; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G002980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G002980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationchr11:3086757..3090405
RNA-Seq ExpressionLsi11G002980
SyntenyLsi11G002980
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021261.1 hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-5090.57Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        M+PRQLRT+FTGAAVI GGI TL FASFLTIQTLR TAEAKR KIALPC+ACRGKGFY CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
XP_004139324.1 uncharacterized protein LOC101203873 [Cucumis sativus]8.7e-5394.34Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLR+TAEAKR KI LPCKACRGKGFY CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
XP_008457839.1 PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo]1.3e-5396.23Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLRLTAEAKR KIALPCKACRGKGFY CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
XP_022142951.1 uncharacterized protein LOC111012944 [Momordica charantia]7.8e-5497.17Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKR KIALPCKACRGKGFY CKLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
XP_038889623.1 uncharacterized protein LOC120079492 [Benincasa hispida]1.3e-5396.23Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIP+QLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKR KIALPCKACRGKGFY CKLC+GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
TrEMBL top hitse value%identityAlignment
A0A0A0LI05 Uncharacterized protein4.2e-5394.34Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLR+TAEAKR KI LPCKACRGKGFY CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
A0A1S3C6K9 uncharacterized protein LOC1034974246.5e-5496.23Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLRLTAEAKR KIALPCKACRGKGFY CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
A0A5D3BFD4 Uncharacterized protein2.1e-4495.65Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
        MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLRLTAEAKR KIALPCKACRGKGFY CKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
A0A6J1CNQ8 uncharacterized protein LOC1110129443.8e-5497.17Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKR KIALPCKACRGKGFY CKLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYEV
        GKGYEV
Subjt:  GKGYEV
A0A6P4BUI7 uncharacterized protein LOC1074359333.3e-4275.24Show/hide
Query:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL
        MIP+QLRT+ TGAAVILGGI TLN  S  TI TLRL  EAKR K+ALPC+ C+GKGFY C+LC+GNA IQWSPL DP+A+NPC+CPTC+GNRVQRCLNCL
Subjt:  MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCL

Query:  GKGYE
        GKGY+
Subjt:  GKGYE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20220.1 zinc knuckle (CCHC-type) family protein1.6e-0438.18Show/hide
Query:  LPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG
        LPC  CRG+G+ +C  C     I+ S L          CP C+G  +  CL CLG
Subjt:  LPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG
AT5G20220.2 zinc knuckle (CCHC-type) family protein1.6e-0438.18Show/hide
Query:  LPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG
        LPC  CRG+G+ +C  C     I+ S L          CP C+G  +  CL CLG
Subjt:  LPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACCGAGGCAATTGCGAACAGTCTTCACCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTCGCTTCTTTTCTCACTATTCAAACGCTTCGTCTCAC
TGCTGAAGCCAAGCGGGGAAAGATTGCTTTGCCCTGTAAGGCTTGTAGAGGAAAGGGATTCTATACATGCAAATTATGCCGAGGAAATGCTGTTATTCAGTGGTCGCCAT
TGTCTGATCCTATTGCCATGAACCCCTGTGTGTGCCCGACTTGTGAGGGAAACAGGGTGCAACGTTGCCTAAACTGCCTCGGTAAAGGATATGAAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATCTGGTTCGCGCCATCCTCCGCCAGCGGACTCTCTCAACGTTCTCTTTCACCAGAAATGATACCGAGGCAATTGCGAACAGTCTTCACCGGCGCCGCCGTCATCCTCGG
CGGAATTTGCACTCTCAACTTCGCTTCTTTTCTCACTATTCAAACGCTTCGTCTCACTGCTGAAGCCAAGCGGGGAAAGATTGCTTTGCCCTGTAAGGCTTGTAGAGGAA
AGGGATTCTATACATGCAAATTATGCCGAGGAAATGCTGTTATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGTGTGTGCCCGACTTGTGAGGGAAAC
AGGGTGCAACGTTGCCTAAACTGCCTCGGTAAAGGATATGAAGTATGATTGACCTATGACATTGACAACAAGTGTAACATTAGCCTATTTGTTTCTCAGAAATTTATTTT
CCACCAATTGAATGGTGTTTCTTAGCTTTTGGAGTTGTCTTGTAACCTTAGAAGTCTCAGCATGCCAAAGGGAGGGCAGGAGACCGTTCTGTGTCTCATCATAGATTAAA
ATTGTACTCATTTACATGCAGCTTGTTGGTAGGTGGTAGCATTAATCGGCAATGACTTTAGAAGCCAAAGTAACGGTAATAGAATGGAAAGGACCACTGCGTTTTTCATG
AATGCAAAAATAAGAAGTTGCTTCAATAAGCAACAATGCCAACAAGGGACTACAGGAATTTTCTGAGTCCTGATACTCTTGTTGAGGATGGGGACATTGATATCCTTTTG
GCCTGTTGAGAACTGAAATTGATGTGAAGTCTAAAAGGTAGTTTAGAACCTCTGGATTCAAAGGAGTGAAGGACAATTGAAACTAGAAGATAATAGACTTTGGGGTTGAA
GATCCAATGAACTGGAAACTGGATTTTCCTTCACAGGGAATGAAATGATTACATATATCCAGAAACAATGCAAGACGACACTATTTAATTGTCGAAGTTTGTTGAATCAG
CTTGATCGCTTCTTACATTGACAATGAAAGAAAACATCTGACTTTGCTGCTTTGGTATCTTTAAGGTGGGAGGGAGGTCGAAATGGAAACTGTTTCGCTGATGCTACCAA
GTACCGATAACTACTTTACTGAGTAGGGCCTTGCCTGCTTTAAACATTGAACATGTAGAGCCTGTTTAAGTTGTTCAGGAACCTTTACATCCATTCTCTTTTTGGTATGT
AATTCTTTTATGTTTTAGCTGGAAAGGCATATCATCTTTAACTCTAACGCATTGTATGTTTCGAAATAACACCAATAGGTTAGTTTTGAGAACACTGCAAACATAAGTGA
AAACGTCGACAGGAGACAACCAGTTTGACTCGAAACATAACAACCGATCTGTCCCCTCTAACGCCATTGCAGGTATAAATTCCATCAGAAATCAGCAAAAGCGCAAACGA
ATGATCAAATGGTGTCTCTTGCAGCTGAAGGAAGGTTATTTCATCGCTTCAACTGCCATACCTCATTATTTGCTCGTAAGGTTACTTGTGATTGTTAATACTTGATATTT
TTCATTTTTTTCATGATTAAAGTATATATTGGCAGAACATTCACACTTCCATTACTTTATTATTACTACTATTTTGTTTGTTTTTAATTTGTTTAGTGGGTAAAAAAATT
AGTCTGACAAACTAGAATCATGTGATGGAAGGGAAGGCAGGTTGTTTATTGTTGTTGTTTTGTAGAAAAAAAGAAGGCAGGTTGTTGAAGGTAGAAAAA
Protein sequenceShow/hide protein sequence
MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRGKIALPCKACRGKGFYTCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV