CuGenDBv2

Gene ID	Lsi11G003050
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	binding
Genome location	chr11:3169268..3173058
RNA-Seq Expression	Lsi11G003050
Synteny	Lsi11G003050
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR006597 - Sel1-like repeat IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061595.1 Sel1 domain-containing protein [Cucumis melo var. makuwa]

1.6e-124

85.09

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRPPF K FSNP  LNFLLRFSQ+RELHSRNRKAME IAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAA+MGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG  TRKARK+PD S+MSS+EMAREQFNAAA+SGCDLGLKWLNRLEEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

XP_004139315.1 uncharacterized protein LOC101222228 [Cucumis sativus]

2.2e-121

83.64

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLR  F K FSNP  LNFLLRFSQ+RELHSRNRKAME IAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAA+MGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG  TRKARK+PD S+MSS+EMAREQFNAAA+SGCDLGLKWLNRLEEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

XP_008457729.1 PREDICTED: uncharacterized protein LOC103497349 [Cucumis melo]

4.7e-124

85.09

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRPPF K FSNP  LNFLLRFSQ RELHSRNRKAME IAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAA+MGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG  TRKARK+PD S+MSS+EMAREQFNAAA+SGCDLGLKWLNRLEEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

XP_022143226.1 uncharacterized protein LOC111013143 [Momordica charantia]

2.2e-121

84.36

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRP F  S S P  LNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PG CKA+GAALLVEAADMGD DAQYELG RLRVE K +                L   ALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG STRKARK+PDG VMS VEMAREQFNAAA++GCDLGLKWLNRLEEEE+SLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

XP_038889431.1 uncharacterized protein LOC120079340 [Benincasa hispida]

3.6e-124

86.55

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRPPFAK FSN   L+FLLRFSQYRE+HSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PG CKAVGAALLVEAADMGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG STRKARK PDG VM+SVEMAREQFNAAAVSGCDLGLKWLNR+EEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIX6 Uncharacterized protein

1.0e-121

83.64

Show/hide

Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLR  F K FSNP  LNFLLRFSQ+RELHSRNRKAME IAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAA+MGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG  TRKARK+PD S+MSS+EMAREQFNAAA+SGCDLGLKWLNRLEEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

A0A1S3C6V2 uncharacterized protein LOC103497349

2.3e-124

85.09

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRPPF K FSNP  LNFLLRFSQ RELHSRNRKAME IAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAA+MGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG  TRKARK+PD S+MSS+EMAREQFNAAA+SGCDLGLKWLNRLEEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

A0A5A7V6X1 Sel1 domain-containing protein

7.7e-125

85.09

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRPPF K FSNP  LNFLLRFSQ+RELHSRNRKAME IAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAA+MGDADAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG  TRKARK+PD S+MSS+EMAREQFNAAA+SGCDLGLKWLNRLEEEEKSLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

A0A6J1CPM3 uncharacterized protein LOC111013143

1.0e-121

84.36

Show/hide

Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRP F  S S P  LNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PG CKA+GAALLVEAADMGD DAQYELG RLRVE K +                L   ALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET
        SLLLKGV VPESLTKFS KNG STRKARK+PDG VMS VEMAREQFNAAA++GCDLGLKWLNRLEEEE+SLSTE+
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTET

A0A6J1G307 uncharacterized protein LOC111450363

8.9e-121

83.7

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Query:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
        MLRPPFAK   NP   + LLRFSQYRELHSRNRKAMELI+KGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV
Subjt:  MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHV

Query:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
        PG CKAVGAALLVEAADMGD DAQYELGCRLRVE K +                L   ALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAADMGDADAQYELGCRLRVEVKLL---------------VLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTETG
        SLLLKGV VPESLTKFS KNG STRKARK+PDG  MSSVE AREQFNAAA+SGCDLGLKWLNRLE+EE++LSTE+G
Subjt:  SLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTETG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25570.1 binding

3.4e-96

71.54

Show/hide

Query:  FSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGDA
        F Q R LHSRN KAME +AKGWSA+KEV+RVIDYCELNDRRLIPLLR AKENFELALE DN NTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMG+A
Subjt:  FSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGDA

Query:  DAQYELGCRLRVE-------------VKLLV--LVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNG
        DAQYELGCRLRVE             ++  V  L   AL+LLG VYLTGDCVKQD+ SA+WCFHRASEKGHAGAAIAYGSLLL+GV VPESLTK +    
Subjt:  DAQYELGCRLRVE-------------VKLLV--LVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNG

Query:  PSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTE
           ++ARK+ +   M+ +EMA+EQF  AA +GCDLGLKWL R+E+EEK L  E
Subjt:  PSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTE

AT2G25570.2 binding

3.2e-62

67.2

Show/hide

Query:  YWLSKLHLKYHVPGACKAVGAALLVEAADMGDADAQYELGCRLRVE-------------VKLLV--LVASALFLLGAVYLTGDCVKQDIASALWCFHRAS
        YWLSKLHLKYHVPGACKAVGAALLVEAADMG+ADAQYELGCRLRVE             ++  V  L   AL+LLG VYLTGDCVKQD+ SA+WCFHRAS
Subjt:  YWLSKLHLKYHVPGACKAVGAALLVEAADMGDADAQYELGCRLRVE-------------VKLLV--LVASALFLLGAVYLTGDCVKQDIASALWCFHRAS

Query:  EKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTE
        EKGHAGAAIAYGSLLL+GV VPESLTK +       ++ARK+ +   M+ +EMA+EQF  AA +GCDLGLKWL R+E+EEK L  E
Subjt:  EKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTE

AT2G25570.3 binding

3.4e-96

71.54

Show/hide

Query:  FSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGDA
        F Q R LHSRN KAME +AKGWSA+KEV+RVIDYCELNDRRLIPLLR AKENFELALE DN NTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMG+A
Subjt:  FSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGDA

Query:  DAQYELGCRLRVE-------------VKLLV--LVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNG
        DAQYELGCRLRVE             ++  V  L   AL+LLG VYLTGDCVKQD+ SA+WCFHRASEKGHAGAAIAYGSLLL+GV VPESLTK +    
Subjt:  DAQYELGCRLRVE-------------VKLLV--LVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNG

Query:  PSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTE
           ++ARK+ +   M+ +EMA+EQF  AA +GCDLGLKWL R+E+EEK L  E
Subjt:  PSTRKARKDPDGSVMSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTCCGGCCGCCGTTTGCAAAGAGCTTTTCGAATCCCAGACCTCTCAATTTTCTGCTTCGTTTCAGTCAATATAGGGAATTGCATAGCAGAAATCGGAAGGCCATGGA
GTTGATTGCCAAAGGATGGAGTGCTTTGAAGGAAGTCGATAGAGTTATTGATTATTGTGAGCTCAATGATCGCCGTCTCATCCCGCTTCTTCGGACAGCGAAGGAAAACT
TTGAATTGGCTCTTGAAGTTGATAATTCAAATACCCATGCTAGGTATTGGTTGTCAAAATTGCATTTGAAGTATCATGTCCCAGGAGCATGTAAAGCTGTAGGAGCTGCA
TTATTGGTTGAAGCAGCAGATATGGGGGATGCAGATGCACAATATGAACTTGGTTGTCGTCTGAGAGTTGAGGTTAAACTCCTAGTTCTTGTTGCTAGTGCACTTTTTCT
TTTAGGTGCAGTATATCTGACTGGAGACTGCGTAAAGCAAGATATTGCATCAGCATTATGGTGCTTCCATCGGGCTTCAGAGAAGGGTCATGCTGGTGCAGCTATAGCAT
ATGGATCTCTTCTTCTCAAAGGTGTTGTAGTACCCGAATCTCTAACGAAATTTAGCTCAAAGAATGGTCCTTCAACCAGAAAGGCCAGAAAAGACCCAGATGGTTCAGTG
ATGAGTTCAGTTGAGATGGCTAGAGAACAGTTCAATGCAGCAGCAGTCTCAGGGTGTGATCTTGGGCTCAAATGGTTAAACAGACTCGAAGAGGAAGAAAAGAGTTTGTC
AACCGAAACTGGATGA

mRNA sequence

Show/hide mRNA sequence

CTCGACTCAAACCTCACGGAAGGAAGGCCACTGCTTCACCAAGGAAGACGAAGATGCTCCGGCCGCCGTTTGCAAAGAGCTTTTCGAATCCCAGACCTCTCAATTTTCTG
CTTCGTTTCAGTCAATATAGGGAATTGCATAGCAGAAATCGGAAGGCCATGGAGTTGATTGCCAAAGGATGGAGTGCTTTGAAGGAAGTCGATAGAGTTATTGATTATTG
TGAGCTCAATGATCGCCGTCTCATCCCGCTTCTTCGGACAGCGAAGGAAAACTTTGAATTGGCTCTTGAAGTTGATAATTCAAATACCCATGCTAGGTATTGGTTGTCAA
AATTGCATTTGAAGTATCATGTCCCAGGAGCATGTAAAGCTGTAGGAGCTGCATTATTGGTTGAAGCAGCAGATATGGGGGATGCAGATGCACAATATGAACTTGGTTGT
CGTCTGAGAGTTGAGGTTAAACTCCTAGTTCTTGTTGCTAGTGCACTTTTTCTTTTAGGTGCAGTATATCTGACTGGAGACTGCGTAAAGCAAGATATTGCATCAGCATT
ATGGTGCTTCCATCGGGCTTCAGAGAAGGGTCATGCTGGTGCAGCTATAGCATATGGATCTCTTCTTCTCAAAGGTGTTGTAGTACCCGAATCTCTAACGAAATTTAGCT
CAAAGAATGGTCCTTCAACCAGAAAGGCCAGAAAAGACCCAGATGGTTCAGTGATGAGTTCAGTTGAGATGGCTAGAGAACAGTTCAATGCAGCAGCAGTCTCAGGGTGT
GATCTTGGGCTCAAATGGTTAAACAGACTCGAAGAGGAAGAAAAGAGTTTGTCAACCGAAACTGGATGAAGCTGCATGGTGTTGTATCAGATTGCTTTGACATCTCCAAA
GGTCTTTTCTGACGGTTTTATTTGGGAAATGTGGTTCATTATGTATCTTACATATTATTATTATCTTGAAAAGACGTGTAACTATTAACTTGAAGATTATTCAATTCATG
GATGAATGATATGCTTTCGACTAAGTATGGTTTAATT

Protein sequence

Show/hide protein sequence

MLRPPFAKSFSNPRPLNFLLRFSQYRELHSRNRKAMELIAKGWSALKEVDRVIDYCELNDRRLIPLLRTAKENFELALEVDNSNTHARYWLSKLHLKYHVPGACKAVGAA
LLVEAADMGDADAQYELGCRLRVEVKLLVLVASALFLLGAVYLTGDCVKQDIASALWCFHRASEKGHAGAAIAYGSLLLKGVVVPESLTKFSSKNGPSTRKARKDPDGSV
MSSVEMAREQFNAAAVSGCDLGLKWLNRLEEEEKSLSTETG

Lsi11G003050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome