CuGenDBv2

Gene ID	Lsi11G003170
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Genome location	chr11:3267087..3270928
RNA-Seq Expression	Lsi11G003170
Synteny	Lsi11G003170
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

9.8e-65

88.41

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN
        MA+SICSSTPICSFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGADS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_004139310.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus]

2.7e-70

94.89

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG
        MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFRINE FQ+TN  RLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAV CSQC+GTGVNSVDHFNG
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_008457580.1 PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo]

1.0e-69

93.43

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG
        MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFR+NE  QRTNP R LSFE KASDGADSKQTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNG
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        QFKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTADS
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]

6.3e-64

87.68

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN
        MA+SICSSTPICSFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGA S K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_038889638.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]

1.1e-68

92.7

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG
        MAFS CSSTPICSFNHSSKP  GVL+GNSVPQKAFRIN+ FQRTNP RLLSFEVKASDGADS QTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNG
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        QFKAG LCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFZ2 Uncharacterized protein

1.3e-70

94.89

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG
        MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFRINE FQ+TN  RLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAV CSQC+GTGVNSVDHFNG
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A1S3C5F0 uncharacterized protein LOC103497244

4.9e-70

93.43

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG
        MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFR+NE  QRTNP R LSFE KASDGADSKQTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNG
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        QFKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTADS
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A5A7V544 Chaperone protein DnaJ-like

4.9e-70

93.43

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG
        MAFSICSSTPICSFNHSS PKPGVLVGNSVPQKAFR+NE  QRTNP R LSFE KASDGADSKQTTKYKSIVCTDCDGNGAVLCSQC+GTGVNSVDHFNG
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        QFKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTADS
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A6J1FIB2 uncharacterized protein LOC111444376

3.1e-64

87.68

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN
        MA+SICSSTPICSFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGA S K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A6J1HSG2 uncharacterized protein LOC111465718

8.9e-64

87.68

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Query:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN
        MA+SICSSTPI SFN S+KP PGV VGNSVPQKAFRINE FQRTNP +LLS EVKASDGADS K TTKYKSIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

5.1e-32

53.57

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Query:  MAFSIC--SSTPICSFNHSSK-PKPGVLVG-NSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVD
        MA S+C  SS P   F   SK PKP      N       +  E+ Q    SR  SFEVKA++  ++ Q TK  S+VC +C+G G V CSQC+G GVN +D
Subjt:  MAFSIC--SSTPICSFNHSSK-PKPGVLVG-NSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVD

Query:  HFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
        HFNGQFKAG LCWLCRGK+++LCG CNGAGF+GGF+ST D
Subjt:  HFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

3.1e-29

64.77

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Query:  LSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
        L  + KA++   S K+  K KSI+C DC+GNGA++C++CEG GVNSVD+F G+FKAG LCWLCRGKR+ILCG CNGAGF+GGF+ST D
Subjt:  LSFEVKASDGADS-KQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

3.6e-33

53.57

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Query:  MAFSIC--SSTPICSFNHSSK-PKPGVLVG-NSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVD
        MA S+C  SS P   F   SK PKP      N       +  E+ Q    SR  SFEVKA++  ++ Q TK  S+VC +C+G G V CSQC+G GVN +D
Subjt:  MAFSIC--SSTPICSFNHSSK-PKPGVLVG-NSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVD

Query:  HFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
        HFNGQFKAG LCWLCRGK+++LCG CNGAGF+GGF+ST D
Subjt:  HFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

2.1e-04

42.37

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Query:  CTDCDGNGAVLCSQCEGTG--VNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVG
        CT C+  GA+LCS C GTG  V+S+    G       C  C G  +I+C  C G G VG
Subjt:  CTDCDGNGAVLCSQCEGTG--VNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVG

Sequences

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CDS sequence

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ATGGCTTTTTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCAGTGCCTCAGAAGGCTTTTAGGAT
AAATGAGGTGTTTCAAAGAACAAACCCCAGTAGGCTTTTGTCTTTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAAGCAAACCACAAAATACAAAAGCATAGTTTGCA
CTGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTGAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTG
TGCAGAGGCAAAAGGGATATCCTCTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAG

mRNA sequence

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AACAAAATCACAGGCAATACCATCAGAACGTTAAAGCTCATCAGAAAACTTCTGAATTTCTCTCCTCAAGAACAAATTCAAATTCCAAAACCTCATTTAAATGGCTTTTT
CTATATGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCAGTGCCTCAGAAGGCTTTTAGGATAAATGAGGTG
TTTCAAAGAACAAACCCCAGTAGGCTTTTGTCTTTTGAGGTCAAGGCTTCAGATGGTGCAGATAGTAAGCAAACCACAAAATACAAAAGCATAGTTTGCACTGACTGCGA
TGGAAATGGTGCTGTCCTATGTTCTCAGTGTGAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCA
AAAGGGATATCCTCTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAGTACTTGGTACTGCCAAAGCATGAGTTTTCTTTCAGC
TGCATCAGAAATTGGAGTATTTGAAGTCAATTTATGGCCTATCTGAGATGAAAAAACATATTAGTTTCAGTAATTTTGTATAATGGTTCACATAATTCCCAAGTTTGTAA
TTGAAAATTATGAATGTTTTTCTGCTATTTACTATTTGTTTTGTTGCATTCCCTGAAGATTTGAGATTTTGAGATGTAATATATGACTAGTATATGACTTCAGGTTTCTT
AATTTTAAAACAAATTGTCC

Protein sequence

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MAFSICSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEVFQRTNPSRLLSFEVKASDGADSKQTTKYKSIVCTDCDGNGAVLCSQCEGTGVNSVDHFNGQFKAGGLCWL
CRGKRDILCGGCNGAGFVGGFMSTADS

Lsi11G003170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome