCCCTACATTTATTGCTTCTATTTTTAAGCTCCTTCCCTCATTCATTTTCTTCTTCATAAATTCTACCAAACTTTCTTCAAATTTTA
TTTTTCTTGGACATAGACATGGAAGGGAAAGAAAAGATGGAAGCTTTTGAAGCTATGAAGTTGAGGGAACTCAGTTGGGTGATCATGGAAGCTAGAGAAAATGAAGTTTT
TGAAGCTTCTTCTACTTCCACCATTGATTCTTCTTCAGAGAACTCCATCAATTCAATTGAATCTTCTTCATTAGAATTGTTAGAAGATGCATCGTCGTCGTCTTCTTTAA
CGTCGAACCTTTCTTCATTGTCGTTGTCCTCGTCGGAAGGACCTCTCTATGAACTCTCAGAGCTCATGGCCAATCTCCCCATCAAGAGAGGGTTATCAAAGTTCTACAAT
GGAAAATCACAATCTTTTACATCTCTAGGAAGTGCAAAAAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTTCTCAAAGGAAAAAAATGAAGCCTTGTAAGAG
CTATGGAGAAGGTTTTGATGCTCAAAAATCTTCTTTTTCTCCAAAGCCTTTGATTGCTAAAAAAATTTGTAAGAGAAATAATAGGTTCTTTGATAGCCATTCTTGAGATG
TTCTTCCACTCATATTTAGAGGAATAGGCTAATTCTCTCTTCTTCTCTCTTCTTCTTCTTTTTTTTTTTTCCCCTTTTTTTTCCTCTCTTTTTTTTCATTTTCCTCAGTG
ATTTGAAGGCAAAAGTGGTTGGATTTTTGGTGGAAGAGTGTATTTGAAATAATGGTTCAATAG
Protein sequenceShow/hide protein sequence
MEGKEKMEAFEAMKLRELSWVIMEARENEVFEASSTSTIDSSSENSINSIESSSLELLEDASSSSSLTSNLSSLSLSSSEGPLYELSELMANLPIKRGLSKFYNGKSQSF
TSLGSAKSLEDLAKRVNNNISQRKKMKPCKSYGEGFDAQKSSFSPKPLIAKKICKRNNRFFDSHS