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Lsi11G003250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G003250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncalmodulin-like
Genome locationchr11:3351372..3351635
RNA-Seq ExpressionLsi11G003250
SyntenyLsi11G003250
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]4.5e-2372Show/hide
Query:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK
        SK  FSRE++KEIFREHDIDGDG LSI EL+KA GFLG  +PFYKAHYGMA++D + DG I EDELDKL++YAE+
Subjt:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]6.7e-3583.91Show/hide
Query:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC
        MSRA+SKL+ SRED+KEIFREHDIDGDGRLS+SE+VKAFGF GSILPFYKAHYGMAHAD + DGYI+E+ELDKLV+YAEKFQHKR C
Subjt:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]5.3e-3277.01Show/hide
Query:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC
        MSRA+++L+ SRED+KEIFREHDIDGDGRLS++E+VKAFG  GSILPFYKAHYGMAHAD + DG+I+E+ELDKLV+YA+KFQHKR C
Subjt:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]2.8e-2572.5Show/hide
Query:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKR
        SK  FSRE++KEIFREHDIDGDG LSISEL+KA GFLG  +PFYKAHYGMA+ D + DG I EDELDKL++YAE+FQ +R
Subjt:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKR

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.9e-3077.11Show/hide
Query:  SSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC
        S++L+ SRED+KEIFREHDIDGDGRLS++E+VKAFG  GSILPFYKAHYGMAHAD + DG+I+E+ELDKLV+YA+KFQHKR C
Subjt:  SSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein1.4e-2572.5Show/hide
Query:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKR
        SK  FSRE++KEIFREHDIDGDG LSISEL+KA GFLG  +PFYKAHYGMA+ D + DG I EDELDKL++YAE+FQ +R
Subjt:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKR

A0A0A0LRC1 Uncharacterized protein2.6e-3277.01Show/hide
Query:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC
        MSRA+++L+ SRED+KEIFREHDIDGDGRLS++E+VKAFG  GSILPFYKAHYGMAHAD + DG+I+E+ELDKLV+YA+KFQHKR C
Subjt:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC

A0A5A7UYC0 Putative calcium-binding protein CML103.2e-3583.91Show/hide
Query:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC
        MSRA+SKL+ SRED+KEIFREHDIDGDGRLS+SE+VKAFGF GSILPFYKAHYGMAHAD + DGYI+E+ELDKLV+YAEKFQHKR C
Subjt:  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC

A0A5A7V2Z9 Putative calcium-binding protein CML102.2e-2372Show/hide
Query:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK
        SK  FSRE++KEIFREHDIDGDG LSI EL+KA GFLG  +PFYKAHYGMA++D + DG I EDELDKL++YAE+
Subjt:  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK

A0A6J1CSH1 probable calcium-binding protein CML152.8e-2369.23Show/hide
Query:  RASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK
        + + K+KFSR  +KEIF EHDIDGDG LS+SEL+KAF FLGS++P YKAHYG+A AD D DG I E+ELDKLV+YAEK
Subjt:  RASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK

SwissProt top hitse value%identityAlignment
P94092 Polcalcin Cyn d 78.3e-0442.11Show/hide
Query:  DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE
        D++ IF+  D +GDG++S++EL  A   LGS     +    MA  D D DG+ID DE
Subjt:  DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE

Q84V36 Polcalcin Che a 38.3e-0443.86Show/hide
Query:  DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE
        D + IF+  D +GDG++S SEL  A   LGS+ P  +    MA  D D DG+I  DE
Subjt:  DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE

Q8RYJ9 Putative calcium-binding protein CML236.3e-0440Show/hide
Query:  EDVKEIFREHDIDGDGRLSISEL---VKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAE
        ++ + +F   D DGDG++S +EL   VKA   LG  +P  +    MA AD D DG +DE+E  +LV   E
Subjt:  EDVKEIFREHDIDGDGRLSISEL---VKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAE

Q8RZB5 Probable calcium-binding protein CML105.7e-0543.55Show/hide
Query:  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKL
        E+++ +FR+ D +GDGR+S SEL   F  LG      +    MA ADAD DG+I  DE   L
Subjt:  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKL

Q9NZT1 Calmodulin-like protein 57.5e-0533.33Show/hide
Query:  ASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLV
        A+ K +   ED++  FR  D DGDG +++ EL +A   LG  LP  +    +  AD D DG ++ +E  +++
Subjt:  ASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLV

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.0e-0433.87Show/hide
Query:  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKL
        E++K++F + D +GDG++S+ EL   F  +G+     + +  +   D D DGYI+ DE   L
Subjt:  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKL

AT1G18210.2 Calcium-binding EF-hand family protein1.0e-0433.87Show/hide
Query:  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKL
        E++K++F + D +GDG++S+ EL   F  +G+     + +  +   D D DGYI+ DE   L
Subjt:  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKL

AT1G66400.1 calmodulin like 231.3e-0432.86Show/hide
Query:  SREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK
        S ED+K++F+  D + DG++SI EL    G L       +    M   D D +G+ID DE   L + +++
Subjt:  SREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEK

AT1G76640.1 Calcium-binding EF-hand family protein7.7e-0533.33Show/hide
Query:  ASSKLKFSRE---DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKF
        +SS +KF  E   D++ +F   D + DGR+S  EL K+F  LG  +   +A   +  +D D DG +D +E   L++  ++F
Subjt:  ASSKLKFSRE---DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKF

AT3G50770.1 calmodulin-like 412.9e-0435.19Show/hide
Query:  SREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDG
        S+E+++++F   D DGDG++S  EL   FG +G  +    A   +   D D DG
Subjt:  SREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACGTGCATCAAGCAAGTTAAAGTTCTCTAGGGAGGATGTGAAGGAGATTTTCAGAGAACACGACATCGACGGAGATGGTCGATTGAGCATAAGCGAGTTGGTGAA
GGCCTTCGGGTTCTTAGGCAGCATTCTTCCTTTCTACAAAGCTCACTACGGAATGGCTCATGCTGATGCTGATGACGATGGCTACATTGATGAGGACGAGCTCGACAAGC
TCGTTGAGTATGCCGAGAAATTTCAGCACAAGAGGCACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACGTGCATCAAGCAAGTTAAAGTTCTCTAGGGAGGATGTGAAGGAGATTTTCAGAGAACACGACATCGACGGAGATGGTCGATTGAGCATAAGCGAGTTGGTGAA
GGCCTTCGGGTTCTTAGGCAGCATTCTTCCTTTCTACAAAGCTCACTACGGAATGGCTCATGCTGATGCTGATGACGATGGCTACATTGATGAGGACGAGCTCGACAAGC
TCGTTGAGTATGCCGAGAAATTTCAGCACAAGAGGCACTGTTGA
Protein sequenceShow/hide protein sequence
MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC