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Lsi11G002950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:3036228..3039514
RNA-Seq ExpressionLsi11G002950
SyntenyLsi11G002950
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021264.1 hypothetical protein SDJN02_17952, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3085.19Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLNPYICFNHCSYY
        MA+P+DP+SREA PKK+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYP    ICF+HCSY+
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLNPYICFNHCSYY
XP_022966034.1 uncharacterized protein LOC111465738 [Cucurbita maxima]2.6e-2490.91Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MA+P+DP+SREA PKK+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
XP_038891090.1 uncharacterized protein LOC120080491 isoform X1 [Benincasa hispida]2.3e-2895.77Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLNP
        MAAPFDPSSREAVP+KQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVY  NP
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLNP
XP_038891091.1 uncharacterized protein LOC120080491 isoform X2 [Benincasa hispida]3.7e-2698.48Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAAPFDPSSREAVP+KQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
XP_038891092.1 uncharacterized protein LOC120080491 isoform X3 [Benincasa hispida]3.7e-2698.48Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAAPFDPSSREAVP+KQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
TrEMBL top hitse value%identityAlignment
A0A6J1CPL9 uncharacterized protein LOC1110131381.4e-2390.91Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAAP+DP++REAV KKQ AP KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
A0A6J1FDN8 uncharacterized protein LOC1114444361.3e-2490.91Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MA+P+DP+SREA PKK+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
A0A6J1G3Q4 uncharacterized protein LOC1114504991.4e-2389.39Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAAPFD +SREAVPK++SAP KFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
A0A6J1HSI9 uncharacterized protein LOC1114657381.3e-2490.91Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MA+P+DP+SREA PKK+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
A0A6J1KDE7 uncharacterized protein LOC1114938836.4e-2492.42Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MAAPFD +SRE VPKK+SAP KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein1.5e-1766.67Show/hide
Query:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        MA+  DPS      KK+ AP KFLVPL+YAP LPLIR++LR  PV+RDRLF  VL GAFAHGFYLV
Subjt:  MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGCCCTTCGATCCCAGTTCTCGGGAGGCTGTTCCGAAGAAGCAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCGTTTATGCCCCTGTTCTTCCTCTCATTAG
AATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGGTGCTTTTGCCCATGGCTTTTACCTTGTGTATCCTCTTAACCCTTATATTT
GCTTTAATCATTGCTCATATTACATTGAATGCACATTCTTGAATCTTGCGATTTCCATTTTTCTCTGTTCATTTGTTGATGATCTGCATACGTTGTTGTTTAAGTTATCT
TCTTATTTAAGAATTGTTATGCAGCCCCACCATTTATGTTTTCTAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATTTCTGTTTTTCAATTGAATAGCTTCGAGAGAGAGAAAAACCGAGAGGGATCGTGGATGAAAGGAAACTAATTACCACTTTCCATTCCCGCGGGCTGAAGCTGAAGTTG
TTTTTCCAAAAGCCGCCGCCTGCCATCACATCGACAGCCGCCGGTTTCCACCTCCGCCATGGCCGCGCCCTTCGATCCCAGTTCTCGGGAGGCTGTTCCGAAGAAGCAAT
CAGCCCCATTCAAGTTCTTGGTTCCTCTCGTTTATGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAAAACCCTGTTGTGAGGGATCGGCTGTTCACGGCGGTT
TTGGCTGGTGCTTTTGCCCATGGCTTTTACCTTGTGTATCCTCTTAACCCTTATATTTGCTTTAATCATTGCTCATATTACATTGAATGCACATTCTTGAATCTTGCGAT
TTCCATTTTTCTCTGTTCATTTGTTGATGATCTGCATACGTTGTTGTTTAAGTTATCTTCTTATTTAAGAATTGTTATGCAGCCCCACCATTTATGTTTTCTAGAATAGC
ATTTTCATTGCTATGTATTGCATCATTGTAGAACCGAAGTGATCAAAAGGAAAAGGGGATCTAGCTACATTTTGGTGGGGTATTTAGATTAATGTGGTATTGGAAATTAA
CTTAGTCTAAGTTCAAAAGTTTTCCGAGTTGTTGATTTAATGTTGATTGATCTGAGGCTACTACAACAAAAGTATTACAGAATCGTTGATTTTGATTGATCTGAGAAATG
TGCTTTCTCATCGTTCTTAGAGTATGCGAGTATTATGGGCCGTTGGAAAAGGCGCAGATGTAAGTTACTACTGGATTAGCATCTAGCCAAGTTGTCATGCAAGTGCAAAT
TTGTATAAATTAGACACGCAGGGTTAGGAGGAGGGAGGGATGAAACCACCGTAATTTGGCCTATTGGTTAGAAAGAGCCATATAAATAATAAATAGATCAGAGGTAATGA
GTTCAAATTATGTTAGCCACCTACCTAAGATTTTATATTCTATGAGTTATCTTAGCAACCAAATAGAGTATGGTTAAGCAGTTGTATCGTAAGAATAGTTGAAGTACGAC
TTATGTCCTAAGCCAAAACTTGTCCACATTCATATTTCACGAGTGATTCCTGCCTGCAACTTAGAAATCCCTCACACTTGAGCTTCATAAAATGATTATTTGGAGCCTTG
TTCATTTGGTTTTTACAAACTCATTGGCCAACAAGTTCTATGGGAATGCTTGTAAATTTTCAAGCATTTGTTCTTGCTTGCAGTGAAACTTTTCTCAATGATATAATGTA
GTATGTACTGTGTGATTGATGTCCTCCTTATTGCTATTGATTGATTGAATTCCTCTTCACTCTATTCATATTTGAGCTTGTAAAAGGAGGTTTTAGGAGGAGGATCCTGT
TTTCTCTGCTTATAACTGCATAAACTTTGCACAAGGCTCAGATGGCAAAACCAAACTCATCTGCATTTAGGCTTAATGACCTTTAGATGCCTTTAGGAAATTTTCTTCCT
ACTCTGCTGATAGGTTTTTGGAAAAAGAATAATTTTATTTCGATGGTTTGAGTTTATTTTAAATGAAATCAAGTGAAAATAGGAAGGATCAAATTTGATGTACTTTAGAA
AATTTAGAATTTAAATTGATACAATTATTTAGGATTTTAATTGATATAACTTCGAAACTTAGGGGTATATACTGTTCCTTTTTTAAAAAAAAATTAAAATGTTCAATTAC
AAAATTGATATATATTTGAGTTGTGTTCCTTGATGGGTATGATCAGAACTGATATCTACGATGCTGAGAGCAAGTGAGCTCAATTTCCCACCTTCACCTGATGTTTGCTG
AGAGATCATTTTTACCTCCCCCACCCAATAATCCGCATCATTTTTTTTTTTTTACTTATTATTATTACTGGAACAATGAATTATATATTTTACATGGGACTTTTGACTAC
TGGTAAGACTTTAGAGTGTGTTGGATATTATGAAATTCATGTGCATGAATGATGATTAATTTCTAGTCTTCTTGAACCACACATTAAGTTTTGGGGTCGCATTACAAATT
GTTTTTCATATTACTTTAGGAACCTATCATATCAAATTCTTGAGCACGTTACACAAATTTCAAAGCGTTTATTTTTAAACTTTACATAATACATACATGCTGTAGCTGAA
TGAAACCGATTTGTTTGTCATTTACATGGTACATATTGTGATCGAAATAACCCAGAATCCGAGTCAAAAGTGGATATTCTTTCACCCCAGATTGACAGATTTTGACTCAT
TTGAATAACAGATATGAAAATTCCCTCCCCCTAATTCCATACTTCATTTACAGATACAAAATTAATCCAAACATTCATCAACCAAGAAACAAGGTAAGAGATTACAAGAT
GTGTACCAGATAATTAAATCACCACCACCGGAATCTCAGATTCAAAATCCAGACTGTTTTTTCTTTTAATTTCAGATGAATTGTTTATGGAATTGGAAGGCTATTTGTTA
GTGTTTGAGAAATCAGAAGCCAGGCGAGATGCAATGGCTGAATGGTACATTCCGTCCTGAAACGAATTACCCTTCGTTGTCATAATTCGGAGTTGCCTCGCCTTTTCCTC
CGTGAAGCAACCGATTGAGAATCGGGATTCTGCCACCTTCTCTGTTGAATCCAAATCTGGCTCCGTGCTGTCACTGATGTAGTCAAGCAGGCCAGGCCTCCATTGAGGCC
TCCCTTGCTGGTGGGGTTGAGGTTTCCGGTGACCGAAGTCGGAGCCGGAGGTGGCAGATGGTCGGATTCCGATGGGGCGAAAGATGAGTAGATTGGTGGTCATTCTTTTG
GGAAGGACGAATTGGAAAAGGAGGAATAAATAGTTGGTTGGTAATTTTTTAAATTTCTAATTATAATTTGTGCCCCGGAAAAGAAATCATAATAAATAGTCAATTTCCAT
TGCAGTTTATTGTTAAACAAAATAGGTTTGAAACTATTTTAGAATTTGTTTAAATTTGGCTCATATATTTC
Protein sequenceShow/hide protein sequence
MAAPFDPSSREAVPKKQSAPFKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLNPYICFNHCSYYIECTFLNLAISIFLCSFVDDLHTLLFKLS
SYLRIVMQPHHLCFLE