; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G003220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G003220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4050 domain-containing protein
Genome locationchr11:3305189..3308380
RNA-Seq ExpressionLsi11G003220
SyntenyLsi11G003220
Gene Ontology termsNA
InterPro domainsIPR025124 - Domain of unknown function DUF4050


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139307.1 uncharacterized protein LOC101220352 [Cucumis sativus]9.3e-5990.91Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESWFSVWIDR LSCLG+ K APAISGNNLNSRMPSMS+DFWSTSTCDLDE+LTLQSRQNSFIS+TNHNSNHGGV DNLSNHSDFVNHGFVLW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGNCVPAKRTKKNH+TGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

XP_008465549.1 PREDICTED: uncharacterized protein LOC103503177 isoform X2 [Cucumis melo]3.5e-5890.08Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESWFSVWIDR LSCLG+ K APAISGNNLNSRMPSMS+DFWSTSTCDLDE+LTLQSRQNSFIS+TNHNSNHGGV DNLSNHSDFVNHGFVLW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGNCVPAKRTKK+H+TGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

XP_016903413.1 PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo]4.3e-5685.16Show/hide
Query:  MVTRESWFSVWIDRFLSCLG-------ATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGF
        MVTRESWFSVWIDR LSCLG       + K APAISGNNLNSRMPSMS+DFWSTSTCDLDE+LTLQSRQNSFIS+TNHNSNHGGV DNLSNHSDFVNHGF
Subjt:  MVTRESWFSVWIDRFLSCLG-------ATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGF

Query:  VLWSQSRLRWVGNCVPAKRTKKNHLTGL
        VLW+Q+RLRWVGNCVPAKRTKK+H+TGL
Subjt:  VLWSQSRLRWVGNCVPAKRTKKNHLTGL

XP_038889429.1 uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida]6.7e-5790.08Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESW SVWIDR LSCLG  K APAISGNNLNSRMPSMSDDFWSTSTCD DEMLTLQSRQNSFIS+TNHNSNHGG  DNL NHSDFVNHGFVLW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGNCVPAKRTKKNHLTGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

XP_038889430.1 uncharacterized protein LOC120079339 isoform X2 [Benincasa hispida]6.7e-5790.08Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESW SVWIDR LSCLG  K APAISGNNLNSRMPSMSDDFWSTSTCD DEMLTLQSRQNSFIS+TNHNSNHGG  DNL NHSDFVNHGFVLW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGNCVPAKRTKKNHLTGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

TrEMBL top hitse value%identityAlignment
A0A0A0LFZ6 Uncharacterized protein4.5e-5990.91Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESWFSVWIDR LSCLG+ K APAISGNNLNSRMPSMS+DFWSTSTCDLDE+LTLQSRQNSFIS+TNHNSNHGGV DNLSNHSDFVNHGFVLW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGNCVPAKRTKKNH+TGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

A0A1S3CQL1 uncharacterized protein LOC103503177 isoform X21.7e-5890.08Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESWFSVWIDR LSCLG+ K APAISGNNLNSRMPSMS+DFWSTSTCDLDE+LTLQSRQNSFIS+TNHNSNHGGV DNLSNHSDFVNHGFVLW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGNCVPAKRTKK+H+TGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

A0A1S4E5A2 uncharacterized protein LOC103503177 isoform X12.1e-5685.16Show/hide
Query:  MVTRESWFSVWIDRFLSCLG-------ATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGF
        MVTRESWFSVWIDR LSCLG       + K APAISGNNLNSRMPSMS+DFWSTSTCDLDE+LTLQSRQNSFIS+TNHNSNHGGV DNLSNHSDFVNHGF
Subjt:  MVTRESWFSVWIDRFLSCLG-------ATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGF

Query:  VLWSQSRLRWVGNCVPAKRTKKNHLTGL
        VLW+Q+RLRWVGNCVPAKRTKK+H+TGL
Subjt:  VLWSQSRLRWVGNCVPAKRTKKNHLTGL

A0A6J1G589 uncharacterized protein LOC1114508501.0e-5082.64Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESWFSVWIDRFLSCL  TK AP ISGNNLNSRM SMSDDFWSTSTCDLDEMLTLQSRQNSFIS+T++N NHGG  D LSNHSDFVNHG +LW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGN   AKRTK+ HLTGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

A0A6J1KGB3 uncharacterized protein LOC1114936404.5e-5182.64Show/hide
Query:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR
        MVTRESWFSVWIDRFLSCL  TK AP ISGNNLNSRM SMSDDFWSTSTCDLD+MLTLQSRQNSFIS+T++NSNHGG  D LSNHSDFVNHG +LW+Q+R
Subjt:  MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSR

Query:  LRWVGNCVPAKRTKKNHLTGL
        LRWVGN   AKRTK+ HLTGL
Subjt:  LRWVGNCVPAKRTKKNHLTGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15350.1 unknown protein9.4e-0941.89Show/hide
Query:  RMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRWVGNCVP
        + PS+S+DFWSTST D+D  +T  S+ +  +SS+N   +    A N +   ++VN G +LW+Q+R RWVG   P
Subjt:  RMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRWVGNCVP

AT1G15350.2 unknown protein9.4e-0941.89Show/hide
Query:  RMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRWVGNCVP
        + PS+S+DFWSTST D+D  +T  S+ +  +SS+N   +    A N +   ++VN G +LW+Q+R RWVG   P
Subjt:  RMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRWVGNCVP

AT4G32342.1 unknown protein8.0e-0841.27Show/hide
Query:  SDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRW
        SDDFWSTSTCD+D  +T+QS+ ++       ++         SN ++FVNHG +LW+ +R +W
Subjt:  SDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRW

AT5G25360.1 unknown protein2.4e-1235.29Show/hide
Query:  SWFSVWIDRFLSCLGATKSAPAI-------SGNNLNSRM---PSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVL
        SW          C G     P I        G  +  R+   PS+S+DFWSTSTC++D       R  S IS TN+ S     + + SN ++FVNHG  L
Subjt:  SWFSVWIDRFLSCLGATKSAPAI-------SGNNLNSRM---PSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVL

Query:  WSQSRLRWVGNCVPAKRTK
        W+Q+R +W+ N    K+ K
Subjt:  WSQSRLRWVGNCVPAKRTK

AT5G25360.2 unknown protein2.4e-1235.29Show/hide
Query:  SWFSVWIDRFLSCLGATKSAPAI-------SGNNLNSRM---PSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVL
        SW          C G     P I        G  +  R+   PS+S+DFWSTSTC++D       R  S IS TN+ S     + + SN ++FVNHG  L
Subjt:  SWFSVWIDRFLSCLGATKSAPAI-------SGNNLNSRM---PSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVL

Query:  WSQSRLRWVGNCVPAKRTK
        W+Q+R +W+ N    K+ K
Subjt:  WSQSRLRWVGNCVPAKRTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACGCGAGAGAGCTGGTTTTCTGTTTGGATCGATCGATTTCTCTCTTGTTTGGGGGCCACTAAATCTGCACCTGCCATCTCTGGGAATAATCTGAATTCTAGAAT
GCCAAGCATGTCAGATGATTTTTGGAGTACAAGCACATGTGATCTGGACGAGATGCTTACGCTTCAATCTCGACAGAATTCATTTATCAGCTCAACAAACCACAACTCTA
ATCATGGAGGTGTCGCTGACAATTTAAGCAACCATTCTGACTTTGTAAATCATGGGTTCGTTCTTTGGAGTCAAAGCAGGCTTCGATGGGTCGGAAATTGTGTGCCTGCT
AAACGAACTAAAAAAAATCACCTTACAGGATTAAGGTGA
mRNA sequenceShow/hide mRNA sequence
TATGAAAAGAAGATGAAGAAAAGATGAACACGGTTTCGGTTTGTTAATGTTAACTGCTATTAACGGTACGAAATTACTGATTATCAACTGGATCTGGTAAAGTTTCAATG
GAAGTCACAATCACAATAATTTCCTGTCCAATCATACCTTGTTTATCCGATTCTATCCGGTATTAGGGATTTCGATTCGATTTCGATTTCGATTTCGGCATGTTTCTGTG
TTTTGATGTTTGTAATCTGATTATTCGCCGAATATGGTGACGCGAGAGAGCTGGTTTTCTGTTTGGATCGATCGATTTCTCTCTTGTTTGGGGGCCACTAAATCTGCACC
TGCCATCTCTGGGAATAATCTGAATTCTAGAATGCCAAGCATGTCAGATGATTTTTGGAGTACAAGCACATGTGATCTGGACGAGATGCTTACGCTTCAATCTCGACAGA
ATTCATTTATCAGCTCAACAAACCACAACTCTAATCATGGAGGTGTCGCTGACAATTTAAGCAACCATTCTGACTTTGTAAATCATGGGTTCGTTCTTTGGAGTCAAAGC
AGGCTTCGATGGGTCGGAAATTGTGTGCCTGCTAAACGAACTAAAAAAAATCACCTTACAGGATTAAGGTGAGTCTAACTTTACCGCAGATACGTACTTGTTCATGCCAT
CAAAGCTCTATATGCTTATAATGCAAATGAAATCCTTCTCAGCCAATATTTCAAGTAATTAATGAATATTTTCTTATTACATTCTTCAGTTGTTAGAAAATTTGGGTCAT
CAAAAATCAGACTGAAGGTTTTTTGAGTAGCACACATGCCTTTTGGAAAGTCAAATTTCCTGTGGATTTAGATGTTTTCAAATTTTTTACCCCTACCATATTGCTTGCTT
TCTGTTTACAGTTGGTATATGACTAAAGAACTCTTGCTGGAAAGCAAAAGGCCTTACCATCGGCGCATACCTTTATCTGAAATGGTAGACTTTCTGGTAGAAGAATGGGA
AGAAGAAGGGCTGTATTATTGAGCCAGTCAATTGAAAAAAAAAACATCACCTTGTGCATACACTATCTTTGTGACTTTTTTTGTGTTTCGGAGTTTAATTCAACGGCTAC
TACCGCCTTAACTTGGGATCAATTCGATACAAAGTTAACATACAAAATGACACCATTGGTTTGCTAACCTTTTCAATATTGGTACATTGGAGATCTCTAAGTGAGGGGCC
AAGTGTAAAGTAATTCGAAATCGAAGATCTTCTGAGTGATCATCGGCGAGCTAAACGGTAAGCCCCCTCCAACCATCAGCTGATATACATACTTTATACATACATATCAA
ACTTTCTTGATCATTAGTTTAATATATGCAAGAAGCATCAACTTTGCAGTGTGTTTGATGCGGTGTTGATGATTGACTTGTTGTAATTGATGTAAAAGAATAGATATTAA
TCTCTCTAAAGGACCAAAACAACCTCTTTTCCTTGTTTTGAATTCTGATAATATTGAGCTTGATTTTGTGGTGATATTGCTGTCAACTGTGTTGGATGGTAGAGAAAACA
AATAATAGACAAAATCAATCCCCCATTGTCTTTTTGTCTGGTGGTTGTGCCATTAAAAGACTATAAATTTTGAAGGGTTTATGGTTGAAGATGCAAAGATGCTTTTCAAA
CTCTTTTTCAGAAGAGAATACTCACTATTTCAAGGATAT
Protein sequenceShow/hide protein sequence
MVTRESWFSVWIDRFLSCLGATKSAPAISGNNLNSRMPSMSDDFWSTSTCDLDEMLTLQSRQNSFISSTNHNSNHGGVADNLSNHSDFVNHGFVLWSQSRLRWVGNCVPA
KRTKKNHLTGLR