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Lsi11G002250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:2282445..2284100
RNA-Seq ExpressionLsi11G002250
SyntenyLsi11G002250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021306.1 hypothetical protein SDJN02_17995, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-5588.71Show/hide
Query:  GGASKLSKMVVSLPPLDTSDSFFLPPPNQPPNHEPVPESEEDDEEEEILANSACGRDRGGARPGNWPVGYPGTPPIPAGSSITTGIFCCWLRTLLSIIPA
        GGASKLSK+VVSLPPLDT+DSFFLPPPNQPPNHE +PESEED  EEE L NSACGRDRGGARPGNWPVGYPGT  IPAGSS+TTGIFCCWLRTLLSIIPA
Subjt:  GGASKLSKMVVSLPPLDTSDSFFLPPPNQPPNHEPVPESEEDDEEEEILANSACGRDRGGARPGNWPVGYPGTPPIPAGSSITTGIFCCWLRTLLSIIPA

Query:  PSIKANKTPPNKAERAADAGPCRI
        PSI ANKTPP  AERAADAGPCRI
Subjt:  PSIKANKTPPNKAERAADAGPCRI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCTTATCTCGAGCCTTAAAACCCAAATAAAAATATTTTATTTGTACTCAAAATTTGGCACAGGCGGTGCATCGAAGCTCTCCAAAATGGTTGTCTCGCTTCC
TCCACTCGACACTTCAGATTCCTTCTTCTTGCCTCCCCCAAACCAACCTCCGAACCACGAGCCAGTACCAGAATCTGAAGAAGACGACGAAGAAGAAGAGATACTTGCCA
ATTCAGCTTGTGGTAGAGACAGGGGAGGAGCACGGCCAGGTAATTGGCCTGTAGGATACCCAGGCACACCACCCATACCAGCAGGCTCCTCAATCACAACAGGCATATTC
TGTTGCTGGCTAAGAACTTTGTTGAGCATAATCCCAGCTCCTTCAATCAAAGCCAACAAAACGCCGCCAAACAAAGCCGAACGAGCTGCCGATGCAGGTCCCTGCCGCAT
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCTTATCTCGAGCCTTAAAACCCAAATAAAAATATTTTATTTGTACTCAAAATTTGGCACAGGCGGTGCATCGAAGCTCTCCAAAATGGTTGTCTCGCTTCC
TCCACTCGACACTTCAGATTCCTTCTTCTTGCCTCCCCCAAACCAACCTCCGAACCACGAGCCAGTACCAGAATCTGAAGAAGACGACGAAGAAGAAGAGATACTTGCCA
ATTCAGCTTGTGGTAGAGACAGGGGAGGAGCACGGCCAGGTAATTGGCCTGTAGGATACCCAGGCACACCACCCATACCAGCAGGCTCCTCAATCACAACAGGCATATTC
TGTTGCTGGCTAAGAACTTTGTTGAGCATAATCCCAGCTCCTTCAATCAAAGCCAACAAAACGCCGCCAAACAAAGCCGAACGAGCTGCCGATGCAGGTCCCTGCCGCAT
CTGA
Protein sequenceShow/hide protein sequence
MEKLISSLKTQIKIFYLYSKFGTGGASKLSKMVVSLPPLDTSDSFFLPPPNQPPNHEPVPESEEDDEEEEILANSACGRDRGGARPGNWPVGYPGTPPIPAGSSITTGIF
CCWLRTLLSIIPAPSIKANKTPPNKAERAADAGPCRI