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Lsi11G002780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:2843984..2847139
RNA-Seq ExpressionLsi11G002780
SyntenyLsi11G002780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061572.1 hypothetical protein E6C27_scaffold41G001340 [Cucumis melo var. makuwa]8.3e-2096.3Show/hide
Query:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
        V+LGDLIRNI+IVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
Subjt:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
KAE8651522.1 hypothetical protein Csa_023920, partial [Cucumis sativus]5.0e-1792.16Show/hide
Query:  ELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAE
        ELGDLI NI+IVPTKKHGDATAEDI+SGFLLLDHPEASLSKTGFPAVS+AE
Subjt:  ELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAE
TYK10702.1 hypothetical protein E5676_scaffold332G00110 [Cucumis melo var. makuwa]8.3e-2096.3Show/hide
Query:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
        V+LGDLIRNI+IVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
Subjt:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
TrEMBL top hitse value%identityAlignment
A0A5A7V070 Uncharacterized protein4.0e-2096.3Show/hide
Query:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
        V+LGDLIRNI+IVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
Subjt:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
A0A5D3CHF0 Uncharacterized protein4.0e-2096.3Show/hide
Query:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
        V+LGDLIRNI+IVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
Subjt:  VELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGFPAVSEAELR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCGGAGATTTTCCACTGGGAAGAAAAAATCAGAAGCGAGATTTTCACCGTTAGTAGGAGACTAACAACACGAACTGTCGCCGGAGACTACGTGGCGGCAGGAAA
TCAGAGTTCAATTCCGATCGGAGGCTCTCGCAGACCAAACAGGACGTTGATCGTCGTGTTCGGAGGGAAAAAACAACAATCGACGGTGGAATTAGGCGATTTAATCAGGA
ATATCGTTATCGTGCCAACAAAGAAGCATGGAGATGCAACGGCCGAGGATATAGAATCTGGTTTTCTGTTGCTTGATCATCCGGAAGCATCGCTTTCGAAAACTGGTTTT
CCGGCGGTTTCTGAGGCGGAGTTGCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCGGAGATTTTCCACTGGGAAGAAAAAATCAGAAGCGAGATTTTCACCGTTAGTAGGAGACTAACAACACGAACTGTCGCCGGAGACTACGTGGCGGCAGGAAA
TCAGAGTTCAATTCCGATCGGAGGCTCTCGCAGACCAAACAGGACGTTGATCGTCGTGTTCGGAGGGAAAAAACAACAATCGACGGTGGAATTAGGCGATTTAATCAGGA
ATATCGTTATCGTGCCAACAAAGAAGCATGGAGATGCAACGGCCGAGGATATAGAATCTGGTTTTCTGTTGCTTGATCATCCGGAAGCATCGCTTTCGAAAACTGGTTTT
CCGGCGGTTTCTGAGGCGGAGTTGCGCTGA
Protein sequenceShow/hide protein sequence
MDSEIFHWEEKIRSEIFTVSRRLTTRTVAGDYVAAGNQSSIPIGGSRRPNRTLIVVFGGKKQQSTVELGDLIRNIVIVPTKKHGDATAEDIESGFLLLDHPEASLSKTGF
PAVSEAELR