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Lsi11G002510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:2558210..2561715
RNA-Seq ExpressionLsi11G002510
SyntenyLsi11G002510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A7C9DMN8 Uncharacterized protein3.0e-1745.83Show/hide
Query:  MTSIKTTQNLDHPPLQLPDRKPPPRFYPARSSLLRLRYNGGQIRSHKLENKHGILILAPKVLVQNDDIRRTLKDLKRLDFAERRLIIVDLLQGDDDAIGE
        MT I   QNLD P    P+R P         + L L  +  QIR   L++KH ILI  PKVLVQNDD+   L+ L+ LDFA+  L++VD  +G+ +A+G 
Subjt:  MTSIKTTQNLDHPPLQLPDRKPPPRFYPARSSLLRLRYNGGQIRSHKLENKHGILILAPKVLVQNDDIRRTLKDLKRLDFAERRLIIVDLLQGDDDAIGE

Query:  PPRTVDIGISAGSDPLEDLV
        P  +VD+GISAG+D L D+V
Subjt:  PPRTVDIGISAGSDPLEDLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGACATCCTTTAAGAAGGACGTTGGGATGACTATTCCGACATCCGAGTTCTCCAAGCTTTTGGAATACCTGAATCCCCATAGTTCAATCAAACTGAATGGAGT
AACCAGTGGCACTGGTGGTAACATTCATGGGGCCGAGTTCATCCATATCAGAATCCGACTCATCGTAGTCGTACCATCCTGCAGGAGAATCCTCATCCTGTCCAGTTTTG
GTCGAAGGAACATGAAGCTCAGACAAAGGAACGGGAAGTGGCTCCTCAGAGAACAGTTCGGAAGACATGCTTCTAGACCGATCGGCTTTTCTATTGTGTTGAATGATATA
ATTTCAAAATCAGGAAGTTCGGAACAACCCGGCCATGATTCTTCAGTCAAGTTGCCTAGAGTATTCTGTTACCTTCTTGAACCGAGCTTTCTGTTCCTGGAACAATTGCA
GACGGCCGAGAAGCAGCTAGAACTTGGGATAAAGAAAATCATAAGCCTTCAACATGAACAGATGAATACTACATTTAATCAAAATTTCAGAAACATCCAACCTGCAACTA
ATGAGTTGAATGGACCGTTCACAGTGGTTCCTCACATAATCGAGCTAAATTTGAGGAACGGAGTGTGTAAAGAATCTCCACATTCGATTTTATTCCCCCTCAAATTCGAC
TTCTCGTCATCTAAACAGGCTTATGTAATATGCACGACTGTAATTGAATACGAAAGCTCTTTTCTCGCAGATCTTAGACTAAAAAGAAGATTAAAAGAGAATTACCTGTC
CAAAATCGGCAAGCTTGAGCACGCCATCATCGGAGATCAACAAATTGCTAGGTTTCAAATCCCTATGCACGATCATATTCCTATGACAAGCATCAAGACCACTCAAAATC
TGGATCATCCACCGCTTCAACTCCCCGACCGCAAGCCCCCGCCCAGATTCTACCCCGCCCGATCCTCGCTTCTTCGCCTCCGCTATAACGGTGGCCAAATCCGTTCTCAT
AAACTCGAGAACAAGCACGGCATCCTCATCCTCGCGCCAAAAGTACTCGTGCAGAACGACGACATTAGGCGAACCTTGAAGGATTTGAAGCGCCTCGATTTCGCGGAACG
CCGACTGATAATCGTGGATCTCCTTCAAGGCGACGATGACGCCATCGGAGAGCCGCCGCGCACGGTGGACATCGGAATAAGCGCCGGATCCGACCCGCTCGAGGATCTCG
TACTTCTGGATGATATCCGGCCGAGTGTGGATGCTCCAGCTCTTAGCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGACATCCTTTAAGAAGGACGTTGGGATGACTATTCCGACATCCGAGTTCTCCAAGCTTTTGGAATACCTGAATCCCCATAGTTCAATCAAACTGAATGGAGT
AACCAGTGGCACTGGTGGTAACATTCATGGGGCCGAGTTCATCCATATCAGAATCCGACTCATCGTAGTCGTACCATCCTGCAGGAGAATCCTCATCCTGTCCAGTTTTG
GTCGAAGGAACATGAAGCTCAGACAAAGGAACGGGAAGTGGCTCCTCAGAGAACAGTTCGGAAGACATGCTTCTAGACCGATCGGCTTTTCTATTGTGTTGAATGATATA
ATTTCAAAATCAGGAAGTTCGGAACAACCCGGCCATGATTCTTCAGTCAAGTTGCCTAGAGTATTCTGTTACCTTCTTGAACCGAGCTTTCTGTTCCTGGAACAATTGCA
GACGGCCGAGAAGCAGCTAGAACTTGGGATAAAGAAAATCATAAGCCTTCAACATGAACAGATGAATACTACATTTAATCAAAATTTCAGAAACATCCAACCTGCAACTA
ATGAGTTGAATGGACCGTTCACAGTGGTTCCTCACATAATCGAGCTAAATTTGAGGAACGGAGTGTGTAAAGAATCTCCACATTCGATTTTATTCCCCCTCAAATTCGAC
TTCTCGTCATCTAAACAGGCTTATGTAATATGCACGACTGTAATTGAATACGAAAGCTCTTTTCTCGCAGATCTTAGACTAAAAAGAAGATTAAAAGAGAATTACCTGTC
CAAAATCGGCAAGCTTGAGCACGCCATCATCGGAGATCAACAAATTGCTAGGTTTCAAATCCCTATGCACGATCATATTCCTATGACAAGCATCAAGACCACTCAAAATC
TGGATCATCCACCGCTTCAACTCCCCGACCGCAAGCCCCCGCCCAGATTCTACCCCGCCCGATCCTCGCTTCTTCGCCTCCGCTATAACGGTGGCCAAATCCGTTCTCAT
AAACTCGAGAACAAGCACGGCATCCTCATCCTCGCGCCAAAAGTACTCGTGCAGAACGACGACATTAGGCGAACCTTGAAGGATTTGAAGCGCCTCGATTTCGCGGAACG
CCGACTGATAATCGTGGATCTCCTTCAAGGCGACGATGACGCCATCGGAGAGCCGCCGCGCACGGTGGACATCGGAATAAGCGCCGGATCCGACCCGCTCGAGGATCTCG
TACTTCTGGATGATATCCGGCCGAGTGTGGATGCTCCAGCTCTTAGCCGATGA
Protein sequenceShow/hide protein sequence
MDTTSFKKDVGMTIPTSEFSKLLEYLNPHSSIKLNGVTSGTGGNIHGAEFIHIRIRLIVVVPSCRRILILSSFGRRNMKLRQRNGKWLLREQFGRHASRPIGFSIVLNDI
ISKSGSSEQPGHDSSVKLPRVFCYLLEPSFLFLEQLQTAEKQLELGIKKIISLQHEQMNTTFNQNFRNIQPATNELNGPFTVVPHIIELNLRNGVCKESPHSILFPLKFD
FSSSKQAYVICTTVIEYESSFLADLRLKRRLKENYLSKIGKLEHAIIGDQQIARFQIPMHDHIPMTSIKTTQNLDHPPLQLPDRKPPPRFYPARSSLLRLRYNGGQIRSH
KLENKHGILILAPKVLVQNDDIRRTLKDLKRLDFAERRLIIVDLLQGDDDAIGEPPRTVDIGISAGSDPLEDLVLLDDIRPSVDAPALSR