; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G003160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G003160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF3119 family protein
Genome locationchr11:3262200..3265732
RNA-Seq ExpressionLsi11G003160
SyntenyLsi11G003160
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021467 - Protein of unknown function DUF3119


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061605.1 DUF3119 family protein [Cucumis melo var. makuwa]4.9e-4995.15Show/hide
Query:  SAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFP
        SAAGGLAYTDNLL AVPIGLLGLLLLVQATRVRFVF+NEALEVKIGD+L DSGENAFVGGKNRWKYSTFVNWELWWP+FPILVYFKETQTKPEGQVHFFP
Subjt:  SAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFP

Query:  VIF
        VIF
Subjt:  VIF

KYP55686.1 hypothetical protein KK1_001909 [Cajanus cajan]2.9e-4982.2Show/hide
Query:  MGCTLFSASQFSSCPSAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYF
        M  TL SA  F    S AGGL YTDNL+PAVP GLLGLLLL Q TRVRFVFD+EALEVK+GDQL++SGEN FVGGKNRWKYSTFVNWELWWPNFPILVYF
Subjt:  MGCTLFSASQFSSCPSAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYF

Query:  KETQTKPEGQVHFFPVIF
        KETQTKPEGQ+HFFPVIF
Subjt:  KETQTKPEGQVHFFPVIF

XP_004139312.1 uncharacterized protein LOC101221528 [Cucumis sativus]1.7e-4996.08Show/hide
Query:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
        A GGLAYTDNLL AVPIGLLGLLLLVQATRV+FVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWP+FPILVYFKETQTKPEGQVHFFPV
Subjt:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV

Query:  IF
        IF
Subjt:  IF

XP_022142984.1 uncharacterized protein LOC111012982 [Momordica charantia]3.4e-5097.06Show/hide
Query:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
        AAGGLAYTDNLL AVP+GLLGLLLLVQATRVRFVFD+EALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
Subjt:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV

Query:  IF
        IF
Subjt:  IF

XP_038889449.1 uncharacterized protein LOC120079360 [Benincasa hispida]8.2e-52100Show/hide
Query:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
        AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
Subjt:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV

Query:  IF
        IF
Subjt:  IF

TrEMBL top hitse value%identityAlignment
A0A0A0LIY3 Uncharacterized protein8.2e-5096.08Show/hide
Query:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
        A GGLAYTDNLL AVPIGLLGLLLLVQATRV+FVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWP+FPILVYFKETQTKPEGQVHFFPV
Subjt:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV

Query:  IF
        IF
Subjt:  IF

A0A151SLH3 Uncharacterized protein1.4e-4982.2Show/hide
Query:  MGCTLFSASQFSSCPSAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYF
        M  TL SA  F    S AGGL YTDNL+PAVP GLLGLLLL Q TRVRFVFD+EALEVK+GDQL++SGEN FVGGKNRWKYSTFVNWELWWPNFPILVYF
Subjt:  MGCTLFSASQFSSCPSAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYF

Query:  KETQTKPEGQVHFFPVIF
        KETQTKPEGQ+HFFPVIF
Subjt:  KETQTKPEGQVHFFPVIF

A0A5A7V6Y0 DUF3119 family protein2.4e-4995.15Show/hide
Query:  SAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFP
        SAAGGLAYTDNLL AVPIGLLGLLLLVQATRVRFVF+NEALEVKIGD+L DSGENAFVGGKNRWKYSTFVNWELWWP+FPILVYFKETQTKPEGQVHFFP
Subjt:  SAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFP

Query:  VIF
        VIF
Subjt:  VIF

A0A5D3BH62 DUF3119 family protein7.0e-4994.17Show/hide
Query:  SAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFP
        SAAGGL YTDNLL AVPIGLLGLLLLVQATRVRFVF+NEALEVKIGD+L DSGENAFVGGKNRWKYSTFVNWELWWP+FPILVYFKETQTKPEGQVHFFP
Subjt:  SAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFP

Query:  VIF
        VIF
Subjt:  VIF

A0A6J1CN08 uncharacterized protein LOC1110129821.7e-5097.06Show/hide
Query:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
        AAGGLAYTDNLL AVP+GLLGLLLLVQATRVRFVFD+EALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV
Subjt:  AAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQVHFFPV

Query:  IF
        IF
Subjt:  IF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGCACTCTCTTCTCTGCTTCTCAATTTTCCTCTTGCCCAAGTGCTGCTGGCGGGTTAGCTTATACTGATAATTTGCTACCAGCTGTACCTATTGGTCTTCTTGG
GCTACTGCTACTGGTCCAGGCTACTCGAGTAAGATTTGTCTTTGACAATGAGGCATTGGAGGTGAAAATAGGAGACCAGCTTGAGGACTCTGGTGAAAATGCCTTTGTGG
GCGGAAAGAATCGTTGGAAATATTCAACTTTTGTGAACTGGGAGTTATGGTGGCCAAATTTCCCCATTCTGGTGTACTTCAAAGAAACTCAAACAAAGCCAGAAGGCCAA
GTGCACTTCTTCCCAGTAATATTTGAAACCTATGGGCGTTGCGTCGACCAGTTGAACTTTACATCAAGATTCTTCTCCATGTACATAATGCATAGACCAGATTTTGAGGC
TGATTTAGTGGCTGCCAAACTTTAG
mRNA sequenceShow/hide mRNA sequence
CGTCCTCATAAAAAAGCAGCAATTTTGATTTGTTTCCGAAGAACAGAAGCGAATTCAGGATCATGGGCTGCACTCTCTTCTCTGCTTCTCAATTTTCCTCTTGCCCAAGT
GCTGCTGGCGGGTTAGCTTATACTGATAATTTGCTACCAGCTGTACCTATTGGTCTTCTTGGGCTACTGCTACTGGTCCAGGCTACTCGAGTAAGATTTGTCTTTGACAA
TGAGGCATTGGAGGTGAAAATAGGAGACCAGCTTGAGGACTCTGGTGAAAATGCCTTTGTGGGCGGAAAGAATCGTTGGAAATATTCAACTTTTGTGAACTGGGAGTTAT
GGTGGCCAAATTTCCCCATTCTGGTGTACTTCAAAGAAACTCAAACAAAGCCAGAAGGCCAAGTGCACTTCTTCCCAGTAATATTTGAAACCTATGGGCGTTGCGTCGAC
CAGTTGAACTTTACATCAAGATTCTTCTCCATGTACATAATGCATAGACCAGATTTTGAGGCTGATTTAGTGGCTGCCAAACTTTAGAGTGTCACCATATAAGTAAATTG
ATATTACCCATACACAGTAAGAGATACATTCATACTGTGAGAATTGAATATCATTATATGTAACTATACCAAGTCTAATGTTACCCTTAAATCGTTTTCTATTCACATAG
CTTAAGACTGGAGCATGTAGGAGAACAAGCAAAAACTAATTCAACCAACTCGATTTACTCAGTTTGAAGCAAGGATTGAAATATTTATTGATATGCCCCCACCTCAAATA
TCATTCAACT
Protein sequenceShow/hide protein sequence
MGCTLFSASQFSSCPSAAGGLAYTDNLLPAVPIGLLGLLLLVQATRVRFVFDNEALEVKIGDQLEDSGENAFVGGKNRWKYSTFVNWELWWPNFPILVYFKETQTKPEGQ
VHFFPVIFETYGRCVDQLNFTSRFFSMYIMHRPDFEADLVAAKL